Coupled Cluster Benchmark of New Density Functionals
and of Domain Pair Natural Orbital Methods: Mechanisms
of Hydroarylation and Oxidative Coupling Catalyzed by
Ru(II) Chloride Carbonyls
Irena Efremenko1 and Jan M.L. Martin1, a)
1
Department of Organic Chemistry, Weizmann Institute of Science, 76100 Reḥovot, Israel
a)
Corresponding author: gershom@weizmann.ac.il
Abstract. In the present work we tested the performance of several new functionals for studying the mechanisms of
concurrent reaction of hydroarylation and oxidative coupling catalyzed by Ru(II) chloride carbonyls. We find that DLPNOCCSD(T) is an acceptable substitute for full canonical CCSD(T) calculations; that the recent ωB97X-V and ωB97M-V
functionals exhibit superior performance to commonly used DFT functionals; and that the revised DSD-PBEP86 double
hybrid represents an improvement over the original, even though transition metals were not involved in its parametrization.
INTRODUCTION
Synthetic methods allowing one-step C-C bond formation through homogenous-catalyst-mediated transformation
of C-H bonds have become increasingly important in both industry and academia.1,2 Potential routes for selective CH bond activation and subsequent C-C bond formation in alkenes and aromatic compounds include hydroarylation by
addition of aromatic C–H bonds across an unsaturated C=C bond, or an oxidative coupling that preserves the double
bond. The latter reaction, while a highly desirable industrial goal, is challenging from the synthetic point of view.
Pioneering examples of Ru-catalyzed coupling of aromatic carbon-hydrogen bonds with olefins were reported two
decades ago.3,4 Since then (for a review, see Ref. 2), an increasing number of examples catalyzed by Rh, Ru and Pd
have been published, but the mechanistic aspects of the reactions have only been addressed by experimental methods.
Motivated by the experimental results of Milstein and coworkers,4 over a decade ago we started to explore the
mechanisms of the concurrent reactions of oxidative coupling and hydroarylation of methyl acrylate (MA) catalyzed
by Ru carbonyl complexes (Scheme 1) using hybrid and double hybrid DFT families. These calculations showed that
either proton elimination by chloride ion, or hydrogen transfer to coordinated olefin, can serve as the initial step of
aromatic C-H bond activation, while oxidative addition mechanism could be excluded. Proton elimination proceeds
via transition state TS1 and initiates
COOMe
oxidative
coupling with olefin (TS2)
COOMe
+
+
COOMe
according
to Scheme 2a. Next,
methyl
oxidative
cinnamate
coupling
interaction of Ru hydride intermediate
E
isomer
RuCl2, CO
(1)
+
Int3 with MA and HCl regenerates the
COOMe
180oC
methyl acrylate
initial
RuCl2
carbonyl
(TS4a).
COOMe
hydroCOOMe
(MA)
arylation
Alternatively,
the
catalytic
cycle
could
or
methyl
be closed by interaction of Int3 with
hydrocinnamate
(2)
(3)
linear
branched
MA and benzene, yielding Int1 (TS4b).
Scheme 1. Possible interactions between MA and benzene in presence of Hydrogen transfer to MA (TS1a and
TS1b) causes coexistence of phenyl and
Ru(II) chloride carbonyl complexes in benzene solution: oxidative
one of the two isomeric alkyl ligands in
coupling (observed) and hydroarylation (not observed).
the Ru coordination sphere (Int4 and Int5). This mainly leads to the hydroarylation products via TS3 and TS3a
(Scheme 2,b), but coordination of the second olefin molecule followed by oxidative coupling is also possible.
Scheme 2. Mechanisms of MA interactions with benzene in presence of Ru(II) chloride carbonyl complexes: oxidative
coupling (a) and hydroarylation (b).
We found that the activation barriers, the relative
energies of the key intermediates, and the overall
RuCl2
RuCl2
RuCl2
direction of the catalytic reaction strongly depend on
CO CO
CO
R
R
R
the composition of the Ru coordination sphere. Ru
Cl
complexes that could form in the reaction mixture, and
CO
serve as initial species of catalytic cycles ,are shown in
RuCl2
RuCl2
RuCl
Cl2Ru
RuCl2
CO
OC
OC
CO
Scheme 3. In all the complexes, chloride anions are
OC
CO
CO
CO
CO
strongly bound to the metal atom; the only exception is
Ru(CO)2Cl2
RuCl2(CO)4(benzene) (rightmost complex in the 2nd
Ru(CO)Cl2
Ru(CO)4Cl2
Ru(CO)3Cl2
row of Scheme 3) showing CO insertion into one of the
Ru-Cl bonds. Moreover, the energetic results,
O
O
O
R
particularly calculated activation barriers, differ
O
O
O
RuCl2
RuCl2
RuCl2
Ru
between computational approaches and were hard to
CO
OC
Cl2
OC
CO
CO
CO
reconcile with experimental observations.
Therefore, for this specific case, we will attempt to Scheme 3. Calculated RuCl2 complexes with benzene, CO
obtain rigorous first-principles results by means of and MA. Arrows indicate that complex [RuCl2(benzene)] is
coupled cluster theory near the complete basis set limit, used as a reference.
and use these results to assess the performance of more affordable computational methods. We believe our results
have broader relevance for modeling mechanisms of catalytic reactions mediated by transition metal complexes.
The CCSD(T) method5 is considered the “gold standard” of quantum chemistry. However, the computational cost
of canonical CCSD(T) calculations scales as O(N7) and becomes prohibitively high for mechanistic studies of practical
transition metal catalysis problems. Recently developed domain pair natural orbital methods, such as DLPNOCCSD(T) of Neese and coworkers6 and PNO-LCCSD(T) of Werner and coworkers,7 scale almost linearly with system
size (at least for closed-shell cases) and, in the main group, provide similar accuracy to the corresponding canonical
calculation. Recently, benchmark studies of the performance of density functionals for transition metal problems,
using DLPNO-CCSD(T) for calibration, have started appearing for reaction energies8 and barrier heights.9 Since the
Ru complexes shown in Schemes 2 and 3 are still barely tractable by canonical methods, this enables us to assess the
“domain error” for real-size transition metal complexes. In this paper, we assess both DFT and PNO methods against
canonical CCSD(T) for the hydroarylation and oxidative coupling of benzene and methyl acrylate (MA) catalyzed by
RuCl2-carbonyl complexes, as a representative example for the complex mechanisms of homogeneous catalytic
reactions.
Having in mind specific computational problems usually addressed in such mechanistic studies, the calculations
were divided into four groups: (i) overall reaction energies (Scheme 1) that do not involve transition metals; (ii)
relative energies of stable RuCl2 complexes with CO, benzene and MA (Scheme 3) that should reproduce breaking
and formation of the metal-ligand bonds and deep alterations of the coordination sphere and electronic structure of the
metal atom; (ii) energies of key intermediates along reaction pathways catalyzed by different Ru complexes (Scheme
2) and (iv) barrier heights along these reaction pathways. It would be natural to calculate relative energies of the
carbonyl complexes relative to RuCl2, however, our calculations revealed that it has a triplet ground state, and that the
singlet is essentially purely biradical (which is also reflected in the pathological D1 diagnostic10 value of 0.435).
Discussion of the open-shell calculations are beyond the scope of this preliminary report; therefore, we used
RuCl2(benzene) as a reference, as RuCl2 will anyway have no independent existence under the experimental conditions
(benzene solvent). At all levels, 1:1 exchange of benzene with CO or MA is energetically unfavorable; all other
complexes are exothermic with respect to the reference. The relative energies of key intermediates and transition states
along each reaction path were calculated relative to the initial form of the catalyst, (C6H6)(CO)nRuCl2 (n=0-4).
COMPUTATIONAL METHODS
The Weigend-Ahlrichs basis set family11 def2-TZVP, def2-TZVPP, and def2-QZVPP was used throughout.
Reference geometries were optimized at the PBE0-D3BJ/def2-TZVP level12,13 using Gaussian 09;14 identities of
transition states were verified by frequency and intrinsic reaction coordinate calculations.
At the final geometries, canonical CCSD(T)/def2-TZVPP single-point energy calculations were performed using
MOLPRO 2018,15 both using default frozen cores and including Ru(4s,4p) subvalence orbitals (which are correlated
by default in ORCA. We found in this work that the mean absolute effects of Ru(4s,4p) subvalence correlation on
carbonyl ligand energies and transition states are both a nontrivial 1.0 kcal/mol.) DLPNO-CCSD(T)16 and the version
with improved iterative triples, DLPNO-CCSD(T1),17 were calculated with the def-TZVPP basis set using ORCA,18
likewise DLPNO-CCSD(T)/def2-QZVPP calculations were done for basis set extrapolation using the simple L–3
formula.19 TightPNO cutoffs20 were used to reduce domain discretization error; we found in the present work that
DefaultPNO causes errors up to 3.5 kcal/mol in energy differences, and hence do not recommend its use.
In addition, single-point DFT calculations with a number of DFT functionals were carried out using ORCA. Aside
from PBE0 already mentioned, these include: (a) the Berkeley “combinatorially optimized” 21 B97M-V, ωB97X-V
and ωB97M-V; (b) the M06 family:22 M06-L, M06 and M06-2X; (c) TPSS23 and two different hybrids thereof,
namely, TPSSh and TPSS0 (10% and 25% HF exchange, respectively); (d) both the original double-hybrid DSDPBEP86-D3BJ24 and its reparametrized version revDSD-PBEP86-D4;25 in the latter, D3BJ also replaced with the very
recently published next-generation D4 model.26 As basis set convergence of double hybrids tends to be dominated by
the MP2-like term, we carried out def2-TZVPP and def2-QZVPP calculations and applied L–3 basis set extrapolation;27
for the remaining DFT functionals we applied def2-TZVPP except for ωB97, which were accurate enough that we
also tried def2-QZVPP. (Changes are on the order of 1 kcal/mol.) GRID6 was used in all DFT calculations.
In all Orca calculations, the RIJCOSX approximation28 was employed, as well as the RI-MP2 approximation29 for
the double hybrids, in conjunction with the respective appropriate auxiliary basis sets30 ,31 for the def2 family.
RESULTS AND DISCUSSION
MAD (mean absolute deviation) and RMSD (root mean square deviation) error statistics with respect to our best
CCSD(T) basis set limit estimates are shown in Figure 1 for the four types of energy differences. As expected, the
smallest deviations were found for the overall reaction energies, which involve only main group elements. The hybrid
functionals of the M06 family (MAD=0.68 and 0.57 kcal/mol for M06 and M06-2X, respectively) and double hybrid
revDSD-PBEP86 functionals (MAD=0.64) show the best performance in this group. However, overall for the four
criteria, the best results were obtained using ωB97M-V and ωB97X-V range-separated hybrids as well as by the
revDSD-PBEP86 double hybrid, with accuracy between DLPNO-CCSD and DLPNO-CCSD(T). On the 3rd rung
(meta-GGA) of the Jacob’s Ladder, B97M-V performed best for reaction energies and carbonyl complex stabilities;
however, M06-L showed similar performance, and TPSS outperformed them for barrier heights (MAD 3.69 vs. 4.54
for M06-L and 5.47 for B97M-V). The revDSD-PBEP86 functional outperforms the original DSD-PBEP86 for all
four groups of calculations, whereas DSD-SCAN-D4 improved on DSD-PBEP86-D3BJ only for the carbonyl
complexes. The DLNPO-CCSD(T) approach shows very close agreement (MAD=0.35 kcal/mol) with canonical
CCSD(T) for the reaction energies, while for other groups there is a bit more daylight between them (MAD=1.04 for
carbonyls, 1.56 for intermediates, and 1.58 kcal/mol for TSes). Using the DLNPO-CCSD(T1) approach with improved
perturbative triples decreases these statistics to 0.60, 0.80, and 1.02 kcal/mol, respectively. The RMSD/MAD ratios
are close to the theoretical value32 (for a normal distribution) of √(π/2)≈1.2533, for carbonyls and intermediates but
much larger for TSes, indicating an outlier (RMSD=0.80, 0.86, 2.05 kcal/mol): we note that TS2-CO2 is essentially
biradical (and has D1>0.4). If we exclude it, MAD and RMSD drop to quite pleasing values of 0.63 and 0.73 kcal/mol,
respectively.
TSes
minima
CO ∆E_ligand
∆Ee,reac
TSes
minima
EM
E- P2
E- CCS
CC D
SD
(T
)
3B
J
TP
E0
-D
PB
D
D
D
0
06 6
-2
X
M
M
M
0D
PB
E
CO ∆E_ligand
D
0.00
D
0.00
D
3.00
B9
7M
B9 -V
w 7X
B9 -V
D
7M
SD
-P
-V
BE
re P8
vD 6
SD D
3
D -P BJ
SD B
-S EP8
CA 6
N
D
4
6.00
3.00
w
6.00
S
TP S
SS
h
SC TP
A SS
N
0
D
3B
J
9.00
EM
E- P2
C
E- CS
CC D
SD
(T
)
9.00
B9
7
w MB9 V
w 7X
B9 -V
D
7M
SD
-P
-V
BE
re P8
vD 6
SD -D
3
D -P BJ
SD BE
-S P8
CA 6
N
D
4
12.00
06
L
12.00
3B
J
TP
S
TP S
SS
h
SC TP
A SS
N
0
D
3B
J
15.00
M
06
L
M
M 06
06
-2
X
MAD relative to CCSD(T)/CBS (kcal/mol)
RMSD relative to CCSD(T)/CBS (kcal/mol)
15.00
∆Ee,reac
Figure 1. RMSD and MAD relative to CCSD(T)/CBS for the four types of energetics considered.
At all levels except for DLPNO-MP2, the highest RMSD and MAD values were found for the first reaction, i.e.
dissociation of benzene and association of CO and MA ligands. Most density functionals tend to overbind the ligands;
detailed analysis shows that for one group of functionals (PBE0-D3BJ, SCAN-D3BJ, TPSS, M06L and DSD-PBEP86
family, Fig. 2a) the error becomes greater with increasing number of CO ligands; the other group (M06, M06-2X,
TPSS0, TPSSh, and B97, Fig. 2b) exhibits a less pronounced opposite trend, especially in the presence of coordinated
benzene.
Carbonyls: Energy Deviation relative to CCSD(T)/CBS (kcal/mol)
10
PBE0-D3BJ
SCAN D3BJ
DSD-PBEP86-D3BJ
revDSD-PBEP86
DSD-SCAN D4
M06L
a
b
5
TPSS
Number of CO ligands (n)
Number of CO ligands (n)
0
0
2
3
4
0
1
2
3
4
0
1
2
3
0
1
2
1
ΔE, kcal/mol
ΔE, kcal/mol
1
-10
-20
2
3
4
0
1
2
3
4
0
2
3
0
1
2
-5
-10
(C6H6)
(CO)nRuCl2
-30
(MA)
(CO)nRuCl2
-15
(CO)nRuCl2
-40
1
(C6H6)
(CO)nRuCl2
(MA)
(CO)nRuCl2
(C6H6)(MA)
(CO)nRuCl2
-20
(CO)nRul2
M06
M06-2X
B97M-V
wB97M-V
TPSS0
TPSSh
wB97X-V
(C6H6)(MA)
(CO)nRuCl2
Figure 2. Energy deviation relative to CCSD(T)/CBS in different RuCl2 (CO)n complexes as a function of n.
Our findings are consistent (see also our companion paper in the present volume) with the findings of Najibi and
Goerigk33 and ourselves25 for the very large GMTKN55 main-group benchmark34 and of Iron and Janes9 for the
MOBH35 transition metal reaction benchmark: Notably, that the range-separated hybrids ωB97X-V and ωB97M-V
acquit themselves particularly well, that revDSD represents an improvement over the original DSD not just for the
main group but also transition metals, and that unlike for the main group where empirical double hybrids are clearly
superior, they offer no clear advantage over ωB97M-V for transition metal reactions. Unlike Iron and Janes, however,
who found the new DSD-SCAN double hybrid25 to be among the best performers for MOBH35, we find it to be
inferior to revDSD-PBEP86 and the ωB97n-V family for the present problem (Figure 1).
ACKNOWLEDGMENTS
This research was supported by the Israel Science Foundation (grant 1358/15), the Minerva Foundation, and the
Helen and Martin Kimmel Center for Molecular Design (Weizmann Institute of Science).
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