research communications
ISSN 2056-9890
Bis[N-2-hydroxyethyl,N-methyldithiocarbamatoj2S,S)’-4-{[(pyridin-4-ylmethylidene)hydrazinylidene}methyl]pyridine-jN1)zinc(II): crystal
structure and Hirshfeld surface analysis
Grant A. Broker,a Mukesh M. Jotanib‡ and Edward R. T. Tiekinkc*
Received 31 August 2017
Accepted 5 September 2017
Edited by W. T. A. Harrison, University of
Aberdeen, Scotland
‡ Additional correspondence author, e-mail:
mmjotani@rediffmail.com.
Keywords: crystal structure; zinc; dithiocarbamate; 4-pyridinealdazine; hydrogen
bonding.
CCDC reference: 1572824
Supporting information: this article has
supporting information at journals.iucr.org/e
a
2020 Eldridge Parkway, Apt 1802, Houston, Texas 77077, USA, bDepartment of Physics, Bhavan’s Sheth R. A. College
of Science, Ahmedabad, Gujarat 380001, India, and cResearch Centre for Crystalline Materials, School of Science and
Technology, Sunway University, 47500 Bandar Sunway, Selangor Darul Ehsan, Malaysia. *Correspondence e-mail:
edwardt@sunway.edu.my
In the title compound, [Zn(C4H8NOS2)2(C12H10N4)], the ZnII atom exists within
a NS4 donor set defined by two chelating dithiocarbamate ligands and a pyridylN atom derived from a terminally bound 4-pyridinealdazine ligand. The
distorted coordination geometry tends towards square-pyramidal with the
pyridyl-N atom occupying the apical position. In the crystal, hydroxyl-O—
H O(hydroxyl) and hydroxyl-O—H N(pyridyl) hydrogen-bonding give rise
to a supramolecular double-chain along [110]; methyl-C—H (chelate ring)
interactions help to consolidate the chain. The chains are connected into a threedimensional architecture via pyridyl-C—H O(hydroxyl) interactions. In
addition to the contacts mentioned above, the Hirshfeld surface analysis points
to the significance of relatively weak – interactions between pyridyl rings
[inter-centroid distance = 3.901 (3) Å].
1. Chemical context
In the realm of coordination polymers/metal–organic framework structures, bridging bipyridyl ligands have proven most
effective in connecting metal centres. This is equally true in
the construction of coordination polymers of cadmium(II)
dithiocarbamates, Cd(S2CNR2)2, R = alkyl. Thus, one-dimensional polymers have been found in the crystals of
[Cd(S2CNR2)2(NN)]n in cases where R = Et and NN = 1,2bis(4-pyridyl)ethylene (Chai et al., 2003), R = Et and NN = 1,2bis(4-pyridyl)ethane (Avila et al., 2006) and R = Benz, NN =
4,40 -bipyridyl (Fan et al., 2007). In an extension of these
studies, hydrogen-bonding functionality, in the form of
hydroxyethyl groups was included in at least one of the R
groups of Cd(S2CNR2)2. It was of some surprise that coordination polymers based on Cd N dative bonds were not
formed as the putative bridging NN ligand was terminally
bound. The first example of this phenomenon was noted in a
compound closely related to the title compound, i.e.
Cd[S2CN(n-Pr)CH2CH2OH)]2(4-pyridinealdazine)2 (Broker
& Tiekink, 2011), for which both potentially bidentate ligands
are monodentate. The non-coordinating pyridyl-N atoms
participate in hydroxyl-O—H N(pyridyl) hydrogen-bonds.
In another interesting example, regardless of the stoichiometry of the reaction between Cd[S2CN(i-Pr)CH2CH2OH]2
and 1,2-bis(4-pyridyl)ethylene, i.e. 1:2, 1:1 and 2:1, only the
binuclear compound {Cd[S2CN(i-Pr)CH2CH2OH)]2}2[1,2bis(4-pyridyl)ethylene]3, featuring one bridging and two
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terminally bound 1,2-bis(4-pyridyl)ethylene ligands, could be
isolated (Jotani et al., 2016). Finally, in an unprecedented
result, the original binuclear {Cd[S2CN(i-Pr)CH2CH2OH]2}2
aggregate was retained in the structure of [{Cd[S2CN(iPr)CH2CH2OH]2}2(3-pyridinealdazine)]2 with two terminally
bound 3-pyridinealdazine ligands (Arman et al., 2016). This is
unusual as there are no precedents of adduct formation by the
zinc-triad dithiocarbamates that resulted in the retention of
the original binuclear core (Tiekink, 2003).
Table 1
Selected geometric parameters (Å, ).
Zn—S1
Zn—S2
Zn—S3
S1—Zn—S3
2.4152 (12)
2.5152 (11)
2.3890 (12)
Zn—S4
Zn—N3
136.48 (4)
S2—Zn—S4
2.5162 (11)
2.068 (3)
155.56 (4)
(Lai & Tiekink, 2003). This difference in behaviour, i.e.
polymer formation for cadmium but not for zinc dithiocarbamates, is explained in terms of the larger size of cadmium
versus zinc, which enables cadmium to increase its coordination number. In continuation of our studies in this area, the
title compound, Zn[S2CN(Me)CH2CH2OH)]2(4-pyridinealdazine), (I), was isolated and shown to feature a terminally
bound 4-pyridinealdazine ligand. Herein, its crystal and molecular structures are described as is an analysis of the calculated Hirshfeld surface.
2. Structural commentary
The molecular structure of (I) is shown in Fig. 1 and selected
geometric parameters are given in Table 1. The zinc(II) atom
is coordinated by two chelating dithiocarbamate ligands and a
nitrogen atom derived from a monodentate 4-pyridinealdazine ligand. There are relatively small differences in the
By contrast to the chemistry described above for cadmium
dithiocarbamates, no polymeric structures have been observed
for zinc analogues with potentially bridging bipyridyl molecules. Instead, only binuclear compounds of the general
formula [Zn(S2CNRR0 )2]2(NN), i.e. R = CH2CH2OH and R0 =
Me, Et or CH2CH2OH for NN = 4,40 -bipyridyl (Benson et al.,
2007), R = R0 = CH2CH2OH and NN = pyrazine (Jotani et al.,
2017), and R = CH2CH2OH and R0 = Me for NN = (3-pyridyl)CH2N(H)C( Y)C( Y)N(H)CH2(3-pyridyl) where Y = O
(Poplaukhin & Tiekink, 2010) and Y = S (Poplaukhin et al.,
2012). There are also several all-alkyl species adopting the
binuclear motif with a notable example being the product of
the reaction of [Zn(S2CNR2)2]2 with an excess of 1,2-bis(4pyridyl)ethylene in which the binuclear species co-crystallized
with an uncoordinated molecule of 1,2-bis(4-pyridyl)ethylene
Acta Cryst. (2017). E73, 1458–1464
Figure 1
The molecular structure of (I), showing the atom-labelling scheme and
displacement ellipsoids at the 50% probability level.
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Table 2
Hydrogen-bond geometry (Å, ).
Cg1 is the centroid of the Zn/S1/S2/C1 ring.
D—H A
i
O1—H1O O2
O2—H2O N6ii
C20—H20 O1iii
C6—H6B Cg1i
Symmetry codes:
x; y 32; z þ 12.
(i)
D—H
H A
D A
D—H A
0.85 (5)
0.84 (4)
0.95
0.99
1.92 (5)
1.95 (4)
2.32
2.59
2.721 (5)
2.769 (5)
3.233 (6)
3.540 (4)
158 (5)
163 (5)
162
162
x; y þ 1; z þ 1;
(ii)
x þ 1; y 1; z þ 1;
four sulfur atoms [r.m.s. deviation = 0.1790 Å] in the direction
of the pyridyl-N atom. The dihedral angle between the best
plane through the four sulfur atoms and the coordinating
pyridyl residue is 84.82 (9) , consistent with a nearly
symmetric perpendicular relationship. The 4-pyridinealdazine
molecule has an all-trans conformation and is essentially
planar as seen in the dihedral angle of 2.7 (3) formed between
the rings.
(iii)
3. Supramolecular features
Zn—S bond lengths formed by each dithiocarbamate ligand,
i.e. Zn—S = (Zn—Slong Zn—Sshort) = 0.10 Å for the S1dithiocarbamate ligand which increases to ca 0.12 Å for the
second ligand. This symmetric mode of coordination is
reflected in the equivalence of the associated C—S bond
lengths. The resulting NS4 donor set is highly distorted as
shown by the value of of 0.32 which is intermediate between
ideal square-pyramidal ( = 0.0) and trigonal-bipyramidal ( =
1.0) geometries (Addison et al., 1984) but, with a tendency
towards the former. In the square-pyramidal description, the
zinc(II) centre lies 0.7107 (7) Å out of the plane defined by the
Both conventional and non-conventional hydrogen-bonding
interactions feature in the crystal of (I), Table 2. HydroxylO—H O(hydroxyl) hydrogen-bonds between centrosymmetrically related molecules lead to 28-membered
{ HOC2NCSZnSCNC2O}2 synthons. On either side of this
aggregate are hydroxyl-O—H N(pyridyl) hydrogen bonds
leading
to
centrosymmetric
40-membered
{ HOC2NCSZnNC4N2C4N}2 synthons. The result is a
supramolecular double-chain with the appearance of a ladder
that extends along [110], Fig. 2a. Within the chains there are
notable methylene-C—H (chelate ring) interactions,
Figure 2
Molecular packing for (I): (a) the supramolecular double chain sustained by O—H O and O—H N hydrogen-bonding, shown as orange and blue,
dashed lines, respectively, (b) a view of the immediate environment of one chain down the direction of propagation highlighting the role of C—H O
interactions (purple dashed lines) in sustaining the three-dimensional architecture and (c) a view of the unit-cell contents in projection down the b axis.
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Table 3
Table 4
Summary of short inter-atomic contacts (Å) in (I).
Percentage contributions of inter-atomic contacts to the Hirshfeld
surfaces for (I).
Contact
Distance
Symmetry operation
H1O H2O
H4B H13
Zn C6
Zn H6B
C1 H6B
S1 H6B
S1 H15
S2 H7B
S4 C14
C2 H4A
C5 H18
C18 H2O
C19 H2O
N5 H8A
2.21 (7)
2.30
3.835 (4)
3.00
2.88
2.92
2.98
2.89
3.217 (4)
2.88
2.77
2.89 (5)
2.85 (4)
2.73
x, 1 y, 1 z
x, 12 + y, 12 z
x, 1 y, 1 z
x, 1 y, 1 z
x, 1 y, 1 z
x, 1 y, 1 z
x, 1 + y, z
x, y, 1 z
x, 1 + y, z
x, 12 + y, 12 z
1 x, 1 y, 1 z
1 x, 1 y, 1 z
1 x, 1 y, 1 z
1 x, y, 1 z
Table 2, which are garnering greater attention in the chemical
crystallographic community (Tiekink, 2017). While the
hydroxyl-O2 atom participates in acceptor O—H O and
donor O—H N hydrogen-bonds, the O1 atom only forms a
O—H O hydrogen-bond. This being stated, this atom
accepts a close pyridyl-C—H interaction so that each chain is
associated with four other chains. As seen from Fig. 2b, the
surrounding chains are inclined by approximately 90 and
have orientations orthogonal to the reference chain. In this
manner, a three-dimensional architecture is constructed as
illustrated in Fig. 2c.
4. Hirshfeld surface analysis
Additional insight into the intermolecular interactions influential in the crystal of (I) was obtained from an analysis of the
Hirshfeld surfaces which were calculated in accord with a
recent publication on related zinc dithiocarbamate
compounds (Jotani et al., 2017). On the Hirshfeld surface
mapped over dnorm, Fig. 3, the donors and acceptors of the O—
H O and O—H N hydrogen-bonds are viewed as brightred spots near hydroxyl-H1O, H2O, hydroxyl-O2 and pyridylN6 atoms, located largely at the extremes of the molecule. The
Contact
Percentage contribution
H H
S H/H S
C H/H C
N H/H N
O H/H O
C C
S N/N S
S S
C S/S C
C N/N C
Zn H/H Zn
Zn S/S Zn
44.6
15.4
13.1
10.2
6.7
2.8
2.8
1.5
1.2
1.0
0.6
0.1
presence of bright-red spots near the H1O and H2O atoms in
Fig. 3 are also indicative of short inter-atomic H H and
C H/H C contacts, see Table 3. The diminutive-red spots
near the methyl-C14, sulfur-S4, pyridyl-H20 and hydroxyl-O1
atoms characterize the influence of short inter-atomic C S/
S C contacts, Table 3, and intermolecular pyridine-C20—
H20 O1 interactions. The donors and acceptors of the above
intermolecular interactions are also represented with blue and
red regions on the Hirshfeld surface mapped over electrostatic
potential shown in Fig. 4. The immediate environments about
a reference molecule within dnorm-mapped Hirshfeld surface
highlighting intermolecular O—H O, O—H N and C—
H O, short inter-atomic C S/S C contacts, — stacking
interactions and C—H (chelate) interactions are illustrated in Fig. 5a–c, respectively.
The overall two dimensional fingerprint plot, Fig. 6a, and
those delineated into H H, C H/H C, N H/H N,
S H/H S, O H/H O, C C, C S/S C and Zn H/
H Zn contacts (McKinnon et al., 2007) are illustrated in
Fig. 6b–i, respectively; the relative contributions from
different inter-atomic contacts to the Hirshfeld surfaces are
summarized in Table 4. The pair of adjacent short spikes at
Figure 4
Figure 3
Two views of the Hirshfeld surface for (I) mapped over dnorm in the range
0.400 to 1.552 au.
Acta Cryst. (2017). E73, 1458–1464
Two views of the Hirshfeld surface for (I) mapped over the electrostatic
potential in the range 0.151 au. The red and blue regions represent
negative and positive electrostatic potentials, respectively.
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Figure 5
Views of Hirshfeld surface mapped over dnorm about a reference molecule showing (a) intermolecular O—H O, O—H N and C—H O interactions
as black dashed lines, (b) short inter-atomic S C/C S contacts and — stacking interactions as black and red lines, respectively (H atoms are
omitted) and (c) C—H (chelate) interactions through short inter-atomic contacts involving the methylene-H6B atom with the Zn, S1 and C1 atoms of
the chelate ring as black dashed lines.
Figure 6
The full two-dimensional fingerprint plot for (I) and fingerprint plots delineated into (b) H H, (c) C H/H C, (d) N H/H N, (e) S H/H S, (f)
O H/H O, (g) C C, (h) C S/S C and (i) Zn H/H Zn contacts.
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5. Database survey
Figure 7
Two views of Hirshfeld surface mapped over curvedness showing flat
regions over pyridyl-(N3,C9–C13) and (N6, C15–C20) rings with labels 1
and 2, respectively.
de + di 2.2 Å flanked by the broad spikes with tips at de + di
2.3 Å in the fingerprint plot delineated into H H contacts
are due to short inter-atomic H H contacts, Fig. 6b. The
forceps-like tips at de + di 2.8 Å in the fingerprint plot
delineated into C H/H C contacts, Fig. 6c, are due to the
presence of some short inter-atomic contacts involving these
atoms, Table 3. The effect of the intermolecular C—
H (chelate) interactions is also reflected by the short interatomic contacts formed by the methylene-C6 with the Zn
atom, and methylene-H6B with the Zn, S1 and C1 atoms of
the chelate ring, Fig. 6c, 6e, 6i, and Table 2. The two pairs of
adjacent long spikes on the fingerprint plots delineated into
N H/H N and O H/H O contacts, Fig. 6d and 6f, with
the pair of tips at de + di 2.0 Å and de + di 1.9 Å,
respectively, indicate the presence of conventional O—H O
and O—H N hydrogen-bonds in the structure. The points
corresponding to short inter-atomic N H/H N contacts,
Table 3, are merged within the plot in Fig. 6d. The pattern of
aligned green points superimposed on the forceps-like distribution of blue points in the S H/H S delineated fingerprint plot in Fig. 6e characterize the presence of short interatomic S H/H S contacts, Table 3, and C—H (chelate)
interactions, Fig. 5c. The C—H O interactions appear as the
distribution of points in the short parabolic form attached to
each of the spikes on the outer side of fingerprint plot delineated into O H/H O contacts, Fig. 6f, with (de + di)min
2.3 Å. The parabolic distribution of points in the (de = di)
1.8–2.0 Å range in the fingerprint plot delineated into C C
contacts, Fig. 6g, indicate the existence of weak – stacking
interactions between the pyridyl-(N3,C9–C13) and (N6, C15–
C20)i rings [Cg Cgi = 3.901 (3) Å; symmetry code: (i) = x,
1 + y, z]. This observation is also viewed as the flat region
around these rings in the Hirshfeld surfaces mapped over
curvedness in Fig. 7. Both the C S/S C and Zn H/
H Zn contacts make small but discernible contributions of
1.2 and 0.6% to the Hirshfeld surface, respectively, which are
manifested as the pair of the short spikes in the centre of
Fig. 6h, with their tips at de + di 3.2 Å, and wings in Fig. 6i.
The low contribution from other contacts summarized in
Table 4 have no significant influence on the molecular packing
owing to their long separations.
Acta Cryst. (2017). E73, 1458–1464
A search of the Cambridge Structural Database (Version 5.38,
May 2017 update; Groom et al., 2016) showed there were over
145 examples of metal complexes/main-group element
compounds containing the 4-pyridinealdazine molecule.
Bridging modes were observed in both cadmium(II) (Lai &
Tiekink, 2006) and nickel(II) (e.g. Berdugo & Tiekink, 2009)
dithiophosphate [S2P(OR)2] derivatives, indicating bridging
modes are possible in the presence of 1,1-dithiolate co-ligands.
There were six examples of structures where 4-pyridinealdazine was present in the crystal but was non-coordinating,
and two where the ligand was terminally bound as in (I), i.e.
the cadmium analogue of (I) and in a structure particularly
worth highlighting as both a terminally bound ligand as well as
a non-coordinating molecule of 4-pyridinealdazine are
present,
namely
[Zn(OH2)2[O(H)Me]2(4-pyridinealdazine)2](ClO4)24-pyridinealdazine, 1.72MeOH, 1.28H2O
(Shoshnik et al., 2005). In summary, the 4-pyridinealdazine
molecule is usually found to be bridging, a conclusion vindicated by this mode of coordination being observed in about
95% of structures having 4-pyridinealdazine. While one might
be tempted to ascribe the unusual behaviour of 4-pyridinealdazine in (I) and the cadmium(II) analogue to the influence
of hydrogen-bonding associated with the dithiocarbamate
ligand, it is salutatory to recall that the sole example of a
monodentate bipyridyl ligand is found in the structure of
Zn[S2CN(n-Pr)2]2(4,40 -bipyridyl) (Klevtsova et al., 2001),
where there is no possibility of conventional hydrogenbonding interactions; the binuclear species, {Zn[S2CN(nPr)2]2}2(4,40 -bipyridyl), was characterized in the same study.
6. Synthesis and crystallization
Compound (I) was prepared following the standard literature
procedure whereby the 1:1 reaction of Zn[S2CN(Me)CH2CH2OH]2 (Howie et al., 2008) and 4-pyridinealdazine (Sigma
Aldrich). Yellow crystals of (I) were obtained from the slow
evaporation of a chloroform/acetonitrile (3/1) solution.
7. Refinement details
Crystal data, data collection and structure refinement details
are summarized in Table 5. The carbon-bound H atoms were
placed in calculated positions (C—H = 0.95–0.99 Å) and were
included in the refinement in the riding-model approximation,
with Uiso(H) set to 1.2–1.5Ueq(C). The O-bound H atoms were
located in a difference-Fourier map but were refined with
distance restraint of O—H = 0.840.01 Å, and with Uiso(H)
set to 1.5Ueq(O).
Acknowledgements
We thank Sunway University for support of biological and
crystal engineering studies of metal dithiocarbamates.
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Table 5
Experimental details.
Crystal data
Chemical formula
Mr
Crystal system, space group
Temperature (K)
a, b, c (Å)
( )
V (Å3)
Z
Radiation type
(mm1)
Crystal size (mm)
[Zn(C4H8NOS2)2C12H10N4)]
576.08
Monoclinic, P21/c
153
11.499 (4), 8.5710 (19), 25.945 (7)
95.515 (8)
2545.3 (13)
4
Mo K
1.32
0.40 0.18 0.15
Data collection
Diffractometer
Absorption correction
Tmin, Tmax
No. of measured, independent and
observed [I > 2(I)] reflections
Rint
(sin /)max (Å1)
Refinement
R[F 2 > 2(F 2)], wR(F 2), S
No. of reflections
No. of parameters
No. of restraints
H-atom treatment
max, min (e Å3)
Rigaku AFC12K/SATURN724
Multi-scan (ABSCOR; Higashi,
1995)
0.575, 1
25373, 4485, 4180
0.044
0.595
0.050, 0.132, 1.13
4485
306
2
H atoms treated by a mixture of
independent and constrained
refinement
0.72, 0.44
Computer programs: CrystalClear (Molecular Structure Corporation & Rigaku, 2005),
SHELXS (Sheldrick, 2008), SHELXL2014/7 (Sheldrick, 2015), ORTEP-3 for Windows
(Farrugia, 2012) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
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Acta Cryst. (2017). E73, 1458–1464
supporting information
supporting information
Acta Cryst. (2017). E73, 1458-1464
[https://doi.org/10.1107/S2056989017012725]
Bis[N-2-hydroxyethyl,N-methyldithiocarbamato-κ2S,S)′-4-{[(pyridin-4-ylmethylidene)hydrazinylidene}methyl]pyridine-κN1)zinc(II): crystal structure and
Hirshfeld surface analysis
Grant A. Broker, Mukesh M. Jotani and Edward R. T. Tiekink
Computing details
Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); cell refinement: CrystalClear
(Molecular Structure Corporation & Rigaku, 2005); data reduction: CrystalClear (Molecular Structure Corporation &
Rigaku, 2005); program(s) used to solve structure: SHELXS (Sheldrick, 2008); program(s) used to refine structure:
SHELXL2014/7 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and DIAMOND
(Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Bis[N-2-hydroxyethyl,N-methyldithiocarbamato-κ2S,S)′-4-{[(pyridin-4ylmethylidene)hydrazinylidene}methyl]pyridine-κN1)zinc(II)
Crystal data
[Zn(C4H8NOS2)2C12H10N4)]
Mr = 576.08
Monoclinic, P21/c
a = 11.499 (4) Å
b = 8.5710 (19) Å
c = 25.945 (7) Å
β = 95.515 (8)°
V = 2545.3 (13) Å3
Z=4
F(000) = 1192
Dx = 1.503 Mg m−3
Mo Kα radiation, λ = 0.71069 Å
Cell parameters from 1535 reflections
θ = 3.1–30.3°
µ = 1.32 mm−1
T = 153 K
Prism, yellow
0.40 × 0.18 × 0.15 mm
Data collection
Rigaku AFC12K/SATURN724
diffractometer
Radiation source: fine-focus sealed tube
Graphite monochromator
ω scans
Absorption correction: multi-scan
(ABSCOR; Higashi, 1995)
Tmin = 0.575, Tmax = 1
25373 measured reflections
4485 independent reflections
4180 reflections with I > 2σ(I)
Rint = 0.044
θmax = 25.0°, θmin = 2.3°
h = −13→13
k = −10→8
l = −30→30
Refinement
Refinement on F2
Least-squares matrix: full
R[F2 > 2σ(F2)] = 0.050
wR(F2) = 0.132
S = 1.13
Acta Cryst. (2017). E73, 1458-1464
4485 reflections
306 parameters
2 restraints
Hydrogen site location: mixed
sup-1
supporting information
H atoms treated by a mixture of independent
and constrained refinement
w = 1/[σ2(Fo2) + (0.0663P)2 + 3.198P]
where P = (Fo2 + 2Fc2)/3
(Δ/σ)max = 0.001
Δρmax = 0.72 e Å−3
Δρmin = −0.44 e Å−3
Special details
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance
matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles;
correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate
(isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
Zn
S1
S2
S3
S4
O1
H1O
O2
H2O
N1
N2
N3
N4
N5
N6
C1
C2
H2A
H2B
C3
H3A
H3B
C4
H4A
H4B
H4C
C5
C6
H6A
H6B
C7
H7A
H7B
C8
H8A
x
y
z
Uiso*/Ueq
0.13806 (4)
0.13958 (8)
−0.04566 (8)
0.04838 (8)
0.26964 (8)
−0.2678 (3)
−0.225 (4)
0.1675 (3)
0.230 (3)
−0.0546 (3)
0.1419 (3)
0.2411 (3)
0.4206 (3)
0.4931 (3)
0.6562 (3)
0.0057 (3)
−0.1697 (3)
−0.1744
−0.1786
−0.2681 (4)
−0.3435
−0.2612
−0.0090 (4)
0.0029
−0.0650
0.0656
0.1526 (3)
0.0441 (3)
−0.0271
0.0304
0.0636 (3)
−0.0042
0.0682
0.2286 (4)
0.2938
0.15577 (5)
0.27822 (11)
0.07162 (11)
0.20445 (11)
0.34274 (11)
0.3986 (4)
0.462 (5)
0.4188 (3)
0.373 (6)
0.2180 (4)
0.4612 (3)
−0.0416 (4)
−0.5525 (4)
−0.6843 (4)
−1.2152 (4)
0.1899 (4)
0.1479 (5)
0.0463
0.1282
0.2508 (5)
0.1979
0.2670
0.3239 (6)
0.4277
0.3308
0.2837
0.3476 (4)
0.4690 (4)
0.4303
0.5793
0.3757 (4)
0.3895
0.2638
0.5857 (5)
0.5502
0.42882 (2)
0.34505 (4)
0.37564 (4)
0.50658 (4)
0.48156 (4)
0.25882 (13)
0.277 (2)
0.66339 (11)
0.658 (2)
0.28469 (12)
0.55174 (11)
0.42704 (12)
0.38299 (13)
0.38951 (13)
0.35773 (14)
0.33010 (14)
0.27017 (16)
0.2880
0.2324
0.28404 (17)
0.2741
0.3220
0.24694 (16)
0.2624
0.2161
0.2372
0.51757 (14)
0.58335 (14)
0.5628
0.5924
0.63208 (14)
0.6524
0.6230
0.55967 (17)
0.5840
0.03058 (16)
0.0337 (2)
0.0327 (2)
0.0332 (2)
0.0349 (2)
0.0546 (8)
0.082*
0.0447 (7)
0.067*
0.0346 (7)
0.0305 (7)
0.0325 (7)
0.0377 (8)
0.0363 (7)
0.0437 (8)
0.0291 (8)
0.0396 (9)
0.048*
0.048*
0.0472 (10)
0.057*
0.057*
0.0473 (11)
0.071*
0.071*
0.071*
0.0293 (8)
0.0329 (8)
0.040*
0.040*
0.0348 (8)
0.042*
0.042*
0.0424 (10)
0.064*
Acta Cryst. (2017). E73, 1458-1464
sup-2
supporting information
H8B
H8C
C9
H9
C10
H10
C11
C12
H12
C13
H13
C14
H14
C15
H15
C16
C17
H17
C18
H18
C19
H19
C20
H20
0.1926
0.2577
0.3348 (3)
0.3551
0.4029 (3)
0.4690
0.3752 (3)
0.2771 (4)
0.2538
0.2146 (4)
0.1477
0.4440 (3)
0.5072
0.4595 (3)
0.3919
0.5253 (3)
0.6222 (3)
0.6453
0.6836 (3)
0.7498
0.5620 (4)
0.5398
0.4943 (4)
0.4281
0.6778
0.6125
−0.0675 (4)
0.0079
−0.1992 (5)
−0.2131
−0.3110 (4)
−0.2850 (6)
−0.3591
−0.1507 (5)
−0.1343
−0.4535 (4)
−0.4724
−0.7935 (4)
−0.7803
−0.9406 (4)
−0.9662 (4)
−0.8902
−1.1017 (4)
−1.1169
−1.1910 (5)
−1.2707
−1.0576 (5)
−1.0462
0.5739
0.5265
0.46063 (15)
0.4868
0.45873 (15)
0.4832
0.42118 (14)
0.38681 (19)
0.3606
0.39140 (19)
0.3675
0.41878 (15)
0.4444
0.35868 (15)
0.3350
0.35960 (14)
0.39506 (15)
0.4207
0.39256 (15)
0.4169
0.32486 (18)
0.3004
0.32386 (18)
0.2993
0.064*
0.064*
0.0366 (9)
0.044*
0.0364 (9)
0.044*
0.0320 (8)
0.0553 (13)
0.066*
0.0557 (13)
0.067*
0.0341 (8)
0.041*
0.0328 (8)
0.039*
0.0315 (8)
0.0329 (8)
0.039*
0.0349 (8)
0.042*
0.0481 (11)
0.058*
0.0447 (10)
0.054*
Atomic displacement parameters (Å2)
Zn
S1
S2
S3
S4
O1
O2
N1
N2
N3
N4
N5
N6
C1
C2
C3
C4
C5
C6
C7
U11
U22
U33
U12
U13
U23
0.0318 (3)
0.0302 (5)
0.0322 (5)
0.0317 (5)
0.0351 (5)
0.055 (2)
0.0492 (17)
0.0365 (17)
0.0322 (16)
0.0324 (16)
0.0312 (17)
0.0290 (16)
0.0402 (19)
0.0294 (18)
0.036 (2)
0.037 (2)
0.055 (3)
0.0303 (19)
0.0304 (18)
0.043 (2)
0.0277 (3)
0.0343 (5)
0.0286 (5)
0.0317 (5)
0.0321 (5)
0.0464 (18)
0.0422 (17)
0.0351 (17)
0.0243 (15)
0.0309 (16)
0.0334 (18)
0.0309 (17)
0.0330 (18)
0.0252 (17)
0.038 (2)
0.053 (3)
0.055 (3)
0.0264 (18)
0.0319 (19)
0.0253 (18)
0.0314 (3)
0.0365 (5)
0.0366 (5)
0.0360 (5)
0.0381 (5)
0.0575 (19)
0.0404 (15)
0.0314 (16)
0.0347 (16)
0.0332 (16)
0.0484 (19)
0.0480 (19)
0.056 (2)
0.0321 (19)
0.042 (2)
0.049 (2)
0.031 (2)
0.0300 (18)
0.0366 (19)
0.037 (2)
0.00704 (16)
0.0010 (4)
0.0015 (4)
−0.0020 (4)
−0.0023 (4)
0.0100 (15)
0.0154 (13)
0.0016 (14)
0.0031 (12)
0.0054 (13)
0.0091 (14)
0.0063 (13)
0.0101 (15)
0.0043 (14)
−0.0015 (17)
−0.0003 (19)
−0.002 (2)
0.0070 (14)
0.0075 (15)
0.0048 (16)
−0.00087 (18)
0.0022 (4)
−0.0014 (4)
0.0025 (4)
0.0063 (4)
−0.0213 (15)
−0.0074 (13)
−0.0011 (13)
0.0012 (13)
−0.0014 (13)
0.0029 (14)
−0.0007 (14)
−0.0052 (16)
0.0007 (15)
−0.0091 (18)
−0.0100 (19)
0.0009 (19)
−0.0034 (15)
0.0035 (15)
0.0075 (17)
−0.00366 (16)
−0.0003 (4)
0.0018 (4)
−0.0042 (4)
−0.0061 (4)
0.0022 (15)
−0.0085 (13)
0.0012 (13)
−0.0011 (13)
−0.0044 (13)
−0.0042 (15)
−0.0040 (15)
−0.0051 (16)
−0.0046 (15)
−0.0033 (17)
0.003 (2)
0.0096 (19)
0.0004 (14)
−0.0026 (16)
−0.0026 (16)
Acta Cryst. (2017). E73, 1458-1464
sup-3
supporting information
C8
C9
C10
C11
C12
C13
C14
C15
C16
C17
C18
C19
C20
0.042 (2)
0.040 (2)
0.033 (2)
0.0304 (19)
0.049 (3)
0.052 (3)
0.0252 (18)
0.0259 (18)
0.0267 (18)
0.0304 (19)
0.0301 (19)
0.046 (2)
0.034 (2)
0.033 (2)
0.033 (2)
0.033 (2)
0.0296 (19)
0.051 (3)
0.049 (3)
0.033 (2)
0.034 (2)
0.0282 (19)
0.0283 (19)
0.034 (2)
0.038 (2)
0.038 (2)
0.054 (2)
0.035 (2)
0.041 (2)
0.0359 (19)
0.060 (3)
0.060 (3)
0.044 (2)
0.038 (2)
0.040 (2)
0.039 (2)
0.040 (2)
0.058 (3)
0.059 (3)
−0.0107 (17)
0.0047 (17)
0.0076 (16)
0.0018 (15)
0.022 (2)
0.025 (2)
0.0046 (15)
0.0058 (15)
0.0012 (15)
−0.0001 (15)
0.0022 (16)
0.0056 (19)
0.0025 (17)
0.0106 (19)
−0.0052 (17)
−0.0083 (17)
0.0028 (16)
−0.022 (2)
−0.027 (2)
0.0017 (16)
0.0007 (15)
0.0032 (15)
0.0001 (16)
−0.0017 (16)
−0.007 (2)
−0.0106 (19)
−0.0143 (19)
−0.0039 (16)
0.0012 (17)
−0.0006 (16)
−0.030 (2)
−0.021 (2)
0.0054 (17)
0.0005 (17)
−0.0001 (16)
−0.0018 (16)
0.0025 (17)
−0.013 (2)
−0.010 (2)
Geometric parameters (Å, º)
Zn—S1
Zn—S2
Zn—S3
Zn—S4
Zn—N3
S1—C1
S2—C1
S3—C5
S4—C5
O1—C3
O1—H1O
O2—C7
O2—H2O
N1—C1
N1—C4
N1—C2
N2—C5
N2—C6
N2—C8
N3—C13
N3—C9
N4—C14
N4—N5
N5—C15
N6—C19
N6—C18
C2—C3
C2—H2A
C2—H2B
C3—H3A
C3—H3B
Acta Cryst. (2017). E73, 1458-1464
2.4152 (12)
2.5152 (11)
2.3890 (12)
2.5162 (11)
2.068 (3)
1.726 (4)
1.705 (4)
1.720 (4)
1.711 (4)
1.426 (5)
0.841 (10)
1.428 (5)
0.838 (10)
1.331 (5)
1.468 (5)
1.469 (5)
1.331 (5)
1.456 (5)
1.461 (5)
1.330 (5)
1.337 (5)
1.267 (5)
1.405 (4)
1.267 (5)
1.329 (5)
1.344 (5)
1.506 (6)
0.9900
0.9900
0.9900
0.9900
C4—H4A
C4—H4B
C4—H4C
C6—C7
C6—H6A
C6—H6B
C7—H7A
C7—H7B
C8—H8A
C8—H8B
C8—H8C
C9—C10
C9—H9
C10—C11
C10—H10
C11—C12
C11—C14
C12—C13
C12—H12
C13—H13
C14—H14
C15—C16
C15—H15
C16—C20
C16—C17
C17—C18
C17—H17
C18—H18
C19—C20
C19—H19
C20—H20
0.9800
0.9800
0.9800
1.495 (5)
0.9900
0.9900
0.9900
0.9900
0.9800
0.9800
0.9800
1.378 (5)
0.9500
1.382 (5)
0.9500
1.387 (5)
1.460 (5)
1.369 (6)
0.9500
0.9500
0.9500
1.470 (5)
0.9500
1.389 (5)
1.393 (5)
1.364 (5)
0.9500
0.9500
1.383 (6)
0.9500
0.9500
sup-4
supporting information
N3—Zn—S3
N3—Zn—S1
S1—Zn—S3
N3—Zn—S2
S3—Zn—S2
S1—Zn—S2
N3—Zn—S4
S3—Zn—S4
S1—Zn—S4
S2—Zn—S4
C1—S1—Zn
C1—S2—Zn
C5—S3—Zn
C5—S4—Zn
C3—O1—H1O
C7—O2—H2O
C1—N1—C4
C1—N1—C2
C4—N1—C2
C5—N2—C6
C5—N2—C8
C6—N2—C8
C13—N3—C9
C13—N3—Zn
C9—N3—Zn
C14—N4—N5
C15—N5—N4
C19—N6—C18
N1—C1—S2
N1—C1—S1
S2—C1—S1
N1—C2—C3
N1—C2—H2A
C3—C2—H2A
N1—C2—H2B
C3—C2—H2B
H2A—C2—H2B
O1—C3—C2
O1—C3—H3A
C2—C3—H3A
O1—C3—H3B
C2—C3—H3B
H3A—C3—H3B
N1—C4—H4A
N1—C4—H4B
H4A—C4—H4B
N1—C4—H4C
H4A—C4—H4C
Acta Cryst. (2017). E73, 1458-1464
117.15 (9)
106.36 (9)
136.48 (4)
101.88 (9)
96.05 (4)
73.10 (4)
102.55 (9)
73.47 (4)
99.01 (4)
155.56 (4)
85.88 (13)
83.17 (12)
85.07 (13)
81.33 (12)
111 (4)
118 (4)
120.9 (3)
122.2 (3)
116.9 (3)
122.3 (3)
121.5 (3)
116.2 (3)
116.9 (3)
119.8 (3)
123.3 (2)
111.6 (3)
112.1 (3)
116.3 (3)
122.4 (3)
119.8 (3)
117.8 (2)
112.3 (3)
109.2
109.2
109.2
109.2
107.9
112.1 (4)
109.2
109.2
109.2
109.2
107.9
109.5
109.5
109.5
109.5
109.5
N2—C6—H6A
C7—C6—H6A
N2—C6—H6B
C7—C6—H6B
H6A—C6—H6B
O2—C7—C6
O2—C7—H7A
C6—C7—H7A
O2—C7—H7B
C6—C7—H7B
H7A—C7—H7B
N2—C8—H8A
N2—C8—H8B
H8A—C8—H8B
N2—C8—H8C
H8A—C8—H8C
H8B—C8—H8C
N3—C9—C10
N3—C9—H9
C10—C9—H9
C9—C10—C11
C9—C10—H10
C11—C10—H10
C10—C11—C12
C10—C11—C14
C12—C11—C14
C13—C12—C11
C13—C12—H12
C11—C12—H12
N3—C13—C12
N3—C13—H13
C12—C13—H13
N4—C14—C11
N4—C14—H14
C11—C14—H14
N5—C15—C16
N5—C15—H15
C16—C15—H15
C20—C16—C17
C20—C16—C15
C17—C16—C15
C18—C17—C16
C18—C17—H17
C16—C17—H17
N6—C18—C17
N6—C18—H18
C17—C18—H18
N6—C19—C20
109.0
109.0
109.0
109.0
107.8
113.1 (3)
109.0
109.0
109.0
109.0
107.8
109.5
109.5
109.5
109.5
109.5
109.5
122.5 (3)
118.7
118.7
120.0 (3)
120.0
120.0
117.4 (3)
121.4 (3)
121.2 (3)
118.8 (4)
120.6
120.6
124.4 (4)
117.8
117.8
120.9 (3)
119.5
119.5
119.9 (3)
120.1
120.1
117.7 (3)
120.7 (3)
121.6 (3)
119.2 (3)
120.4
120.4
124.0 (3)
118.0
118.0
124.3 (4)
sup-5
supporting information
H4B—C4—H4C
N2—C5—S4
N2—C5—S3
S4—C5—S3
N2—C6—C7
109.5
120.7 (3)
121.7 (3)
117.7 (2)
113.0 (3)
N6—C19—H19
C20—C19—H19
C19—C20—C16
C19—C20—H20
C16—C20—H20
117.8
117.8
118.5 (4)
120.8
120.8
C14—N4—N5—C15
C4—N1—C1—S2
C2—N1—C1—S2
C4—N1—C1—S1
C2—N1—C1—S1
Zn—S2—C1—N1
Zn—S2—C1—S1
Zn—S1—C1—N1
Zn—S1—C1—S2
C1—N1—C2—C3
C4—N1—C2—C3
N1—C2—C3—O1
C6—N2—C5—S4
C8—N2—C5—S4
C6—N2—C5—S3
C8—N2—C5—S3
Zn—S4—C5—N2
Zn—S4—C5—S3
Zn—S3—C5—N2
Zn—S3—C5—S4
C5—N2—C6—C7
C8—N2—C6—C7
N2—C6—C7—O2
C13—N3—C9—C10
170.1 (4)
178.3 (3)
−0.6 (5)
−0.1 (5)
−179.1 (3)
−175.9 (3)
2.55 (18)
175.9 (3)
−2.64 (19)
92.4 (4)
−86.6 (4)
59.9 (4)
−179.6 (2)
0.3 (5)
2.3 (5)
−177.8 (3)
−163.6 (3)
14.54 (17)
162.9 (3)
−15.21 (18)
86.1 (4)
−93.8 (4)
56.2 (4)
0.8 (6)
Zn—N3—C9—C10
N3—C9—C10—C11
C9—C10—C11—C12
C9—C10—C11—C14
C10—C11—C12—C13
C14—C11—C12—C13
C9—N3—C13—C12
Zn—N3—C13—C12
C11—C12—C13—N3
N5—N4—C14—C11
C10—C11—C14—N4
C12—C11—C14—N4
N4—N5—C15—C16
N5—C15—C16—C20
N5—C15—C16—C17
C20—C16—C17—C18
C15—C16—C17—C18
C19—N6—C18—C17
C16—C17—C18—N6
C18—N6—C19—C20
N6—C19—C20—C16
C17—C16—C20—C19
C15—C16—C20—C19
−179.6 (3)
−0.2 (6)
−0.7 (6)
−178.6 (4)
0.8 (7)
178.8 (5)
−0.6 (8)
179.8 (4)
−0.2 (9)
−176.8 (3)
−177.2 (4)
4.9 (6)
179.5 (3)
−175.7 (4)
2.4 (6)
1.4 (6)
−176.8 (3)
−1.1 (6)
−0.4 (6)
1.5 (7)
−0.5 (7)
−1.0 (6)
177.2 (4)
Hydrogen-bond geometry (Å, º)
Cg1 is the centroid of the Zn/S1/S2/C1 ring.
D—H···A
i
O1—H1O···O2
O2—H2O···N6ii
C20—H20···O1iii
C6—H6B···Cg1i
D—H
H···A
D···A
D—H···A
0.85 (5)
0.84 (4)
0.95
0.99
1.92 (5)
1.95 (4)
2.32
2.59
2.721 (5)
2.769 (5)
3.233 (6)
3.540 (4)
158 (5)
163 (5)
162
162
Symmetry codes: (i) −x, −y+1, −z+1; (ii) −x+1, −y−1, −z+1; (iii) −x, y−3/2, −z+1/2.
Acta Cryst. (2017). E73, 1458-1464
sup-6