Microbiology An Introduction 12th Edition Tortora Solutions Manual 1
Microbiology An Introduction 12th Edition Tortora Solutions Manual 1
Microbiology An Introduction 12th Edition Tortora Solutions Manual 1
CHAPTER
Microbial Metabolism
5
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Chapter Summary
Catabolic and Anabolic Reactions (pp. 110–111)
ASM 3.1: Bacteria and Archaea exhibit extensive, and often unique,
metabolic diversity (e.g. nitrogen fixation, methane production, anox-
ygenic photosynthesis).
ASM 3.3: The survival and growth of any microorganism in a given en-
vironment depend on its metabolic characteristics.
1. The sum of all chemical reactions within a living organism is known as metabolism.
2. Catabolism refers to chemical reactions that result in the breakdown of more complex
organic molecules into simpler substances. Catabolic reactions usually release energy.
3. Anabolism refers to chemical reactions in which simpler substances are combined to
form more complex molecules. Anabolic reactions usually require energy.
4. The energy of catabolic reactions is used to drive anabolic reactions.
5. The energy for chemical reactions is stored in ATP.
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ASM 3.2: The interactions of microorganisms among themselves and
with their environment are determined by their metabolic abilities (e.g.,
quorum sensing, oxygen consumption, nitrogen transformations).
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10. At high temperatures, enzymes undergo denaturation and lose their catalytic properties;
at low temperatures, the reaction rate decreases.
11. The pH at which enzymatic activity is maximal is known as the optimum pH.
12. Enzymatic activity increases as substrate concentration increases until the enzymes are
saturated.
13. Competitive inhibitors compete with the normal substrate for the active site of the
enzyme. Noncompetitive inhibitors act on other parts of the apoenzyme or on the
cofactor and decrease the enzyme’s ability to combine with the normal substrate.
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10. A series of enzymatically catalyzed chemical reactions called metabolic pathways store
energy in and release energy from organic molecules.
ASM 3.1: Bacteria and Archaea exhibit extensive, and often unique,
metabolic diversity (e.g., nitrogen fixation, methane production, anox-
ygenic photosynthesis).
5. The pentose phosphate pathway is used to metabolize five-carbon sugars; one ATP and
12 NADPH molecules are produced from one glucose molecule.
6. The Entner-Doudoroff pathway yields one ATP and two NADPH molecules from one
glucose molecule.
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18. In eukaryotes, electron carriers are located in the inner mitochondrial membrane; in
prokaryotes, electron carriers are in the plasma membrane.
19. In aerobic prokaryotes, 38 ATP molecules can be produced from complete oxidation of a
glucose molecule in glycolysis, the Krebs cycle, and the electron transport chain.
20. In eukaryotes, 36 ATP molecules are produced from complete oxidation of a glucose
molecule.
21. The total ATP yield is less than in aerobic respiration because only part of the Krebs
cycle operates under anaerobic conditions.
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The Light-Dependent Reactions: Photophosphorylation (pp. 134–135)
2. Chlorophyll a is used by green plants, algae, and cyanobacteria; it is found in thylakoid
membranes.
3. Electrons from chlorophyll pass through an electron transport chain, from which ATP is
produced by chemiosmosis.
4. Photosystems are made up of chlorophyll and other pigments packed into thylakoid
membranes.
5. In cyclic photophosphorylation, the electrons return to the chlorophyll.
6. In noncyclic photophosphorylation, the electrons are used to reduce NADP+. The elec-
trons from H2O or H2S replace those lost from chlorophyll.
7. When H2O is oxidized by green plants, algae, and cyanobacteria, O2 is produced; when
H2S is oxidized by the sulfur bacteria, S0 granules are produced.
ASM 3.1: Bacteria and Archaea exhibit extensive, and often unique,
metabolic diversity (e.g., nitrogen fixation, methane production, anox-
ygenic photosynthesis).
1. Photoautotrophs obtain energy by photophosphorylation and fix carbon from CO2 via the
Calvin-Benson cycle to synthesize organic compounds.
2. Cyanobacteria are oxygenic phototrophs. Green bacteria and purple bacteria are
anoxygenic phototrophs.
3. Photoheterotrophs use light as an energy source and an organic compound for their
carbon source and electron donor.
4. Chemoautotrophs use inorganic compounds as their energy source and carbon dioxide as
their carbon source.
5. Chemoheterotrophs use complex organic molecules as their carbon and energy sources.
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2. UDPNAc is the starting material for the biosynthesis of peptidoglycan.
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Lipid Biosynthesis (p. 141)
3. Lipids are synthesized from fatty acids and glycerol.
4. Glycerol is derived from dihydroxyacetone phosphate, and fatty acids are built from
acetyl CoA.
The Loop
Complete metabolic pathways are provided in Appendix A. The boxes in Chapter 1, Chapter
2, Chapter 11, Chapter 27, and Chapter 28 illustrate applications of microbial metabolism in
bioremediation and industry. Chapters 27 and 28 can be included with the study of Chapter 5
to provide students with applications of metabolism.
Answers
Figure Questions
Figure Question Answer
5.1 How does ATP provide the energy for Hydrolysis of ATP produces energy that
synthesis? can be used in another chemical reaction.
5.2 Why does a chemical reaction require Energy is needed to disrupt the stable
increased activation energy without an electronic configuration of the reactants.
enzyme as a biological catalyst?
5.3 How does the enzyme–substrate Changes the configuration of the reactants,
complex lower the activation energy of increasing collisions
the reaction?
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5.4 Give an example of enzymatic The polymers of glucose (e.g., starch,
specificity. cellulose, dextran) have different bonding
between the glucose monomers, which can
only be hydrolyzed by a specific enzyme
(e.g., amylase, cellulase, dextranase).
5.5 How will this enzyme act at 25°C? It will act at 25°C and 45°C, but below its
At 45°C? At pH 7? optimum rate. It will be slower at 45°C
than at 25°C. It will act at its optimum rate
at pH 7.
5.6 When is denaturation irreversible? It is irreversible if the enzyme has lost its
solubility and coagulates.
5.7 How do competitive inhibitors operate Competitive inhibitors bind to the active
in comparison to noncompetitive site so more substrate is needed for the
inhibitors? reaction to occur. Noncompetitive
inhibitors bind to another site altering the
shape of the active site and the reaction
cannot occur.
5.8 Explain the differences between Competitive inhibition (see Fig. 5.7) is
competitive inhibition and feedback usually from an environmental chemical.
inhibition. Feedback inhibition is usually
noncompetitive inhibition (see Fig. 5.7).
5.9 How do oxidation and reduction differ? Oxidation is loss of electrons; reduction is
gaining electrons.
5.10 How do organisms use Oxidation reactions provide energy for
oxidation-reduction reactions? the cell; reduction reactions are needed to
accept the electrons from oxidation.
5.12 What is glycolysis? Oxidation of glucose to pyruvic acid
5.13 What are the products of the Krebs CO2, NADH + H+, and FADH2
cycle?
5.14 What are the functions of the electron To generate a proton motive force that
transport chain? can drive ATP synthase; reoxidize NADH
produced in glycolysis and the Krebs
cycle.
5.15 What is the proton motive force? Energy from the transfer of protons across
a membrane
5.16 Where does chemiosmosis occur in Inner mitochondrial membrane in
eukaryotes? In prokaryotes? eukaryotes; plasma membrane in
prokaryotes
5.17 How do aerobic and anaerobic The final electron acceptors are different.
respiration differ? The final electron acceptor in aerobic
respiration is O2.
5.18 During which phase of fermentation is During glycolysis
ATP generated?
Review
1. (a) is the Calvin-Benson cycle, (b) is glycolysis, and (c) is the Krebs cycle.
a. Glycerol is catabolized by pathway (b) as dihydroxyacetone phosphate; fatty acids by
pathway (c) as acetyl groups.
b. In pathway (c) at α-ketoglutaric acid
c. Glyceraldehyde-3-phosphate from the Calvin-Benson cycle enters glycolysis. Pyruvic
acid from glycolysis is decarboxylated to produce acetyl for the Krebs cycle.
d. In (a), between glucose and glyceraldehyde-3-phosphate
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e. The conversion of pyruvic acid to acetyl, isocitric acid to α-ketoglutaric acid, and
α-ketoglutaric acid to succinyl CoA
f. By pathway (c) as acetyl groups
g. Uses Produces
Calvin-Benson cycle 6 NADPH
Glycolysis 2 NADH
Pyruvic acid → acetyl 1 NADH
Isocitric acid → α-ketoglutaric acid 1 NADH
α-ketoglutaric acid → succinyl CoA 1 NADH
Succinic acid → fumaric acid 1 FADH2
Malic acid → oxaloacetic acid 1 NADH
h. Dihydroxyacetone phosphate; acetyl; oxaloacetic acid; α-ketoglutaric acid
2.
3.
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c. In cyclic photophosphorylation, electrons are returned to chlorophyll. In noncyclic
photophosphorylation, chlorophyll receives electrons from hydrogen atoms.
5. a. Photophosphorylation
b. Oxidative phosphorylation
c. Substrate-level phosphorylation
6. Oxidation
7. a. CO2 d. Light g. Organic molecules
b. Light e. CO2 h. Organic molecules
c. Organic molecules f. Inorganic molecules
8. Protons are pumped from one side of the membrane to the others; transfer of protons
back across the membrane generates ATP. (a) Outer portion is acidic and (b) has a posi-
tive electrical charge. (c) Energy-conserving sites are the three loci where protons are
pumped out. (d) Kinetic energy is realized at ATP synthase.
9. NAD+ is needed to pick up more electrons. NADH is usually reoxidized in respiration.
NADH can be reoxidized in fermentation.
10. Chemoautotroph
Multiple Choice
1. a 6. b
2. d 7. b
3. b 8. a
4. c 9. c
5. c 10. b
Analysis
1. Streptococcus is only capable of fermentation, which yields two molecules of ATP for
each molecule of glucose consumed. Most of the energy that cells obtain from catabolism
is from respiration.
2. The rate at which an enzyme converts substrate to product is partly a function of initial
concentration of substrate. The more substrate molecules available, the more frequently
they access the active site of the enzyme. The reaction proceeds at a linear rate (black).
When the concentration of substrate is high enough that all enzyme molecules have their
active sites engaged, the reaction rate will remain constant. More substrate is needed
when a competitive inhibitor is present. When the enzyme becomes saturated with
competitive inhibitor, the reaction will completely stop (red).
3. Carbohydrate catabolism:
a. Oxidation of glucose (glycolysis, Krebs, aerobic ETC)
b. Following the Calvin-Benson cycle: oxidation of glucose (glycolysis, Krebs, aerobic
ETC)
c. Following the Calvin-Benson cycle: oxidation of glucose (glycolysis, Krebs, anaerobic
ETC)
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Energy production: All three use chemiosmotic mechanisms. In addition to oxidative
phosphorylation, Spirulina and Ectothiorhodospira use photophosphorylation.
4. Glucose = 38 ATP
Triglyceride = 233 ATP. Glycerol is converted to PGAL and metabolized in glycolysis to
produce 2 ATP and 1 NADH. Six acetyl groups are produced from each of the 12-carbon
chains by beta-oxidation. Each acetyl enters the Krebs cycle to yield 1 ATP, 3 NADH,
and 1 FADH.
5. Two electrons removed from As3+ are picked up by NAD+ for use in the electron trans-
port chain. Thiobacillus could be used to remove arsenic from industrial wastewater and
groundwater.
Background
In 1861, Louis Pasteur observed that when yeasts grow in a sugar-and-protein medium com-
pletely free of air, they ferment vigorously, and for every gram of yeast that forms, 60 to 80
grams of sugar disappear. If the experiment is carried out in the presence of air, for 1 gram of
yeast that forms, only 4 to 10 grams of sugar are removed. The yeasts again ferment if trans-
ferred to a sugar-containing medium absent air.
When the experiment is repeated with a protein medium, the yeasts grow only in the
presence of oxygen. Pasteur concluded that the yeasts can take oxygen from air, and in the
absence of air, the yeasts take oxygen from the sugar.
Pasteur applied quantitative methods to his studies of fermentation and was the first to
report on organisms that could live and reproduce in the absence of oxygen. His conclusion
was, however, incorrect. These different behaviors of yeasts are known today as the “Pasteur
effect.”
Questions
1. Explain the three yeast behaviors based on modern concepts of microbial metabolism.
2. What was incorrect about Pasteur’s conclusion?
The Solution
1. The yeasts are able to grow anaerobically if a fermentable sugar is available. Fermenta-
tion consumes more sugar than respiration to produce the same amount of energy.
2. Pasteur assumed yeasts were taking oxygen from the sugar.
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