University of Majmaah
Medical laboratories science
The development of fast, cost-effective, and “eco-friendly” method for the production of silver nanoparticles is an important aspect of nanotechnology today. In this paper, ten fungal strains isolated from marine sediment in Mediterranean... more
The development of fast, cost-effective, and “eco-friendly” method for the production of silver nanoparticles is an important aspect of nanotechnology today. In this paper, ten fungal strains isolated from marine sediment in Mediterranean Sea (Alexanderia) were screened for their abilities to synthesis silver nanoparticles. Aspergillus terreus MALEX was selected as the most active strain. The silver nanoparticles were characterized by UV–vis spectrophotometry, X-ray diffraction analysis, and Scanning electron microscopy (SEM). UV–visible spectrum of the aqueous medium containing silver ion showed a peak at 420 nm corresponding to the plasmon absorbance of silver nanoparticles. SEM studies showed formation of well-dispersed nanoparticles in the range of 15–29 nm and the shape of nanoparticles was spherical. The biosynthesized
silver nanoparticles exhibited high activities against four pathogenic bacterial strains (Staphylococcus aureus, Klebsiella pneumoniae, E. coli, and Salmonella sp.), four mycotoxigenic fungal strains (Fusarium solani, Alternaria alternata, Aspergillus flavus, A. ochraceus).
silver nanoparticles exhibited high activities against four pathogenic bacterial strains (Staphylococcus aureus, Klebsiella pneumoniae, E. coli, and Salmonella sp.), four mycotoxigenic fungal strains (Fusarium solani, Alternaria alternata, Aspergillus flavus, A. ochraceus).
- by Ahmed M Abdel-hadi and +1
- •
- Nanoparticles, Biosynthesis
A microarray analysis was used to examine the effect of combinations of water activity (aw, 0.995–0.90) and temperature (20–428C) on the activation of aflatoxin biosynthetic genes (30 genes) in Aspergillus flavus grown on a conducive YES... more
A microarray analysis was used to examine the effect of combinations of water activity
(aw, 0.995–0.90) and temperature (20–428C) on the activation of aflatoxin biosynthetic
genes (30 genes) in Aspergillus flavus grown on a conducive YES (20 g yeast extract, 150 g
sucrose, 1 g MgSO4.7H2O) medium. The relative expression of 10 key genes (aflF, aflD,
aflE, aflM, aflO, aflP, aflQ, aflX, aflR and aflS) in the biosynthetic pathway was examined
in relation to different environmental factors and phenotypic aflatoxin B1 (AFB1) production.
These data, plus data on relative growth rates and AFB1 production under different aw
temperature conditions were used to develop a mixed-growth-associated product formation
model. The gene expression data were normalized and then used as a linear combination of
the data for all 10 genes and combined with the physical model. This was used to relate
gene expression to aw and temperature conditions to predict AFB1 production. The relationship
between the observed AFB1 production provided a good linear regression fit to the
predicted production based in the model. The model was then validated by examining datasets
outside the model fitting conditions used (378C, 408C and different aw levels). The
relationship between structural genes (aflD, aflM) in the biosynthetic pathway and the regulatory
genes (aflS, aflJ) was examined in relation to aw and temperature by developing
ternary diagrams of relative expression. These findings are important in developing a more
integrated systems approach by combining gene expression, ecophysiological influences and
growth data to predict mycotoxin production. This could help in developing a more targeted
approach to develop prevention strategies to control such carcinogenic natural metabolites
that are prevalent in many staple food products. The model could also be used to predict
the impact of climate change on toxin production.
(aw, 0.995–0.90) and temperature (20–428C) on the activation of aflatoxin biosynthetic
genes (30 genes) in Aspergillus flavus grown on a conducive YES (20 g yeast extract, 150 g
sucrose, 1 g MgSO4.7H2O) medium. The relative expression of 10 key genes (aflF, aflD,
aflE, aflM, aflO, aflP, aflQ, aflX, aflR and aflS) in the biosynthetic pathway was examined
in relation to different environmental factors and phenotypic aflatoxin B1 (AFB1) production.
These data, plus data on relative growth rates and AFB1 production under different aw
temperature conditions were used to develop a mixed-growth-associated product formation
model. The gene expression data were normalized and then used as a linear combination of
the data for all 10 genes and combined with the physical model. This was used to relate
gene expression to aw and temperature conditions to predict AFB1 production. The relationship
between the observed AFB1 production provided a good linear regression fit to the
predicted production based in the model. The model was then validated by examining datasets
outside the model fitting conditions used (378C, 408C and different aw levels). The
relationship between structural genes (aflD, aflM) in the biosynthetic pathway and the regulatory
genes (aflS, aflJ) was examined in relation to aw and temperature by developing
ternary diagrams of relative expression. These findings are important in developing a more
integrated systems approach by combining gene expression, ecophysiological influences and
growth data to predict mycotoxin production. This could help in developing a more targeted
approach to develop prevention strategies to control such carcinogenic natural metabolites
that are prevalent in many staple food products. The model could also be used to predict
the impact of climate change on toxin production.
Thirty-six isolates comprising 23 species of fungi belonging to 8 genera isolated from five regions in Mediterranean Sea (Alexandria) were screened for production of indole alkaloids. Twenty-two isolates gave positive reactions (blue... more
Thirty-six isolates comprising 23 species of fungi belonging to 8 genera isolated from five regions in Mediterranean Sea (Alexandria) were screened for production of indole alkaloids. Twenty-two isolates gave positive reactions (blue spots on TLC) with Van Urk's reagent and were regarded as indole alkaloids producers. Penicillium aurantiogriseum AUMC 9757 was isolated from sea sediment, was selected as the most active producer of indole alkaloids for biological evaluation (antimicrobial and antitumor activities). The crude extract of the strain exhibited high activities against four bacterial strains (Staphylococcus aureus, Bacillus cereus, B. subtillus and Salmonella sp.), four fungal strains (Fusarium solani, Alternaria alternata, Aspergillus flavus and A. ochraceus) and liver carcinoma cell line (HEPG2). The maximum concentration (100 μg/ml) killed 82.76% of the viable cells, while 50 μg/ml killed 80.52% of the viable cells. The cytotoxicity bioassay using brine shrimp eggs revealed that, there was no mortality in the tested samples at different concentrations. The present study identified P. aurantiogriseum from marine sediment as a potential producer of safe bioactive compounds which can be used as antimicrobial and anticancer compounds.
The influence of varying combinations of water activity (aw) and temperature on growth, aflatoxin biosynthesis and aflR/aflS expression of Aspergillus parasiticus was analysed in the ranges 17–42°C and 0.90–0.99 aw. Optimum growth was at... more
The influence of varying combinations of water
activity (aw) and temperature on growth, aflatoxin biosynthesis
and aflR/aflS expression of Aspergillus parasiticus
was analysed in the ranges 17–42°C and 0.90–0.99 aw.
Optimum growth was at 35°C. At each temperature studied,
growth increased from 0.90 to 0.99 aw. Temperatures of 17
and 42°C only supported marginal growth. The external
conditions had a differential effect on aflatoxin B1 or G1
biosynthesis. The temperature optima of aflatoxin B1 and
G1 were not at the temperature which supported optimal
growth (35°C) but either below (aflatoxin G1, 20–30°C) or
above (aflatoxin B1, 37°C). Interestingly, the expression of
the two regulatory genes aflR and aflS showed an
expression profile which corresponded to the biosynthesis
profile of either B1 (aflR) or G1 (aflS). The ratios of the
expression data between aflS:aflR were calculated. High
ratios at a range between 17 and 30°C corresponded with
the production profile of aflatoxin G1 biosynthesis. A low
ratio was observed at >30°C, which was related to aflatoxin
B1 biosynthesis. The results revealed that the temperature
was the key parameter for aflatoxin B1, whereas it was
water activity for G1 biosynthesis. These differences in
regulation may be attributed to variable conditions of the
ecological niche in which these species occur.
activity (aw) and temperature on growth, aflatoxin biosynthesis
and aflR/aflS expression of Aspergillus parasiticus
was analysed in the ranges 17–42°C and 0.90–0.99 aw.
Optimum growth was at 35°C. At each temperature studied,
growth increased from 0.90 to 0.99 aw. Temperatures of 17
and 42°C only supported marginal growth. The external
conditions had a differential effect on aflatoxin B1 or G1
biosynthesis. The temperature optima of aflatoxin B1 and
G1 were not at the temperature which supported optimal
growth (35°C) but either below (aflatoxin G1, 20–30°C) or
above (aflatoxin B1, 37°C). Interestingly, the expression of
the two regulatory genes aflR and aflS showed an
expression profile which corresponded to the biosynthesis
profile of either B1 (aflR) or G1 (aflS). The ratios of the
expression data between aflS:aflR were calculated. High
ratios at a range between 17 and 30°C corresponded with
the production profile of aflatoxin G1 biosynthesis. A low
ratio was observed at >30°C, which was related to aflatoxin
B1 biosynthesis. The results revealed that the temperature
was the key parameter for aflatoxin B1, whereas it was
water activity for G1 biosynthesis. These differences in
regulation may be attributed to variable conditions of the
ecological niche in which these species occur.
Aims: A relative quantification system (RQ-PCR) was used to monitor the correlations between the activity of the nor-1 (=aflD) gene of Aspergillus flavus using real-time PCR in relation to phenotypic aflatoxin B1 (AFB1) production and... more
Aims: A relative quantification system (RQ-PCR) was used to monitor the
correlations between the activity of the nor-1 (=aflD) gene of Aspergillus flavus
using real-time PCR in relation to phenotypic aflatoxin B1 (AFB1) production
and populations of A. flavus in stored peanuts at three water activity levels (aw,
0Æ95, 0Æ90 and 0Æ85) for 6 weeks.
Methods and Results: Real-time PCR was used to amplify the nor-1 gene
(target gene), and benA56 (b-tubulin gene) used as a control gene. Expression
of three structural genes, nor-1 (=aflD), ver-1 (=aflM), and omtA (=aflP), and
the regulatory gene aflR of the aflatoxin biosynthetic pathway were also
assayed. There were significant differences between nor-1 gene expression at the
three aw levels; higher expression at 0Æ90 aw in weeks 1–3, when compared to
0Æ95. In contrast, in the driest treatment (0Æ85 aw) none or very low nor-1
expression occurred. The populations of A. flavus colony-forming units
(CFUs g)1) increased over time with the highest at 0Æ95 aw. Highest AFB1
production was at 0Æ90 and 0Æ95 aw from weeks 3–6. Aw had a significant effect
on aflR transcription at 0Æ95 aw over the 6-week period, while at 0Æ90 aw, only
in the last 2 weeks.
Conclusions: Correlations between different factors showed that log AFB1 · log
CFUs, log AFB1 · aw, and log CFUs · aw were statistically significant, while log
CFUs · RQ-PCR and RQ-PCR · aw were not. The AflR gene may not have an
important role in the regulation of nor-1 expression in food matrices (e.g.
peanuts).
Significance and Impact of the study: Determination of correlations between
nor-1 expression and aflatoxin production by A. flavus in raw peanuts under
different aw levels could be helpful to predict potential risk of aflatoxin production
during storage of this hygroscopic food product and minimize contamination
with the AFB1.
correlations between the activity of the nor-1 (=aflD) gene of Aspergillus flavus
using real-time PCR in relation to phenotypic aflatoxin B1 (AFB1) production
and populations of A. flavus in stored peanuts at three water activity levels (aw,
0Æ95, 0Æ90 and 0Æ85) for 6 weeks.
Methods and Results: Real-time PCR was used to amplify the nor-1 gene
(target gene), and benA56 (b-tubulin gene) used as a control gene. Expression
of three structural genes, nor-1 (=aflD), ver-1 (=aflM), and omtA (=aflP), and
the regulatory gene aflR of the aflatoxin biosynthetic pathway were also
assayed. There were significant differences between nor-1 gene expression at the
three aw levels; higher expression at 0Æ90 aw in weeks 1–3, when compared to
0Æ95. In contrast, in the driest treatment (0Æ85 aw) none or very low nor-1
expression occurred. The populations of A. flavus colony-forming units
(CFUs g)1) increased over time with the highest at 0Æ95 aw. Highest AFB1
production was at 0Æ90 and 0Æ95 aw from weeks 3–6. Aw had a significant effect
on aflR transcription at 0Æ95 aw over the 6-week period, while at 0Æ90 aw, only
in the last 2 weeks.
Conclusions: Correlations between different factors showed that log AFB1 · log
CFUs, log AFB1 · aw, and log CFUs · aw were statistically significant, while log
CFUs · RQ-PCR and RQ-PCR · aw were not. The AflR gene may not have an
important role in the regulation of nor-1 expression in food matrices (e.g.
peanuts).
Significance and Impact of the study: Determination of correlations between
nor-1 expression and aflatoxin production by A. flavus in raw peanuts under
different aw levels could be helpful to predict potential risk of aflatoxin production
during storage of this hygroscopic food product and minimize contamination
with the AFB1.
- by Ahmed M Abdel-hadi and +1
- •
- Aflatoxin Genes
Aspergillus flavus and Aspergillus parasiticus are important pathogens of cotton, corn, peanuts and other oil-seed crops, producing toxins both in the field and during storage. We have designed three siRNA sequences (Nor-Ia, Nor-Ib,... more
Aspergillus flavus and Aspergillus parasiticus are important pathogens of cotton, corn, peanuts and other oil-seed crops, producing toxins both in the field and during storage. We have designed three siRNA sequences (Nor-Ia, Nor-Ib, Nor-Ic) to target the mRNA sequence of the aflD gene to examine the potential for using RNA silencing technology to control aflatoxin production. Thus, the effect of siRNAs targeting of two key genes in the aflatoxin biosynthetic pathway, aflD (structural) and aflR (regulatory gene) and on aflatoxin B1 (AFB1), and aflatoxin G1 (AFG1) production was examined. The study showed that Nor-Ib gave a significant decrease in aflD mRNA, aflR mRNA abundance, and AFB1 production (98, 97 and 97% when compared to the controls) in A. flavus NRRL3357, respectively. Reduction in aflD and aflR mRNA abundance and AFB1 production increased with concentration of siRNA tested. There was a significant inhibition in aflD and AFB1 production by A. flavus EGP9 and AFG1 production by A. parasiticus NRRL 13005. However, there was no significant decrease in AFG1 production by A. parasiticus SSWT 2999. Changes in AFB1 production in relation to mRNA levels of aflD showed a good correlation (R = 0.88; P = 0.00001); changes in aflR mRNA level in relation to mRNA level of aflD also showed good correlation (R = 0.82; P = 0.0001). The correlations between changes in aflR and aflD gene expression suggests a strong relationship between thesestructural and regulatory genes, and that aflD could be used as a target gene to develop efficient means for aflatoxin control using RNA silencing technology.
- by Ahmed M Abdel-hadi and +1
- •
- RNA silencing
A microarray analysis was performed to study the effect of varying combinations of water activity and temperature on the activation of aflatoxin biosynthesis genes in Aspergillus flavus grown on YES medium. Generally A. flavus showed... more
A microarray analysis was performed to study the effect of varying combinations of water activity and
temperature on the activation of aflatoxin biosynthesis genes in Aspergillus flavus grown on YES medium.
Generally A. flavus showed expression of the aflatoxin biosynthetic genes at all parameter combinations
tested. Certain combinations of aw and temperature, especially combinations which imposed stress on the
fungus resulted in a significant reduction of the growth rate. At these conditions induction of the whole
aflatoxin biosynthesis gene cluster occurred, however the produced aflatoxin B1 was low. At all other
combinations (25 °C/0.95 and 0.99; 30 °C/0.95 and 0.99; 35 °C/0.95 and 0.99) a reduced basal level of cluster
gene expression occurred. At these combinations a high growth rate was obtained as well as high aflatoxin
production. When single genes were compared, two groups with different expression profiles in relation to
water activity/temperature combinations occurred. These two groups were co-ordinately localized within
the aflatoxin gene cluster. The ratio of aflR/aflJ expression was correlated with increased aflatoxin
biosynthesis
temperature on the activation of aflatoxin biosynthesis genes in Aspergillus flavus grown on YES medium.
Generally A. flavus showed expression of the aflatoxin biosynthetic genes at all parameter combinations
tested. Certain combinations of aw and temperature, especially combinations which imposed stress on the
fungus resulted in a significant reduction of the growth rate. At these conditions induction of the whole
aflatoxin biosynthesis gene cluster occurred, however the produced aflatoxin B1 was low. At all other
combinations (25 °C/0.95 and 0.99; 30 °C/0.95 and 0.99; 35 °C/0.95 and 0.99) a reduced basal level of cluster
gene expression occurred. At these combinations a high growth rate was obtained as well as high aflatoxin
production. When single genes were compared, two groups with different expression profiles in relation to
water activity/temperature combinations occurred. These two groups were co-ordinately localized within
the aflatoxin gene cluster. The ratio of aflR/aflJ expression was correlated with increased aflatoxin
biosynthesis
A wide range of Aspergillus section Flavi strains were isolated from Egyptian peanut samples. 18 of these strains were compared with 2 type strains (A. flavus SRRC G1907, A. parasiticus 2747) for aflatoxin production based on (a)... more
A wide range of Aspergillus section Flavi strains were isolated from Egyptian peanut samples. 18 of these strains were compared with 2 type strains (A. flavus SRRC G1907, A. parasiticus 2747) for aflatoxin production based on (a) qualitative fluorescence using a coconut cream agar medium (CAM), and (b) aflatoxin production on a conducive Yeast Extract-Sucrose (YES) medium using HPLC. These results were validated by using molecular approaches (the structural genes, aflD (nor-1), aflM (ver-1) and aflP (omt A) and the regulatory gene aflR) to discriminate between aflatoxigenic and non-aflatoxigenic strains of the Aspergillus section Flavi group in vitro and on peanut seeds. Overall, 13/18 strains producing aflatoxin B 1 (AFB 1) and aflatoxin B 2 (AFB 2) in the range 1.27-213.35 μg/g medium were identified. In addition, 5 non-aflatoxin producing strains were found. The expression of these four genes was assessed using PCR (polymerase chain reaction) and RT-PCR (Reverse transcription polymerase chain reaction). PCR showed that all strains contained the four aflatoxin genes examined, regardless of expression profiles. Our results also showed that aflD expression is a reliable marker to discriminate between aflatoxin and non-aflatoxin producers. Interestingly, when an aflatoxin producing strain and three non-aflatoxigenic strains were subsequently grown on peanuts at 0.95 water activity, two of the non-producers were able to initiate aflatoxin biosynthesis. This suggests that growth of strains on the natural food matrix is important for confirming aflatoxigenic production potential.
- by Ahmed M Abdel-hadi and +1
- •
- Aflatoxin B1, Aflatoxin Genes
- by Ahmed M Abdel-hadi and +1
- •
- Molecular Biochemistry
Recently, methods to analyze aflatoxin M 1 (AFM 1) in milk and dairy products have been developed for both screening purposes (i.e., rapid, economical, and simple methods) and for confirmation by accurate, reproducible, and sensitive... more
Recently, methods to analyze aflatoxin M 1 (AFM 1) in milk and dairy products have been developed for both screening purposes (i.e., rapid, economical, and simple methods) and for confirmation by accurate, reproducible, and sensitive quantification. The aim of this study was to evaluate the efficiency of different rapid kits and techniques available on the market by using different analytical methods: thin layer chromatography (TLC), immunoaffinity column, AFM 1 im-munochromatographic strip, and ELISA; some samples were also submitted to HPLC for comparison of results. One hundred thirty-eight samples were collected from rural subsistence and commercial dairy farms in selected areas of Egypt and South Africa and analyzed for the presence of AFM 1. The results obtained by AFM 1 immunochromatographic strip indicated the lowest frequency of occurrence, with a detection incidence of 20.45% in Egyptian samples and 16% in South African samples. Aflatoxin M 1 was detected by ELISA in 65 (73.9%) Egyptian milk samples, with a range of 8.52 to 78.06 ng/L, and in 34 (68%) South African milk samples, with a range of 5 to 120 ng/L. A higher incidence of AFM 1 in Egyptian milk samples was shown by TLC (81.8%) compared with ELISA (73.9%). Samples analyzed by ELISA in South African milk samples demonstrated satisfactory correlation when compared with HPLC coupled with Coring cell (an electrochemi-cal cell for the derivatization of AFM 1). Among the positive samples, 18 of the Egyptian samples (20.45%) positive by ELISA had levels of AFM 1 above the Euro-pean Union (EU) regulatory limit (50 ng/L), whereas 65 samples (73.9%) were above the Egyptian regulatory limit (0 ng/L). Six of the South African samples (12%) tested by ELISA were above the South African (50 ng/L) and EU regulatory limits. The mean concentration of AFM 1 was 25.79 ng/L in Egyptian samples and 17.06 ng/L by ELISA and 39 ng/L by HPLC in South African samples. These contamination levels would not represent a serious public health hazard according to EU legislation.
- by Ahmed M Abdel-hadi and +3
- •
- Mycotoxins Research
Chemical investigation of the marine derived fungus Penicillium aurantiogriseum AUMC 9759 isolated from sea sediment of Mediterranean Sea (Alexandria) has led to isolation of two bioactive alkaloids, Viridicatin (1) and... more
Chemical investigation of the marine derived fungus Penicillium aurantiogriseum AUMC 9759 isolated from sea sediment of Mediterranean Sea (Alexandria) has led to isolation of two bioactive alkaloids, Viridicatin (1) and Dehydrocyclopeptine (2) along with sub faction B (mixture of two sterols). The compounds were isolated and purified by combined chromatographic procedures.The structures were established by 1 H and 13 C NMR experiments and HRESIMS data. This is the first report for dehydrocyclopeptine 1 H and 13 C NMR assignments. LC-MS of total fungal extract revealed the presence of cyclopeptine, dehydrocyclopeptine, viridicatin, terrestric acid, viridicatic acid, roquefortine c and 4-hydroy-3,6-Dimethyl-2H-pyran-2-one. The crude extract of the strain exhibited high activities against four bacterial and four fungal strains. Viridicatin (1) showed strong activity against Mycobacterium tuberculosis. Sub faction B showed significant cytotoxicity against two cell line; hepatic cellular carcinoma (HEPG2) and breast cancer (mcf7) with IC50% of 32.8774 µg/ml and 24.3284 µg/ml respectively.
This study examined the effect of water activity (0.85-0.995 a w) on growth rate and asexual spore production for four mycotoxigenic strains (Aspergillus flavus, Aspergillus ochraceus, Aspergillus carbonarius and Penicillium verrucosum)... more
This study examined the effect of water activity (0.85-0.995 a w) on growth rate and asexual spore production for four mycotoxigenic strains (Aspergillus flavus, Aspergillus ochraceus, Aspergillus carbonarius and Penicillium verrucosum) on Malt Extract Agar (MEA). The water activity levels of MEA media were modified ionically (NaCl) and non-ionically (glycerol). Results showed that the optimum a w for growth was at 0.98-0.995 for all species using both solutes. However, when water stress was inflicted, there was a slower growth for all species. The limit for growth of the strains was at 0.85-0.9 a w , there was no growth at 0.9 a w for A. carbonarius using NaCl solute and 0.85 a w for A. carbonarius and A. flavus using glycerol solute. A. ochraceus and P. verrucosum had a higher tolerance to lower water activity than A. carbonarius and A. flavus when modified with NaCl. There were significant differences in sporulation between species on glycerol and NaCl-amended media. The optimum conditions for production of asexual spores is often very different from that for growth. Little amount of conidial spore occurred at 0.93-0.95 a w modified with NaCl in cultures of A. carbonarius and P. verrucosum but high amounts were produced by A. ochraceus and A. flavus. Optimum water activity for spore production was 0.995 a w for A. carbonarius, 0.98 a w for P. verrucosum, 0.95 a w for A. flavus and 0.85 a w for A. ochraceus on modified media with glycerol. This is the first detailed study to examine the similarities and differences in growth and sporulation in response to the change of water activity level of important mycotoxigenic species. This study can help in understanding why these species are varied in mycotoxin production, so the results obtained in this study may be useful for application in systems of food safety management.