A bash script for an automated Rosetta Abinitio folding simulation on an HPC
A proof-of-concept for using AlphaFold with new amino acid sequences (this may change to a full project in the future).
Code used for our paper, Variable Regions of p53 Isoforms Allosterically Hard Code DNA Interaction
Step-by-step guide to install and configure AlphaFold 3 using a Conda Python 3.11 environment. No system-wide installations required. ✅ Miniconda setup & dependencies ✅ Repository cloning & model setup ✅ Database configuration & execution script 🔹 Requirements: Linux, NVIDIA GPU (Ampere+), CUDA, ~700GB disk space.
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