Every IDE I know shows you a log of the raw commands its running. I use the IDE first, then if something goes wrong (which very very rarely happens, git isn't exactly complicated) I check the log and see what it's trying to do.
On top of that, the IDE will let you run git directly in an authenticated session if you really desire. If a simple/dumb GUI wrapper around git is enough to scare off an experienced developer, then I have my doubts about their competence.
