kegg
Here are 56 public repositories matching this topic...
📊 A universal enrichment tool for interpreting omics data
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Oct 7, 2024 - R
Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
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Oct 10, 2024 - Visual Basic .NET
A Java-based software for visualizing and translating the KEGG PATHWAY database. Conversion of KGML files into BioPAX, SBML, GraphML, GML, and various other formats.
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Jun 26, 2023 - Java
Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)
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Jan 21, 2022 - R
GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
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Oct 30, 2020 - Perl
A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
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Jan 27, 2020 - R
PETAL (ParallEl paThways AnaLyzer): a Python tool for deep biological pathway analysis
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Dec 28, 2022 - Python
A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries
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Jan 22, 2020 - R
An interactive radial tree for functional hierarchies and omics data visualization
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Nov 22, 2022 - HTML
KEGG Module Evaluation Tool
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Nov 15, 2023 - Python
Utilizing graphical neural networks and embeddings on a medical database KEGG to perform link predictions and drug similarity systems.
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Oct 2, 2021 - Jupyter Notebook
A comprehensive gene set function enrichment tool for multiple species.
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Mar 23, 2020 - Shell
A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.
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Jul 22, 2023 - Python
A Bio2BEL package for integrating pathway-related information from KEGG in BEL
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Feb 11, 2022 - Python
Function Enrichment analysis and Network construction
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Oct 9, 2024 - R
Drawing chemical compound structures and glycan structures with capabilities to search against the KEGG databases
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Jun 5, 2024 - Visual Basic .NET
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