Download MendeleyStructural complex of neuropeptide Y receptor 1
Shen, S.Y., Shao, Z.H.To be published.
8K6M
Structural complex of neuropeptide Y receptor 1
- PDB DOI: https://doi.org/10.2210/pdb8K6M/pdb
- EM Map EMD-36923: EMDB EMDataResource
- Classification: MEMBRANE PROTEIN
- Organism(s): Homo sapiens, Mus musculus
- Expression System: Spodoptera frugiperda
- Mutation(s): Yes
- Membrane Protein: Yes PDBTM
- Deposited: 2023-07-25 Released: 2024-07-31
- Funding Organization(s): Other government
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 3.30 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Guanine nucleotide-binding protein G(i) subunit alpha-2 | 355 | Homo sapiens | Mutation(s): 5 Gene Names: GNAI2, GNAI2B Membrane Entity: Yes |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P04899 (Homo sapiens) Explore P04899 Go to UniProtKB: P04899 | |||||
PHAROS: P04899 GTEx: ENSG00000114353 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P04899 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | 356 | Homo sapiens | Mutation(s): 0 Gene Names: GNB1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P62873 (Homo sapiens) Explore P62873 Go to UniProtKB: P62873 | |||||
PHAROS: P62873 GTEx: ENSG00000078369 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P62873 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | 71 | Homo sapiens | Mutation(s): 0 Gene Names: GNG2 Membrane Entity: Yes |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P59768 (Homo sapiens) Explore P59768 Go to UniProtKB: P59768 | |||||
PHAROS: P59768 GTEx: ENSG00000186469 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P59768 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 4 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Neuropeptide Y receptor type 1 | 349 | Homo sapiens | Mutation(s): 0 Gene Names: NPY1R, NPYR, NPYY1 Membrane Entity: Yes |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P25929 (Homo sapiens) Explore P25929 Go to UniProtKB: P25929 | |||||
PHAROS: P25929 GTEx: ENSG00000164128 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P25929 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 5 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| scFV16 | E [auth S] | 266 | Mus musculus | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 6 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Neuropeptide Y | F [auth E] | 36 | Homo sapiens | Mutation(s): 0 Membrane Entity: Yes |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01303 (Homo sapiens) Explore P01303 Go to UniProtKB: P01303 | |||||
PHAROS: P01303 GTEx: ENSG00000122585 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P01303 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 3.30 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
Entry History & Funding Information
Deposition Data
- Released Date: 2024-07-31 Deposition Author(s): Shen, S.Y., Zhao, C., Shao, Z.H.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Other government | China | -- |
Revision History (Full details and data files)
- Version 1.0: 2024-07-31
Type: Initial release - Version 1.1: 2024-10-16
Changes: Data collection, Structure summary
