fish community
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Black bullheads Ameiurus melas are an environmentally tolerant omnivorous fish species that are found throughout much of North America and parts of Europe. Despite their prevalence, black bullheads are an infrequently studied species making their biology, ecology, and life history poorly understood. Although limited information has been published on black bullheads, evidence suggests that bullheads can dominate the fish biomass and have profound influences on the fish community in some north temperate USA lakes. The goal of our study was to provide additional information on black bullhead population demographics, growth rates, life history characteristics, and seasonal diet preferences in a northern Wisconsin lake. Using common fish collection gears (fyke netting, electrofishing), fish aging protocols, fecundity assessments, and diet indices, our results suggested that black bullheads exhibited relatively fast growth rates, early ages at maturity, moderate fecundity, and a diverse omnivorous diet. Due to these demographic and life history characteristics, black bullheads have the potential to dominate fish community biomass in their native and introduced range. Results from our study may inform the management of black bullhead as native and invasive species.

Tamor River in eastern Nepal supports diverse hill stream fishes. From winter, spring, summer, and autumn of 2020, we investigated the ichthyofaunal diversity with environmental variables in the snow-fed Tamor River covering four seasons (winter, spring, summer, and autumn) and field surveys were carried out in January, April, July, and October 2020. We used two cast nets of different sizes, one with a mesh size of 2 cm, 6 m diameter and 6 kg weight and another having 0.5 cm, 3 m diameter and 2 kg weight. In addition, monofilament gill nets with mesh sizes of 6, 8, and 10 were used for fish sampling. A total of 6,373 fish individuals representing 28 species belonging to three orders, seven families, and 16 genera were recorded. One-way permutational multivariate analysis of variance (perMANOVA) on the Non-metric Multidimensional Scaling (NMDS) showed no significant (P >0.05) difference between winter, spring, and autumn season but summer season showed significant (P <0.05) difference from winter, spring, and autumn seasons. Furthermore, one-way analysis of variance on redundancy analysis (RDA) vindicated that among the selected parameters, pH, air temperature and total hardness were the influencing factors (P <0.05) to determine the fish community structure in Tamor River.

This study aims to determine fish's diversity, abundance, and dominance in Ulak Lia Lake, Sekayu District. This research was conducted at Lake Ulak Lia, Sekayu District, Musi Banyuasin Regency, from February to March 2021. The fish sampling method was performed by direct catching at three predetermined observation stations using nets. Netting was carried out for 12 hours, taking catches with traps that have been installed in the morning from 7 a.m. to 9 a.m., depending on conditions or weather. Sampling was marked using a bamboo buffer and the help of the Global Positioning System (GPS). The results showed that the Diversity Index ranged from 1.85 to 1.91 indicating low diversity. The fish abundance index ranged from 30.16 to 36.87 indicating low fish abundance. Where the Dominance Index 0.71-0.72 shows a moderate dominance index. Meanwhile, the dominant fish in Ulak Lia Lake is the Sapil fish (Helostoma temminckii).

Studies on fish community structure along altitudinal gradients of rivers are lacking in Nepal. This study was carried out to gauge the fish diversity and composition along elevational gradient in Ratuwa River. The altitudinal gradient varies between 70 m to 1300 m. Fish samples were collected based on habitat representativeness from April (spring) 10-18, July (summer) 10-18, October (autumn) 10-18, 2020 and January (winter) 10-18, 2021. A total of 3447 specimens representing 4 orders, 14 families and 36 species were identified. Both fish diversity and abundance of studied ichthyofauna vary with altitudinal gradient. The present study affirmed that fish species of Opsarius bendelisis, Schistura multifasciatus, Garra annandalei, Brachydanio rerio, Aspidoparia morar, and Schistura scaturigina are the major contributory species (>1%) for both space and time spectrums. Fish community structure testing for both to space and time showed significant difference in spatial spectrum (R=0.72, P<0.01) but no significant difference in temporal variation (R=-0.034, P>0.05). The present results hinted that fish assemblage structure varied significantly from low to high elevations, altitude, water temperature, water velocity, dissolved oxygen and pH was found as major influential factors (P<0.05) for species distribution.

Abstract Coral reef fish populations are declining due to multiple factors including habitat destruction, overfishing, and climate change. While these can include seasonal impact, seasonal changes can also be a confounding factor, so that seasonal monitoring is essential for detecting true temporal changes in fish community abundance and composition. However, seasonal monitoring is rarely implemented. The aim of this study was to detect the seasonal patterns of coral reef fish community structure around Tidung Kecil Island, Indonesia, using eDNA metabarcoding (eDNA) and underwater visual census (UVC). The UVC identified 32 species belonging to 10 families in the rainy season and 29 species belonging to 7 families in the dry seasons. The eDNA metabarcoding identified 209 species belonging to 56 families and 27 species belonging to 17 families in the rainy and dry seasons, respectively. Based on eDNA metabarcoding data, coral reef fish abundance and community composition differed significantly between seasons (Mann Whitney, p<0.01), while the UVC method did not detect these seasonal differences (Mann Whitney, p>0.05). UVC and eDNA data both showed a predominance of omnivorous fishes in the rainy season and carnivorous fishes in the dry season. Ecological indices did not differ significantly between seasons for either method, although the species making the highest contributions to the similarity (SIMPER) analysis differed between methods. Overall, this study confirms the premise that eDNA metabarcoding can be an effective tool for monitoring seasonal variation in coral reef fish communities.

AbstractNucleic acids released by organisms and isolated from environmental substrates are increasingly being used for molecular biomonitoring. While environmental DNA (eDNA) has received attention recently, the potential of environmental RNA as a biomonitoring tool remains less explored. Several recent studies using paired DNA and RNA metabarcoding of bulk samples suggest that RNA might better reflect “metabolically active” parts of the community. However, such studies mainly capture organismal eDNA and eRNA. For larger eukaryotes, isolation of extra-organismal RNA will be important, but viability needs to be examined in a field-based setting. In this study we evaluate (a) whether extra-organismal eRNA release from macroeukaryotes can be detected given its supposedly rapid degradation, and (b) if the same field collection methods for eDNA can be applied to eRNA. We collected eDNA and eRNA from water in lakes where fish community composition is well documented, enabling a comparison between the two nucleic acids in two different seasons with monitoring using conventional methods. We found that eRNA is released from macroeukaryotes and can be filtered from water and metabarcoded in a similar manner as eDNA to reliably provide species composition information. eRNA had a small but significantly greater true positive rate than eDNA, indicating that it correctly detects more species known to exist in the lakes. Given relatively small differences between the two molecules in describing fish community composition, we conclude that if eRNA provides significant advantages in terms of lability, it is a strong candidate to add to the suite of molecular monitoring tools.