Deeply Profiled Cell Lines

All Uniform batch growth

Assay

Cell Line (batch identifier)

	intact Hi-C	PRO-cap	ATAC-seq	DNase-seq	ChIA-PET	Bru-seq	BruChase-seq	BruUV-seq	long read RNA-seq	microRNA-seq	total RNA-seq	snATAC-seq
A673	1	1		1	2	2	2	1	1	1	1	1
ENCBS564CLS	1	1			2	2	2	1	1	1	1
ENCBS826LEP		1		1	1	2	2	1	1	1	1	1

Caco-2	1	1		1	2	2	2	1	1	1	1	1
ENCBS095ZZD	1	1		1	2	2	2	1	1	1	1
ENCBS072CVQ		1		1		2	2	1	1	1	1	1

Calu3	1	1		1	1	2	2	1	1	1	1	1
ENCBS992CLK	1	1		1	1	2	2	1	1	1	1
ENCBS961PLX		1		1		2	2	1	1	1	1	1

GM12878	1		1			2	2	1	1	1	1	1
ENCBS978MLY	1		1			2	2	1	1	1	1	1
ENCBS110BUW			1			2	2	1

HCT116	1		1			2	2	1	1	1	1	1
ENCBS831RKD	1		1			2	2	1	1	1	1	1
ENCBS851BDM			1			2	2	1

HepG2	1		1			2	2	1	1	1	1	1
ENCBS193JTP	1		1			2	2	1	1	1	1	1
ENCBS041EUO			1			2	2	1

IMR-90	1		1			2	2	1	1	1	1	1
ENCBS611WWO	1		1			2	2	1	1	1	1
ENCBS597AKG			1			2	2	1				1

K562	1		1			2	2	1	1	1	1	1
ENCBS327ZDR	1		1			2	2	1	1	1	1
ENCBS708GCD			1			2	2	1				1

MCF 10A	1	1				2	2	1	1	1	1	1
ENCBS401NZE	1	1				2	2	1	1	1	1
ENCBS967KPZ		1				2	2	1	1	1	1	1

MCF-7	1		1			2	2	1	1	1	1	1
ENCBS820EFY	1		1			2	2	1	1	1	1	1
ENCBS986JFA			1			2	2	1

OCI-LY7	1				2	2	2	1	1	1	1	1
ENCBS149SHY	1				1	2	2	1	1	1	1	1
ENCBS928AXI					1	2	2	1	1	1	1

PC-3	1		1		2	2	2	1	1	1	1	1
ENCBS388XJL	1		1			2	2	1	1	1	1	1
ENCBS533AYC			1		1	2	2	1
ENCBS042UWP					1

PC-9	1			1	2	2	2	1	1	1	1	1
ENCBS739NKR	1			1	2	2	2	1	1	1	1
ENCBS364OBG				1	1	2	2	1	1	1	1	1

Panc1	1		1		2	2	2	1	1	1	1	1
ENCBS378LMT	1		1		2	2	2	1	1	1	1	1
ENCBS254ODH			1		2	2	2	1

endothelial cell of umbilical vein	1	1				2	2	1	1	1	1	1
ENCBS269GQI		1				2	2	1	1	1	1	1
ENCBS066FEH	1					2	2	1	1	1	1

mammary epithelial cell	1			1	1	2	2	1	1	1	1
ENCBS956YQM	1				1	2	2	1	1	1	1
ENCBS110HEL				1		2	2	1	1	1	1