Introduction: Estrogen receptor gene (ESR1) drives approximately 70-80% of breast cancer cases, w... more Introduction: Estrogen receptor gene (ESR1) drives approximately 70-80% of breast cancer cases, which are primarily treated with endocrine therapies. Mutations in the ESR1 exclusively occur in the ligand binding domain (LBD) and are significantly enriched following endocrine therapy. These mutations retain the estrogen receptor (ER) expression thus conferring ligand-independent growth, which is a paramount contributor to endocrine therapy resistant disease. Worse progression-free survival is consistently associated with ESR1 mutation status; therefore, there is an unmet need for therapies against these mutations. To this end, we recently developed TX-245, a bis-benzamide molecule that hampers the function of the two most common ESR1 mutations - Y537S and D538G. Methods: TX-245 was evaluated in vitro using MTT cell proliferation assay and colony formation assay carried out in multiple ER+ breast cancer cells harboring wild type (WT) ESR1 or mutant (MT) ESR1. Approaches such as tumor spheroid cultures were also implemented to study the effect of TX-245 compared to selected SERDs/SERMs via CellTiter-Glo 3D viability assay. Mechanistic insights were obtained performing TR-FRET assay, fluorescence polarization assay, RNA-seq, ChIP-seq, western blot, and qRT-PCR. The therapeutic efficacy in vivo was evaluated using cell xenografts, patient derived xenografts (PDX), patient derived explants (PDE), and metastatic mouse models of MT-ER breast cancer. Results: TX-245 demonstrated greater anti-proliferative dose-dependent activity in models harboring WT and MT ESR1, including those resistant to fulvestrant and tamoxifen, when compared to other SERDs/SERMs. RNAseq data suggests that TX-245 dramatically alters the transcription of ERα-regulated genes, with repression of canonical estradiol-upregulated and induction of estradiol-repressed genes. TX-245 was able to antagonize ER-chromatin interaction and ER-transcriptional signaling in breast cancer cells driven by ESR1 mutation. TX-245 treatment downregulated ER protein expression and decreased expression of ER targeted genes (i.e., GREB and PGR) in multiple ER+ cell lines. TX-245 treatment as a single agent or in combination with palbociclib resulted in tumor regression in xenografts expressing WT, Y537S or D538G ESR1 mutation. PDX and PDE models consistently exhibited substantial tumor growth inhibition as well as decreased proliferation (Ki67 staining). Metastases studies using intracardiac and intratibial injection demonstrated that TX-245 inhibited the progression of established metastatic niches in mice injected with Y537S or D538G ER+ breast cancer cells. Conclusion: Our results indicate that TX-245 inhibits cell proliferation in cell lines that express WT or mutant ESR1, induce ER degradation, suppress ER-mediated signaling and reduce tumor burden in mouse models. These studies highlight the utility of TX-245 in targeting mutations in the ER-LBD. Citation Format: Karla Parra, Suryavathi Viswanadhapalli, Tanner Reese, Xihui Liu, JunHao Liu, Zexuan Liu, Tae-Kyung Lee, Chia Yuan Chen, Kara Kassees, Jung-Mo Ahn, Ratna Vadlamudi, Ganesh Raj, Carlos Roggero. Targeting the mutant estrogen receptor in metastatic breast cancer [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2023; Part 1 (Regular and Invited Abstracts); 2023 Apr 14-19; Orlando, FL. Philadelphia (PA): AACR; Cancer Res 2023;83(7_Suppl):Abstract nr 3440.
<div><p>(A) Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 m... more <div><p>(A) Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 min at 37 °C to chelate intra-acrosomal Ca<sup>2+</sup>. AE was then initiated by adding 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>). After 15 min incubation at 37 °C to allow exocytosis to proceed to the intra-acrosomal Ca<sup>2+</sup>-sensitive step, 800 nM recombinant SNAP25 (SNAP25) was added to compete with endogenous SNAP25. Intra-acrosomal Ca<sup>2+</sup> was replenished by photolysis of NP-EGTA-AM (hν), and the samples were incubated for 5 min to promote exocytosis (NP→Ca<sup>2+</sup>→SNAP25→hν, black bar). Sperm were then fixed and AE was measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>.</p> <p>(B) Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 min at 37 °C. AE was then initiated by adding 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>) or 300 nM Rab3A (Rab3A). After 15 min incubation at 37 °C, 100 nM neurotoxin recognizing VAMP (BoNT/B and TeTx) was added to the tubes to assess whether the SNAREs had reassembled in loose <i>trans</i> complexes sensitive to BoNT/B but not to TeTx. After 15 min incubation at 37 °C, intra-acrosomal Ca<sup>2+</sup> was replenished by photolysis of NP-EGTA-AM (hν), and the samples were incubated for 5 min to promote exocytosis (NP→Ca<sup>2+</sup>/Rab3A→neurotoxin→hν, black bars). Sperm were then fixed and AE measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>.</p> <p>(C) To assess whether NSF/α-SNAP can disassemble loose <i>trans</i> SNARE complexes, permeabilized sperm treated as in (B) were incubated with TeTx in the presence of 310 nM NSF and 500 nM α-SNAP (NP→Ca<sup>2+</sup>/Rab3A→NSF/αS+TeTx→hν, black bars).</p> <p>Several controls were included in (A), (B), and (C) (grey bars): background AE in the absence of any stimulation (control); AE stimulated by 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>) or 300 nM Rab3A (Rab3A); inhibitory effect of NP-EGTA-AM in the dark (NP→Ca<sup>2+</sup>/Rab3A→dark) and the recovery upon illumination (NP→Ca<sup>2+</sup>/Rab3A→hν); inhibitory effect when SNAP25 was present throughout the incubations (NP→SNAP25→Ca<sup>2+</sup>→hν); inhibitory effect when the neurotoxins were present throughout the incubations (NP→neurotoxin→Ca<sup>2+</sup>/Rab3A→hν); and the effect of NSF/α-SNAP on SNARE complexes in unstimulated sperm (NSF/αS+TeTx→TPEN→Rab3A→hν). The data were normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a> (mean ± SEM). Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st007" target="_blank">Table S7</a>.</p></div
<p>Permeabilized spermatozoa were loaded with 10 μM BAPTA-AM (B-AM) for 15 min at 37 °C to ... more <p>Permeabilized spermatozoa were loaded with 10 μM BAPTA-AM (B-AM) for 15 min at 37 °C to chelate intra-acrosomal Ca<sup>2+</sup>. AE was then initiated by adding 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>). After 15 min incubation at 37 °C to allow exocytosis to proceed to the intra-acrosomal Ca<sup>2+</sup>-sensitive step, 100 nM neurotoxins recognizing VAMP (BoNT/B or TeTx) were added to the tubes and the samples were incubated for 15 min at 37 °C (B-AM→Ca<sup>2+</sup>→neurotoxin, black bars). Samples were then immunolabeled with an anti-VAMP2 antibody as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>. Notice that at this stage VAMP2 immunolabeling was sensitive to BoNT/B but not to TeTx. Several other conditions are included (grey bars). The toxins did not affect VAMP2 staining in resting sperm (compare control versus B-AM→neurotoxin). However, the toxins decreased the VAMP2 labeling when present during stimulation (B-AM→neurotoxin→Ca<sup>2+</sup>). Fluorescence was normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a> (mean ± SEM). Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st008" target="_blank">Table S8</a>.</p
<p>Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 min at 37 °C to ... more <p>Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 min at 37 °C to chelate intra-acrosomal Ca<sup>2+</sup>. AE was then initiated by adding 0.5 mM CaCl<sub>2</sub> (10 μM free Ca<sup>2+</sup>)(Ca<sup>2+</sup>). After further 15 min incubation at 37 °C to allow exocytosis to proceed up to the intra-acrosomal Ca<sup>2+</sup>-sensitive step, sperm were treated for 15 min at 37 °C with antibodies that recognize Rab3A (20 μg/ml, anti-Rab3A), SNAP25 (20 μg/ml, anti-SNAP25), syntaxin1A (1/25 dilution, anti-Stx1A), VAMP2 (20 μg/ml, anti-VAMP2), or synaptotagmin VI (30 μg/ml, anti-StgVI). All these procedures were carried out in the dark. UV flash photolysis of the chelator was induced at the end of the incubation period (hν), and the samples were incubated for 5 min to promote exocytosis (NP→Ca<sup>2+</sup>→antibody→hν, black bars; a diagram of the experiment is shown at the top of the figure). Sperm were then fixed and AE was measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>. Several controls were included (grey bars): background AE in the absence of any stimulation (control); AE stimulated by 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>), inhibitory effect of NP-EGTA-AM in the dark (NP→Ca<sup>2+</sup>→dark), and the recovery upon illumination (NP→Ca<sup>2+</sup>→hν); and inhibitory effect of the antibodies when present throughout the experiment (NP→antibody→Ca<sup>2+</sup>→hν). The data were normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a> (mean ± SEM). Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st002" target="_blank">Table S2</a>.</p
<div><p>(A) Permeabilized spermatozoa were incubated for 15 min at 37 °C with increas... more <div><p>(A) Permeabilized spermatozoa were incubated for 15 min at 37 °C with increasing concentrations of BoNT/C (black circles, wild type; grey circles, EA, a protease-inactive mutant) and then stimulated with 10 μM Ca<sup>2+</sup> for 15 min at 37 °C. Afterwards, sperm were fixed and AE measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>.</p> <p>(B) To assess the assembly state of syntaxin1A, sperm were incubated with 100 nM BoNT/C (15 min at 37 °C), and the cells were then fixed and immunostained with an anti-syntaxin1A antibody recognizing an epitope that is cleaved by the toxin. To prevent AE, which would release syntaxin into the medium by vesiculation of the acrosome, intra-acrosomal Ca<sup>2+</sup> was chelated with 10 μM BAPTA-AM (15 min at 37 °C, B-AM). The toxin treatment in resting sperm (BoNT/C) or B-AM-loaded sperm (B-AM→BoNT/C) had no effect on the syntaxin labeling compared to untreated sperm (control). However, when 310 nM NSF and 500 nM α-SNAP were added to the system to promote the disassembly of SNARE complexes, the toxin significantly decreased the syntaxin labeling (B-AM→NSF/αS→BoNT/C). The BoNT/C treatment also affected syntaxin labeling when sperm were stimulated for 15 min at 37 °C with 10 μM free Ca<sup>2+</sup> (B-AM→ BoNT/C→Ca<sup>2+</sup>) or 300 nM Rab3A (B-AM→BoNT/C→Rab3A). The protease-inactive mutant did not affect labeling under these conditions (B-AM→BoNT/C-EA→Ca<sup>2+</sup>). Fluorescence was normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>. The data represent the mean ± SEM. Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st005" target="_blank">Table S5</a>.</p></div
<p>Sperm were incubated with 100 nM BoNT/C (15 min at 37 °C) as explained in <a href=&qu... more <p>Sperm were incubated with 100 nM BoNT/C (15 min at 37 °C) as explained in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#pbio-0030323-g004" target="_blank">Figure 4</a>. The cells were then fixed and triple-stained with an anti-syntaxin1A antibody that recognizes an epitope trimmed by the toxin (red; [A, D, G, and J]), FITC-PSA to differentiate between reacted and intact sperm (green; [B, E, H, and K]), and Hoechst 33258 to visualize all cells in the field (blue; [C, F, I, and L]). Notice that spontaneously reacted sperm were negative for syntaxin1A staining (arrowheads in [D] and [E]). BoNT/C had no effect on resting sperm (compare [A–C] with [D–F]). However, labeling in sperm stimulated with 10 μM Ca<sup>2+</sup> in the presence of BAPTA-AM to prevent exocytosis (observe that PSA staining is not affected) was significantly reduced by the toxin (asterisks, [G]). In contrast, the same experimental condition in the presence of the protease-inactive toxin (BoNT/C-EA) had no effect (J–L). Bars = 5 μm.</p
<div><p>(A) Permeabilized spermatozoa were treated at 37 °C for 15 min with 357 nM Bo... more <div><p>(A) Permeabilized spermatozoa were treated at 37 °C for 15 min with 357 nM BoNT/E, 100 nM BoNT/B, or 100 nM TeTx. Next, 2.5 μM TPEN (see [B]) was added and AE was activated by adding 0.5 mM CaCl<sub>2</sub> (10 μM free Ca<sup>2+</sup>) and the incubation continued for an additional 15 min (black bars). Sperm were then fixed and AE was measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>. Several controls were included (grey bars): background AE in the absence of any stimulation (control); AE stimulated by 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>); TPEN effect on exocytosis (TPEN→Ca<sup>2+</sup>); inhibitory effect of the neurotoxins on exocytosis (neurotoxin→Ca<sup>2+</sup>); and block of neurotoxin activity by TPEN (TPEN→neurotoxin→Ca<sup>2+</sup>).</p> <p>(B) Recombinant SNAP25 (0.7 μg) was incubated for 15 min at 37 °C in the presence of 0.6 μg of BoNT/E and increasing concentrations of TPEN. Samples were then resolved by SDS-PAGE and stained with Coomassie blue. Molecular weight standards are indicated on the left (in kilodaltons). Densitometry and quantitation of the stained bands show 100%, 7%, 92%, 98%, 100%, and 100% of intact SNAP25 in lanes 1–6 (from left to right), respectively.</p> <p>(C) Treatment with TeTx was performed as described in (A), in the presence of 310 nM NSF and 500 nM α-SNAP (NSF/αS) to promote SNARE complex dissociation (black bar). Incubation with NSF/α-SNAP in the presence of TPEN-inactivated toxin did not affect exocytosis (grey bar).</p> <p>The data in (A) and (C) were normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a> (mean ± SEM). Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st003" target="_blank">Table S3</a>.</p></div
<p>Sperm were incubated with 100 nM BoNT/B or TeTx (15 min at 37 °C) as described in <a ... more <p>Sperm were incubated with 100 nM BoNT/B or TeTx (15 min at 37 °C) as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#pbio-0030323-g008" target="_blank">Figure 8</a>. The cells were then triple-stained with an anti-VAMP2 antibody that recognizes an epitope that is cleaved by the toxin (red; [A, D, G, J, M, P, and S]), FITC-PSA to differentiate between reacted and intact sperm (green; [B, E, H, K, N, Q, and T]), and Hoechst 33258 to visualize all cells in the field (blue; [C, F, I, L, O, R, and U]). BoNT/B and TeTx had no effect on resting sperm (compare [D–F] and [M–O] with [A–C]). However, labeling in sperm stimulated with 10 μM Ca<sup>2+</sup> in the presence of BAPTA-AM to prevent exocytosis (observe that the PSA staining is not affected) was significantly reduced by the toxins (asterisks, [G] and [P]). In contrast, when cells were first allowed to arrive at the intra-acrosomal Ca<sup>2+</sup>-sensitive step and then treated with toxins, BoNT/B caused a significant decrease of the VAMP2 label (asterisks, [J]), whereas TeTx had no effect (S). Bars = 5 μm.</p
<p>The resistance to neurotoxin proteolysis is indicated as determined experimentally here.... more <p>The resistance to neurotoxin proteolysis is indicated as determined experimentally here. The block by intra-acrosomal Ca<sup>2+</sup> chelators is marked in red. OAM, outer acrosomal membrane; PM, plasma membrane. See text for more details (SNARE drawings were modified from [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#pbio-0030323-b04" target="_blank">4</a>]).</p
Triple-negative breast cancer (TNBC) has a poor clinical outcome, due to a lack of actionable the... more Triple-negative breast cancer (TNBC) has a poor clinical outcome, due to a lack of actionable therapeutic targets. Herein we define lysosomal acid lipase A (LIPA) as a viable molecular target in TNBC and identify a stereospecific small molecule (ERX-41) that binds LIPA. ERX-41 induces endoplasmic reticulum (ER) stress resulting in cell death, and this effect is on target as evidenced by specific LIPA mutations providing resistance. Importantly, we demonstrate that ERX-41 activity is independent of LIPA lipase function but dependent on its ER localization. Mechanistically, ERX-41 binding of LIPA decreases expression of multiple ER-resident proteins involved in protein folding. This targeted vulnerability has a large therapeutic window, with no adverse effects either on normal mammary epithelial cells or in mice. Our study implicates a targeted strategy for solid tumors, including breast, brain, pancreatic and ovarian, whereby small, orally bioavailable molecules targeting LIPA block ...
The androgen receptor (AR) plays a central role in prostate cancer. Development of castration res... more The androgen receptor (AR) plays a central role in prostate cancer. Development of castration resistant prostate cancer (CRPC) requires androgen-independent activation of AR, which involves its large N-terminal domain (NTD) and entails dramatic epigenetic changes depending in part on histone lysine demethylases (KDMs) that interact with AR. The AR-NTD is rich in low-complexity sequences, including a polyQ repeat. Longer polyQ sequences were reported to decrease transcriptional activity and to protect against prostate cancer. However, the molecular mechanisms underlying these observations are unclear. Using NMR spectroscopy, here we identify weak interactions between the AR-NTD and the KDM4A catalytic domain, and between the AR ligand-binding domain and a central KDM4A region that also contains low-complexity sequences. We also show that the AR-NTD can undergo liquid-liquid phase separation in vitro, with longer polyQ sequences phase separating more readily. Moreover, longer polyQ se...
Alternative splicing is emerging as an oncogenic mechanism. In prostate cancer, generation of con... more Alternative splicing is emerging as an oncogenic mechanism. In prostate cancer, generation of constitutively active forms of androgen receptor (AR) variants including AR-V7 plays an important role in progression of castration-resistant prostate cancer (CRPC). AR-V7 is generated by alternative splicing that results in inclusion of cryptic exon CE3 and translation of truncated AR protein that lacks the ligand binding domain. Whether AR-V7 can be a driver for CRPC remains controversial as the oncogenic mechanism of AR-V7 activation remains elusive. Here, we found that KDM4B promotes AR-V7 and identified a novel regulatory mechanism. KDM4B is phosphorylated by protein kinase A under conditions that promote castration-resistance, eliciting its binding to the splicing factor SF3B3. KDM4B binds RNA specifically near the 5′-CE3, upregulates the chromatin accessibility, and couples the spliceosome to the chromatin. Our data suggest that KDM4B can function as a signal responsive trans-acting ...
Rapid and efficient synaptic vesicle fusion requires a pool of primed vesicles, the nearby tether... more Rapid and efficient synaptic vesicle fusion requires a pool of primed vesicles, the nearby tethering of Ca channels, and the presence of the phospholipid PIP in the target membrane. Although the presynaptic active zone mediates the first two requirements, it is unclear how fusion is targeted to membranes with high PIP content. Here we find that the CB domain of the active zone scaffold RIM is critical for action potential-triggered fusion. Remarkably, the known RIM functions in vesicle priming and Ca influx do not require RIM CB domains. Instead, biophysical experiments reveal that RIM C domains, which lack Ca binding, specifically bind to PIP. Mutational analyses establish that PIP binding to RIM CB and its tethering to the other RIM domains are crucial for efficient exocytosis. We propose that RIM CB domains are constitutive PIP-binding modules that couple mechanisms for vesicle priming and Ca channel tethering to PIP-containing target membranes.
Introduction: Estrogen receptor gene (ESR1) drives approximately 70-80% of breast cancer cases, w... more Introduction: Estrogen receptor gene (ESR1) drives approximately 70-80% of breast cancer cases, which are primarily treated with endocrine therapies. Mutations in the ESR1 exclusively occur in the ligand binding domain (LBD) and are significantly enriched following endocrine therapy. These mutations retain the estrogen receptor (ER) expression thus conferring ligand-independent growth, which is a paramount contributor to endocrine therapy resistant disease. Worse progression-free survival is consistently associated with ESR1 mutation status; therefore, there is an unmet need for therapies against these mutations. To this end, we recently developed TX-245, a bis-benzamide molecule that hampers the function of the two most common ESR1 mutations - Y537S and D538G. Methods: TX-245 was evaluated in vitro using MTT cell proliferation assay and colony formation assay carried out in multiple ER+ breast cancer cells harboring wild type (WT) ESR1 or mutant (MT) ESR1. Approaches such as tumor spheroid cultures were also implemented to study the effect of TX-245 compared to selected SERDs/SERMs via CellTiter-Glo 3D viability assay. Mechanistic insights were obtained performing TR-FRET assay, fluorescence polarization assay, RNA-seq, ChIP-seq, western blot, and qRT-PCR. The therapeutic efficacy in vivo was evaluated using cell xenografts, patient derived xenografts (PDX), patient derived explants (PDE), and metastatic mouse models of MT-ER breast cancer. Results: TX-245 demonstrated greater anti-proliferative dose-dependent activity in models harboring WT and MT ESR1, including those resistant to fulvestrant and tamoxifen, when compared to other SERDs/SERMs. RNAseq data suggests that TX-245 dramatically alters the transcription of ERα-regulated genes, with repression of canonical estradiol-upregulated and induction of estradiol-repressed genes. TX-245 was able to antagonize ER-chromatin interaction and ER-transcriptional signaling in breast cancer cells driven by ESR1 mutation. TX-245 treatment downregulated ER protein expression and decreased expression of ER targeted genes (i.e., GREB and PGR) in multiple ER+ cell lines. TX-245 treatment as a single agent or in combination with palbociclib resulted in tumor regression in xenografts expressing WT, Y537S or D538G ESR1 mutation. PDX and PDE models consistently exhibited substantial tumor growth inhibition as well as decreased proliferation (Ki67 staining). Metastases studies using intracardiac and intratibial injection demonstrated that TX-245 inhibited the progression of established metastatic niches in mice injected with Y537S or D538G ER+ breast cancer cells. Conclusion: Our results indicate that TX-245 inhibits cell proliferation in cell lines that express WT or mutant ESR1, induce ER degradation, suppress ER-mediated signaling and reduce tumor burden in mouse models. These studies highlight the utility of TX-245 in targeting mutations in the ER-LBD. Citation Format: Karla Parra, Suryavathi Viswanadhapalli, Tanner Reese, Xihui Liu, JunHao Liu, Zexuan Liu, Tae-Kyung Lee, Chia Yuan Chen, Kara Kassees, Jung-Mo Ahn, Ratna Vadlamudi, Ganesh Raj, Carlos Roggero. Targeting the mutant estrogen receptor in metastatic breast cancer [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2023; Part 1 (Regular and Invited Abstracts); 2023 Apr 14-19; Orlando, FL. Philadelphia (PA): AACR; Cancer Res 2023;83(7_Suppl):Abstract nr 3440.
<div><p>(A) Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 m... more <div><p>(A) Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 min at 37 °C to chelate intra-acrosomal Ca<sup>2+</sup>. AE was then initiated by adding 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>). After 15 min incubation at 37 °C to allow exocytosis to proceed to the intra-acrosomal Ca<sup>2+</sup>-sensitive step, 800 nM recombinant SNAP25 (SNAP25) was added to compete with endogenous SNAP25. Intra-acrosomal Ca<sup>2+</sup> was replenished by photolysis of NP-EGTA-AM (hν), and the samples were incubated for 5 min to promote exocytosis (NP→Ca<sup>2+</sup>→SNAP25→hν, black bar). Sperm were then fixed and AE was measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>.</p> <p>(B) Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 min at 37 °C. AE was then initiated by adding 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>) or 300 nM Rab3A (Rab3A). After 15 min incubation at 37 °C, 100 nM neurotoxin recognizing VAMP (BoNT/B and TeTx) was added to the tubes to assess whether the SNAREs had reassembled in loose <i>trans</i> complexes sensitive to BoNT/B but not to TeTx. After 15 min incubation at 37 °C, intra-acrosomal Ca<sup>2+</sup> was replenished by photolysis of NP-EGTA-AM (hν), and the samples were incubated for 5 min to promote exocytosis (NP→Ca<sup>2+</sup>/Rab3A→neurotoxin→hν, black bars). Sperm were then fixed and AE measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>.</p> <p>(C) To assess whether NSF/α-SNAP can disassemble loose <i>trans</i> SNARE complexes, permeabilized sperm treated as in (B) were incubated with TeTx in the presence of 310 nM NSF and 500 nM α-SNAP (NP→Ca<sup>2+</sup>/Rab3A→NSF/αS+TeTx→hν, black bars).</p> <p>Several controls were included in (A), (B), and (C) (grey bars): background AE in the absence of any stimulation (control); AE stimulated by 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>) or 300 nM Rab3A (Rab3A); inhibitory effect of NP-EGTA-AM in the dark (NP→Ca<sup>2+</sup>/Rab3A→dark) and the recovery upon illumination (NP→Ca<sup>2+</sup>/Rab3A→hν); inhibitory effect when SNAP25 was present throughout the incubations (NP→SNAP25→Ca<sup>2+</sup>→hν); inhibitory effect when the neurotoxins were present throughout the incubations (NP→neurotoxin→Ca<sup>2+</sup>/Rab3A→hν); and the effect of NSF/α-SNAP on SNARE complexes in unstimulated sperm (NSF/αS+TeTx→TPEN→Rab3A→hν). The data were normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a> (mean ± SEM). Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st007" target="_blank">Table S7</a>.</p></div
<p>Permeabilized spermatozoa were loaded with 10 μM BAPTA-AM (B-AM) for 15 min at 37 °C to ... more <p>Permeabilized spermatozoa were loaded with 10 μM BAPTA-AM (B-AM) for 15 min at 37 °C to chelate intra-acrosomal Ca<sup>2+</sup>. AE was then initiated by adding 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>). After 15 min incubation at 37 °C to allow exocytosis to proceed to the intra-acrosomal Ca<sup>2+</sup>-sensitive step, 100 nM neurotoxins recognizing VAMP (BoNT/B or TeTx) were added to the tubes and the samples were incubated for 15 min at 37 °C (B-AM→Ca<sup>2+</sup>→neurotoxin, black bars). Samples were then immunolabeled with an anti-VAMP2 antibody as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>. Notice that at this stage VAMP2 immunolabeling was sensitive to BoNT/B but not to TeTx. Several other conditions are included (grey bars). The toxins did not affect VAMP2 staining in resting sperm (compare control versus B-AM→neurotoxin). However, the toxins decreased the VAMP2 labeling when present during stimulation (B-AM→neurotoxin→Ca<sup>2+</sup>). Fluorescence was normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a> (mean ± SEM). Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st008" target="_blank">Table S8</a>.</p
<p>Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 min at 37 °C to ... more <p>Permeabilized spermatozoa were loaded with 10 μM NP-EGTA-AM (NP) for 15 min at 37 °C to chelate intra-acrosomal Ca<sup>2+</sup>. AE was then initiated by adding 0.5 mM CaCl<sub>2</sub> (10 μM free Ca<sup>2+</sup>)(Ca<sup>2+</sup>). After further 15 min incubation at 37 °C to allow exocytosis to proceed up to the intra-acrosomal Ca<sup>2+</sup>-sensitive step, sperm were treated for 15 min at 37 °C with antibodies that recognize Rab3A (20 μg/ml, anti-Rab3A), SNAP25 (20 μg/ml, anti-SNAP25), syntaxin1A (1/25 dilution, anti-Stx1A), VAMP2 (20 μg/ml, anti-VAMP2), or synaptotagmin VI (30 μg/ml, anti-StgVI). All these procedures were carried out in the dark. UV flash photolysis of the chelator was induced at the end of the incubation period (hν), and the samples were incubated for 5 min to promote exocytosis (NP→Ca<sup>2+</sup>→antibody→hν, black bars; a diagram of the experiment is shown at the top of the figure). Sperm were then fixed and AE was measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>. Several controls were included (grey bars): background AE in the absence of any stimulation (control); AE stimulated by 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>), inhibitory effect of NP-EGTA-AM in the dark (NP→Ca<sup>2+</sup>→dark), and the recovery upon illumination (NP→Ca<sup>2+</sup>→hν); and inhibitory effect of the antibodies when present throughout the experiment (NP→antibody→Ca<sup>2+</sup>→hν). The data were normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a> (mean ± SEM). Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st002" target="_blank">Table S2</a>.</p
<div><p>(A) Permeabilized spermatozoa were incubated for 15 min at 37 °C with increas... more <div><p>(A) Permeabilized spermatozoa were incubated for 15 min at 37 °C with increasing concentrations of BoNT/C (black circles, wild type; grey circles, EA, a protease-inactive mutant) and then stimulated with 10 μM Ca<sup>2+</sup> for 15 min at 37 °C. Afterwards, sperm were fixed and AE measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>.</p> <p>(B) To assess the assembly state of syntaxin1A, sperm were incubated with 100 nM BoNT/C (15 min at 37 °C), and the cells were then fixed and immunostained with an anti-syntaxin1A antibody recognizing an epitope that is cleaved by the toxin. To prevent AE, which would release syntaxin into the medium by vesiculation of the acrosome, intra-acrosomal Ca<sup>2+</sup> was chelated with 10 μM BAPTA-AM (15 min at 37 °C, B-AM). The toxin treatment in resting sperm (BoNT/C) or B-AM-loaded sperm (B-AM→BoNT/C) had no effect on the syntaxin labeling compared to untreated sperm (control). However, when 310 nM NSF and 500 nM α-SNAP were added to the system to promote the disassembly of SNARE complexes, the toxin significantly decreased the syntaxin labeling (B-AM→NSF/αS→BoNT/C). The BoNT/C treatment also affected syntaxin labeling when sperm were stimulated for 15 min at 37 °C with 10 μM free Ca<sup>2+</sup> (B-AM→ BoNT/C→Ca<sup>2+</sup>) or 300 nM Rab3A (B-AM→BoNT/C→Rab3A). The protease-inactive mutant did not affect labeling under these conditions (B-AM→BoNT/C-EA→Ca<sup>2+</sup>). Fluorescence was normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>. The data represent the mean ± SEM. Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st005" target="_blank">Table S5</a>.</p></div
<p>Sperm were incubated with 100 nM BoNT/C (15 min at 37 °C) as explained in <a href=&qu... more <p>Sperm were incubated with 100 nM BoNT/C (15 min at 37 °C) as explained in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#pbio-0030323-g004" target="_blank">Figure 4</a>. The cells were then fixed and triple-stained with an anti-syntaxin1A antibody that recognizes an epitope trimmed by the toxin (red; [A, D, G, and J]), FITC-PSA to differentiate between reacted and intact sperm (green; [B, E, H, and K]), and Hoechst 33258 to visualize all cells in the field (blue; [C, F, I, and L]). Notice that spontaneously reacted sperm were negative for syntaxin1A staining (arrowheads in [D] and [E]). BoNT/C had no effect on resting sperm (compare [A–C] with [D–F]). However, labeling in sperm stimulated with 10 μM Ca<sup>2+</sup> in the presence of BAPTA-AM to prevent exocytosis (observe that PSA staining is not affected) was significantly reduced by the toxin (asterisks, [G]). In contrast, the same experimental condition in the presence of the protease-inactive toxin (BoNT/C-EA) had no effect (J–L). Bars = 5 μm.</p
<div><p>(A) Permeabilized spermatozoa were treated at 37 °C for 15 min with 357 nM Bo... more <div><p>(A) Permeabilized spermatozoa were treated at 37 °C for 15 min with 357 nM BoNT/E, 100 nM BoNT/B, or 100 nM TeTx. Next, 2.5 μM TPEN (see [B]) was added and AE was activated by adding 0.5 mM CaCl<sub>2</sub> (10 μM free Ca<sup>2+</sup>) and the incubation continued for an additional 15 min (black bars). Sperm were then fixed and AE was measured as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a>. Several controls were included (grey bars): background AE in the absence of any stimulation (control); AE stimulated by 10 μM free Ca<sup>2+</sup> (Ca<sup>2+</sup>); TPEN effect on exocytosis (TPEN→Ca<sup>2+</sup>); inhibitory effect of the neurotoxins on exocytosis (neurotoxin→Ca<sup>2+</sup>); and block of neurotoxin activity by TPEN (TPEN→neurotoxin→Ca<sup>2+</sup>).</p> <p>(B) Recombinant SNAP25 (0.7 μg) was incubated for 15 min at 37 °C in the presence of 0.6 μg of BoNT/E and increasing concentrations of TPEN. Samples were then resolved by SDS-PAGE and stained with Coomassie blue. Molecular weight standards are indicated on the left (in kilodaltons). Densitometry and quantitation of the stained bands show 100%, 7%, 92%, 98%, 100%, and 100% of intact SNAP25 in lanes 1–6 (from left to right), respectively.</p> <p>(C) Treatment with TeTx was performed as described in (A), in the presence of 310 nM NSF and 500 nM α-SNAP (NSF/αS) to promote SNARE complex dissociation (black bar). Incubation with NSF/α-SNAP in the presence of TPEN-inactivated toxin did not affect exocytosis (grey bar).</p> <p>The data in (A) and (C) were normalized as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#s4" target="_blank">Materials and Methods</a> (mean ± SEM). Statistical analysis is provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#st003" target="_blank">Table S3</a>.</p></div
<p>Sperm were incubated with 100 nM BoNT/B or TeTx (15 min at 37 °C) as described in <a ... more <p>Sperm were incubated with 100 nM BoNT/B or TeTx (15 min at 37 °C) as described in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#pbio-0030323-g008" target="_blank">Figure 8</a>. The cells were then triple-stained with an anti-VAMP2 antibody that recognizes an epitope that is cleaved by the toxin (red; [A, D, G, J, M, P, and S]), FITC-PSA to differentiate between reacted and intact sperm (green; [B, E, H, K, N, Q, and T]), and Hoechst 33258 to visualize all cells in the field (blue; [C, F, I, L, O, R, and U]). BoNT/B and TeTx had no effect on resting sperm (compare [D–F] and [M–O] with [A–C]). However, labeling in sperm stimulated with 10 μM Ca<sup>2+</sup> in the presence of BAPTA-AM to prevent exocytosis (observe that the PSA staining is not affected) was significantly reduced by the toxins (asterisks, [G] and [P]). In contrast, when cells were first allowed to arrive at the intra-acrosomal Ca<sup>2+</sup>-sensitive step and then treated with toxins, BoNT/B caused a significant decrease of the VAMP2 label (asterisks, [J]), whereas TeTx had no effect (S). Bars = 5 μm.</p
<p>The resistance to neurotoxin proteolysis is indicated as determined experimentally here.... more <p>The resistance to neurotoxin proteolysis is indicated as determined experimentally here. The block by intra-acrosomal Ca<sup>2+</sup> chelators is marked in red. OAM, outer acrosomal membrane; PM, plasma membrane. See text for more details (SNARE drawings were modified from [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0030323#pbio-0030323-b04" target="_blank">4</a>]).</p
Triple-negative breast cancer (TNBC) has a poor clinical outcome, due to a lack of actionable the... more Triple-negative breast cancer (TNBC) has a poor clinical outcome, due to a lack of actionable therapeutic targets. Herein we define lysosomal acid lipase A (LIPA) as a viable molecular target in TNBC and identify a stereospecific small molecule (ERX-41) that binds LIPA. ERX-41 induces endoplasmic reticulum (ER) stress resulting in cell death, and this effect is on target as evidenced by specific LIPA mutations providing resistance. Importantly, we demonstrate that ERX-41 activity is independent of LIPA lipase function but dependent on its ER localization. Mechanistically, ERX-41 binding of LIPA decreases expression of multiple ER-resident proteins involved in protein folding. This targeted vulnerability has a large therapeutic window, with no adverse effects either on normal mammary epithelial cells or in mice. Our study implicates a targeted strategy for solid tumors, including breast, brain, pancreatic and ovarian, whereby small, orally bioavailable molecules targeting LIPA block ...
The androgen receptor (AR) plays a central role in prostate cancer. Development of castration res... more The androgen receptor (AR) plays a central role in prostate cancer. Development of castration resistant prostate cancer (CRPC) requires androgen-independent activation of AR, which involves its large N-terminal domain (NTD) and entails dramatic epigenetic changes depending in part on histone lysine demethylases (KDMs) that interact with AR. The AR-NTD is rich in low-complexity sequences, including a polyQ repeat. Longer polyQ sequences were reported to decrease transcriptional activity and to protect against prostate cancer. However, the molecular mechanisms underlying these observations are unclear. Using NMR spectroscopy, here we identify weak interactions between the AR-NTD and the KDM4A catalytic domain, and between the AR ligand-binding domain and a central KDM4A region that also contains low-complexity sequences. We also show that the AR-NTD can undergo liquid-liquid phase separation in vitro, with longer polyQ sequences phase separating more readily. Moreover, longer polyQ se...
Alternative splicing is emerging as an oncogenic mechanism. In prostate cancer, generation of con... more Alternative splicing is emerging as an oncogenic mechanism. In prostate cancer, generation of constitutively active forms of androgen receptor (AR) variants including AR-V7 plays an important role in progression of castration-resistant prostate cancer (CRPC). AR-V7 is generated by alternative splicing that results in inclusion of cryptic exon CE3 and translation of truncated AR protein that lacks the ligand binding domain. Whether AR-V7 can be a driver for CRPC remains controversial as the oncogenic mechanism of AR-V7 activation remains elusive. Here, we found that KDM4B promotes AR-V7 and identified a novel regulatory mechanism. KDM4B is phosphorylated by protein kinase A under conditions that promote castration-resistance, eliciting its binding to the splicing factor SF3B3. KDM4B binds RNA specifically near the 5′-CE3, upregulates the chromatin accessibility, and couples the spliceosome to the chromatin. Our data suggest that KDM4B can function as a signal responsive trans-acting ...
Rapid and efficient synaptic vesicle fusion requires a pool of primed vesicles, the nearby tether... more Rapid and efficient synaptic vesicle fusion requires a pool of primed vesicles, the nearby tethering of Ca channels, and the presence of the phospholipid PIP in the target membrane. Although the presynaptic active zone mediates the first two requirements, it is unclear how fusion is targeted to membranes with high PIP content. Here we find that the CB domain of the active zone scaffold RIM is critical for action potential-triggered fusion. Remarkably, the known RIM functions in vesicle priming and Ca influx do not require RIM CB domains. Instead, biophysical experiments reveal that RIM C domains, which lack Ca binding, specifically bind to PIP. Mutational analyses establish that PIP binding to RIM CB and its tethering to the other RIM domains are crucial for efficient exocytosis. We propose that RIM CB domains are constitutive PIP-binding modules that couple mechanisms for vesicle priming and Ca channel tethering to PIP-containing target membranes.
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Papers by Marcelo Roggero