3D medical imaging reconstruction software

Tomographic Reconstruction in Python

TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox

Operator Discretization Library https://odlgroup.github.io/odl/

A set of tools for characterizing and analyzing 3D images of porous materials

Python based toolkit for Electrical Impedance Tomography

Cross platform, open source application for the processing, visualization, and analysis of 3D tomography data

Python based dashboard for real-time Electrical Impedance Tomography including image reconstruction using Back Projection, Graz Consensus and Gauss Newton methods

A python implementation of Gate Set Tomography

Software to generate 2D/3D/4D analytical phantoms and their Radon transforms (parallel beam) for image processing

Computational Tomography in PyTorch

A versatile python framework for tomographic imaging

A tutorial for Synthetic Aperture Radar Tomography

Learned Primal-Dual Reconstruction

A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.

MATLAB package of iterative regularization methods and large-scale test problems. This software is described in the paper "IR Tools: A MATLAB Package of Iterative Regularization Methods and Large-Scale Test Problems" that will be published in Numerical Algorithms, 2018.

Solving ill-posed inverse problems using iterative deep neural networks

A multi-resolution seismic attenuation tomography code - currently in its 3.0 release

MIRT: Michigan Image Reconstruction Toolbox (Julia version)

Electron/X-ray ptychography and tomography/laminography