˜

Cardiff University
Cardiff School of Computer Science

Prifysgol Caerdydd
Ysgol Cyfrifiadureg Caerdydd

Introductory Note 201

UNIX /Linux Shell Commands

Robert Evans

12th September, 2004

Copyright 2003,
c 2004 R.Evans.
Email: Robert.Evans@cs.cardiff.ac.uk

Abstract
The Shell is the command interpreter on UNIX and Linux systems. This Note in-
toduces some of the basic features of the Shell and lists many of the commands or
programs available on the UNIX and Linux computers in Cardiff School of Computer
Science.

Contents
1 The Shell 1

2 Command Summary 6
2.1 Logging out . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6
2.2 Files and Directories . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6
2.2.1 Commands for accessing floppy disks . . . . . . . . . . . . . . . 6
2.3 File Editors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6
2.4 Manipulating data . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6
2.5 Manipulating data (cont’d) . . . . . . . . . . . . . . . . . . . . . . . . . . 7
2.6 Compressed files . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
2.7 Information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
2.8 Status . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
2.9 Printing . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
2.10 Messages between Users . . . . . . . . . . . . . . . . . . . . . . . . . . 8
2.11 Networking . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
2.12 Programming . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
2.12.1 General . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
2 Computer Science: Introductory Note 201 (2004/05)

2.12.2 C . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
2.12.3 C++ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
2.12.4 JAVA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
2.12.5 FORTRAN . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
2.12.6 Prolog . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
2.12.7 Other Languages . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
2.13 Text Processing . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
2.13.1 General Commands . . . . . . . . . . . . . . . . . . . . . . . . . 9
2.13.2 Troff . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10
2.13.3 TeX . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10
2.14 Word Processing . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10
2.15 Database Management . . . . . . . . . . . . . . . . . . . . . . . . . . . 10

1 The Shell
The UNIX and Linux command interpreter or shell is the program users interact with
in a terminal emulation window. The terminal emulation window can be one in the
workstation’s Graphical User Interface - gnome-terminal on Linux or dtterm on
Solaris. Alternatively, it can be an application such as telnet, secure shell client or
PuTty on a Windows PC that’s logged into Linux or UNIX over the network.
The shell used in the School of Computer Science is bash - Bourne Again Shell.
There are other shells available such as the Bourne Shell, the C-Shell and the TC-
Shell, and you can choose to use a different shell if you prefer. They all have similar
characteristics but each has its own particular features. This Note assumes you are
using bash.
Bash has the following features:

• a command prompt which may be configured by the user. The default prompt is

bash-2.05$

- a dollar symbol preceded by “bash” and the bash program’s version number.

• the shell, like other programs on UNIX and Linux has an associated current di-
rectory. Programs running on UNIX and Linux use the current directory as the
starting point when locating files. The shell command

bash-2.05$ cd

is used to change the current directory to a different location in the UNIX or Linux
file system.

• commands are invoked by naming them. Most UNIX and Linux commands are
simply programs which are executed by the shell. For example,

bash-2.05$ ls

runs the program ls which reads the current directory and lists the names of its
files.

• When you type a command name, the shell will check to see if the command is
built-in and will otherwise search a set of directories until it finds the program.
This set is known as the search path.
Information for Users: Introductory Note 201 (2004/05) 3

The search path includes the current directory, your home directory and its sub-
directory “linuxbin” or “solarisbin” (depending on whether you are logged in to
Linux or Solaris). You can write your own programs and invoke them simply by
typing their names. If you store such a program in the directory “linuxbin” or
“solarisbin” as appropriate, it will be found and run no matter what your current
directory is.

• commands often have argument strings which may, for instance, represent file-
names. E.g.

bash-2.05b$ cd ˜/linuxbin

change the current directory to “linuxbin” in your home directory. (The tilde char-
acter ˜ means your home directory to the shell.
Some commands need more than one argument. E.g.

bash-2.05b$ cp fileA fileB

is the copy command cp with two filename arguments; “fileA” is copied to a new
file, “fileB”.
Some commands have flag or option argument strings usually beginning with “-”
or “–”. The flags modify the behaviour of the program being invoked:

bash-2.05b$ ls -lt

makes ls give a long listing of the files sorted by time of creation.

• the shell will expand wildcards to match filenames in the current directory. For
example,

bash-2.05b$ ls -l *.c

will give a directory listing of the files with names “anything.c” (conventionally C
program source files).

• most UNIX and Linux commands and programs adhere to a concept of standard
input and standard output. The standard input is a stream of data which the
program reads and the standard output is a stream of output written by the pro-
gram. Often these are both attached to the terminal so that input comes from
your keyboard and output goes to your screen. The shell lets you redirect the
standard input and output.
The symbol “<” is used to redirect standard input from a file and the symbol “>”
is used to redirect standard output to a file. For example:

bash-2.05b$ cat < fileA

makes cat reads from file “fileA”. It outputs the file’s contents to the terminal or
screen.

bash-2.05b$ cat < fileA > fileB

reads from “fileA” and writes to “fileB”.

• the Shell has the facility to pipe the output of one program to the input of another.
The pipe symbol is “|”. For example:

bash-2.05b$ ls | wc -w

pipes the output of ls (viz., your filenames) into the word count program wc.
The “-w” flag tells wc to count the number of words in its input. So the above
command counts the number of files in your directory.
4 Computer Science: Introductory Note 201 (2004/05)

• You may assign aliases for commands or groups of commands:

bash-2.05b$ alias xx=exit
sets up an alias “xx” to stand for the command exit.
• the shell has string and numeric valued variables.
bash-2.05b$ x="hello world"
bash-2.05b$ echo $x
prints “hello world” on the screen. Some variables are pre-set, e.g. $HOME is
your home directory. Type set to see a list of assigned variables.
• Bash is an interpretive programming language with while loops, for loops,
if-then-else statements, etc. See the UNIX or Linux on-line documentation
for more details. Type
bash-2.05b$ man bash
to view its manual page.
• scripts of shell commands can be written. These can be invoked in the same
way as compiled programs (i.e. just by naming them). For example:
bash-2.05b$ cat > ˜/linuxbin/countfiles
#!/bin/bash
ls | wc -w
ˆD
bash-2.05b$ chmod +x ˜/linuxbin/countfiles
creates a bash script file in your “linuxbin” directory. The chmod command
changes its protection mode to make it executable.
The first line of the script tells Linux that the script is written in the Bourne again
Shell language (UNIX and Linux scripts can be written in any application lan-
guage), while the second line tells the Shell to run the directory listing command,
ls, and pipe its output to the word count program, wc. Now
bash-2.05b$ countfiles
will execute the script and count and output the number of files in your directory,
• the shell has “job control”. Programs which don’t require any terminal interaction
can be run in the background.
bash-2.05b$ sort bigfile > sortedfile &
[1] 3470
bash-2.05b$
The “&” puts the sort program into the background and the shell is available
immediately for other commands. The shell prints the job control number (“1” in
this case) and the process identity number (“3470”).
The special character “ˆZ” (Control-Z) can be used to suspend a program which
is running in the foreground:
bash-2.05b$ sort bigfile > sortedfile
ˆZ
[1]+ Stopped sort bigfile >sortedfile
bash-2.05b$
You may now use command bg to put the program into the background or fg
to continue it in the foreground. If you have more than one job running in the
background or suspended, you can refer to them by their job number. So
Information for Users: Introductory Note 201 (2004/05) 5

fg %2
bring job number 2 into the foreground while

kill %1
terminates job number 1.
The command
bash-2.05b$ jobs

lists the status of all stopped or background jobs along with the job number
(1,2,3...).
If a backgound job needs terminal input, it will stop until you bring it into the
foreground.
• the shell has a history mechanism - it remembers the last few commands.

bash-2.05b$ history
lists the remembered commands along with a reference number, e.g:
515 cd .Intro
516 ls -ltd 302*
517 latex 302
518 latex 302
519 dvips -Ppdf -G0 -ta4 302
520 ps2pdf 302.ps
521 acoread 302.pdf
In a workstation’s terminal emulation windows, you can cut and paste from the
history to rerun a command. You can also use the symbol “!” to rerun any
command from the history:
bash-2.05b$ !518
reruns command number “518” from the history.
bash-2.05b$ !ps
reruns the last command starting “ps...”.
bash-2.05b$ !!

reruns the last command.

See the manual page on bash for more details (type man bash).
Bash has an additional mechanism which allows you to recall and edit previous com-
mands using the keyboard up-arrow key ↑ . If you press up-arrow, the last command
re-appears on the terminal. Press up-arrow again to get earlier commands. To rerun
the command, press RETURN . To amend the command before rerunning it, use the
delete key to remove characters from the end or use the back-arrow ← to reposition
the cursor to delete or insert characters within the command.
6 Computer Science: Introductory Note 201 (2004/05)

2 Command Summary 2.2.1 Commands for accessing floppy

disks
Here is a summary of some of the com-
mands available. For more details refer to The mtools commands are for accessing
the manual page in Section 1 of the UNIX MSDOS disks.
Reference Manual. You can see these on- mcopy - copy to/from floppy disk
line by using the man command. Just type mdir - list directory of floppy disk
man followed by the name of the command mcd - change MSDOS directory
you want to see. mdel - delete an MSDOS file

2.1 Logging out

2.3 File Editors
logout - log off UNIX

Note, on the Sun SPARCStations or Linux

Editors are used to create and amend files.
workstation you will need to exit the Desk-
top Environment instead, see Introductory emacs - GNU project Emacs
Notes 301 and 302. ex, edit - line editor
gedit - GNOME GUI text editor
nedit - easy-to-use GUI text edi-
tor
xemacs - emacs with mouse action
2.2 Files and Directories dtpad - Sun CDE text editor
pico - easy text editor for vdus
These commands allow you to create di- vi - standard text editor
rectories and handle files.
Vi, pico and emacs are screen-based
cat - concatenate and print
editors which run on a vdu or in a worksta-
data
tions terminal emulation window; dtpad,
cd - change current directory
gedit, nedit and xemacs are graphical
chgrp - change file group
user interface (GUI) -based editors with
chmod - change file mode
cut and paste, mouse-controlled cursor po-
cp - copy file data
sitioning etc.
file - determine file type
find - find files
grep - search file for regular ex-
pression
head - give first few lines
just - text justification program 2.4 Manipulating data
lpq - spool queue examination
program
lpr - spool file for line printing The contents of files can be compared and
lprm, - remove jobs from line altered with the following commands.
cancel printer queue awk - pattern scanning and pro-
ls - list and generate statistics cessing language
for files cmp - compare the contents of
mkdir - make a new directory two files
more, - display file data at your comm - compare sorted data
page terminal cut - cut out selected fields of
mv - move or rename files each line of a file
pwd - print working directory diff - differential file comparator
rm, - remove (unlink) files or di- expand, - expand tabs to spaces,
rmdir rectories unex- and vice versa
tail - print last lines from file pand
touch - update access and modi- gawk - pattern scanning and pro-
fication times of a file cessing language
Information for Users: Introductory Note 201 (2004/05) 7

2.5 Manipulating data (cont’d) 2.8 Status

join - join files on some com- These commands list or alter information
mon field about the system.
look - find lines in sorted data chfn - change your finger entry
perl - data manipulation lan- date - print the date
guage determin - automatically find termi-
paste - merge file data nal type
sed - stream text editor du - print amount of disk us-
sort - sort file data age
split - split file into smaller files finger - print information about
tr - translate characters logged-in users
uniq - report repeated lines in a groups - show group memberships
file homequota- show quota and file usage
wc - count words, lines, and iostat - report I/O statistics
characters kill - send a signal to a process
last - show last logins of users
lun - list user names or login ID
netstat - show network status
2.6 Compressed files passwd - change your login pass-
word
printenv - display value of a shell
Files may be compressed to save space. variable
Compressed files can be created and ex- ps - print process status
amined. statistics
compress - compress files quota -v - display disk usage and
uncompress - uncompress files limits
zcat - cat a compressed file reset - reset terminal mode
zcmp, - compare compressed script - keep script of terminal
zdiff files session
zmore - file perusal filter for crt stty - set terminal options
viewing of compressed text time - time a command
gzip - GNU alternative com- tset - set terminal mode
pression method tty - print current terminal
gunzip - uncompress gzipped files name
uptime - display system status
users - print names of logged in
users
2.7 Information vmstat - report virtual memory
statistics
Manuals and documentation are available w - show what logged in
on-line. Go to our web site www.cs.cf.ac.uk/systems users are doing
for web-based documentation. The fol- who - list logged in users
lowing Shell commands give information.
answerbook2 - invoke netscape to
view for Sun documen-
tation
apropos - locate commands by
keyword lookup
dthelpview - Sun CDE Worksta-
tion help viewer
man - displays manual
pages online
info - displays command in-
formation pages online
yelp - GNOME help viewer
8 Computer Science: Introductory Note 201 (2004/05)

2.9 Printing 2.11 Networking

The School of Computer Science is con-
Files can be printed using shell commands, nected to the JANET Internet Protocol Ser-
using the GUI print manager, or direct from vice (JIPS), the UK Universities’ network.
some applications.
These commands are used to send and
You must specify a printer by name. Print- receive files from Campus UNIX hosts and
ers are called from other hosts on JIPS and the Internet
tl3 lw Teaching Lab 3 (C/2.08) around the world.
laser printer ftp - file transfer program
tl2 lw Teaching Lab 2 (C/2.05) rcp - remote file copy
laser printer rlogin - remote login to a UNIX
tl1 lw Teaching Lab 1 (C/2.04) host
laser printer rsh - remote shell
Most commands which can be used to print tftp - trivial file transfer program
files, expect the printer name to be given telnet - make terminal connection
following a -P argument. to another host
Files may be sent to the printers as sim- ssh - secure shell terminal or
ple text files or they may be processed in command connection
various ways for the laser printers. scp - secure shell remote file
copy
lpr -Pprinter - send a file to a sftp - secure shell file transfer
printer program
a2ps -Pprinter - format text file in netscape - web browser
PostScript and print
on laser printer (Some of these commands may be restricted
dvips -Pprinter postprocess TeX for security reasons).
file into Postscript
and print on laser
printer

2.10 Messages between Users

The UNIX systems support on-screen mes-

sages to other users and world-wide elec-
tronic mail.
pine - vdu-based mail utility
elm - alternative vdu-based
mail utility
frm, - identifies sender of mail
from
mail - simple send or read mail
program
dtmail - CDE mail handling tool on
SPARCStations
evolution - GUI mail handling tool on
Linux
mesg - permit or deny messages
parcel - send files to another user
talk - talk to another user
write - write message to another
user
Information for Users: Introductory Note 201 (2004/05) 9

2.12 Programming 2.12.5 FORTRAN

The following programming tools and lan- f77 - Fortran 77 compiler

guages are available. f90 - Fortran 90 compiler
f95 - Fortran 95 compiler
fsplit - split a multi-routine For-
tran file
2.12.1 General workshop - SPARCStation develop-
ment environment
dbx - Sun debugger
workshop - integrated program de-
velopment environment on
SPARCStations 2.12.6 Prolog
make - maintain program groups
nm - print program’s name list sicstus - Sicstus Prolog
size - print program’s sizes
strip - remove symbol table and
relocation bits
2.12.7 Other Languages

(Not available on all systems).

2.12.2 C
bc - interactive arithmetic lan-
guage processor
cb - C program beautifier
gcl - GNU Common Lisp
cc - ANSI C compiler for Suns
squeak - smalltalk
SPARC systems
mathematica
- symbolic maths package
ctrace - C program debugger
matlab - maths package
cxref - generate C program
perl - general purpose lan-
cross reference
guage
workshop - SPARCStation develop-
php - web page embedded lan-
ment environment
guage
gcc GNU ANSI C Compiler
asp - web page embedded lan-
indent - indent and format C pro-
guage
gram source

2.12.3 C++ 2.13 Text Processing

CC - C++ compiler for Suns Troff is the standard UNIX text format-
SPARC systems ter. TeX is also available for documents
workshop - SPARCStation develop- intended for a LaserPrinter.
ment environment
g++ GNU C++ Compiler

2.13.1 General Commands

2.12.4 JAVA fmt - simple text formatter

spell - check text for spelling er-
javac - JAVA compiler ror
appletviewer
- JAVA applet viewer ispell - check text for spelling er-
netbeans - Java integrated develop- ror
ment environment on Linux gv, ggv - gnu PostScript previewer
runide - Java integrated devel- for workstations
opment environment on sdtimage - PostScript previewer for
SPARCStations SPARCStations
10 Computer Science: Introductory Note 201 (2004/05)

2.13.2 Troff

eqn - mathematical preproces-

sor for troff
grap - pic preprocessor for draw-
ing graphs
nroff - text formatting language
pic - troff preprocessor for
drawing pictures
tbl - prepare tables for nroff or
troff
troff - text formatting and type-
setting language
groff - GNU troff interface for
laserprinting
groff can be used to invoke all the pre-
processors as necessary.

2.13.3 TeX

dvips - convert a DVI file to

POSTSCRIPT
tex - text formatting and type-
setting
latex - latex formatter
xdvi - dvi previewer for DECSta-
tions and SPARCStations

2.14 Word Processing

StarOffice on Suns and Openoffice.org is
available on the Suns and Linux repec-
tively. These are Office packages which
attempt compatibilty with MS Office.

2.15 Database Management

Mysql, Oracle and informix are available.
setoracle - set up oracle environment
and path on Suns
sqlplus - run the Oracle SQL inter-
preter
sqlldr - run the Oracle SQL data
loader
oemapp - run the Oracle worksheet
work- interface
sheet
mysql - run the mysql SQL inter-
preter
Other database systems are available for
research use. See your supervisor for in-
formation.