Ip 613-14
Ip 613-14
Ip 613-14
613.1
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AEROBIC MICROBIAL CONTENT OF FUELS AND WATER - THIXOTROPIC GEL CULTURE, IP 613
613.2
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AEROBIC MICROBIAL CONTENT OF FUELS AND WATER - THIXOTROPIC GEL CULTURE, IP 613
6.8 Container, sterile, transparent, and fuel in volume are taken to enable easier visual observation
compatible – capacity 10 ml to 150 ml (optional). of the sample for water, dirt, particulates and suspected
microbial growth. However, less than 1 ml of sample is
actually required for the test.
7 Sampling and sample handling
7.3 If fuel phase is to be tested (see 9.3), the
7.1 Samples shall be taken and handled container to which sample is transferred shall be
in accordance with the Guidelines for the filled sufficiently to enable the measuring devices
Investigation of the microbial content of petroleum to be inserted to a depth of approximately 3 cm
fuels and for the implementation of avoidance and below the surface of the fuel. If water phase is
remediation strategies. also to be tested (see 9.6), the container to which
sample is transferred shall enable ready access to
NOTE The numbers of viable microorganisms in a settled water in the bottom of the sample. The
fuel sample will be highly dependent on the sampling container shall be sterile and must be compatible
location and also whether free water is present in the
with the fuel sample.
sample; test results should be interpreted accordingly.
Usually, most microbial contamination will be present
in a tank bottom or system low point, particularly at 7.4 Once fuel samples have been taken, any
any fuel water interface and in free water settled or microorganisms present will usually slowly die
suspended in the fuel. For routine monitoring, testing and it is important to test samples as soon as
low point (e.g. dead bottom or drain) samples is possible, ideally within 48 hours. Samples will
advisable as these will provide the earliest and most give increasingly less reliable results as they get
consistent indication of tank or system contamination. older.
Testing representative fuel samples (e.g. upper, middle,
and lower layer samples) can provide some indication
of the extent of contamination in bulk fuel but results 8 Apparatus preparation
will be applicable only to the specific sample at the
time of sampling; microbial contamination in bulk
8.1 If the bottles of gel culture medium have
fuel is generally unevenly distributed and levels of
contamination detected at the same sampling location
been stored refrigerated, allow them to equilibrate
will vary with time. Contamination levels in bulk fuel to ambient temperature before they are used.
in storage tanks will generally decrease with product Remove the cap seal from the neck of the bottle.
settling and increase if tank bottoms are disturbed. Avoid prolonged exposure of the culture medium
to direct sunlight or other bright light at all times.
7.2 Sampling equipment and sampling valves
shall be clean and decontaminated by rinsing 8.2 If glass pipettes or pipette tips are to be
or wiping with a 70 % alcohol solution (5.2). used for taking the test portion from the sample
Ensure alcohol evaporates before taking samples; sterilise by autoclaving at 121 ºC ± 2 ºC for
residues of alcohol may interfere with the test and 15 min or by placing in an oven at 170 ºC ± 2 ºC
cause false negative results. Alternatively, use for 1 h. The specified sterilisation time does not
commercially available alcohol wipes. Particular include additional time which may be required to
attention shall be paid to the cleanliness of allow for containers to equilibrate to the specified
sampling points as these can harbour dirt and temperature. If they are autoclaved, ensure they
microbial contamination and cause false positive are dry before use.
test results.
8.3 If an incubator (6.6) is to be used ensure
NOTE 1 Wherever possible sterile sampling containers it is operating at 25 °C ± 3 °C.
should be used but if unavailable, it is sufficient to use
clean, previously unused containers.
9 Procedure
Rinse sampling equipment such as bottom
NOTE 1 Because free water phase may not always be
samplers, bacon bombs and all level samplers and recovered in samples, for consistency when conducting
containers with fuel from the tank or system to be routine microbiological monitoring it is recommended
sampled before taking the sample for test. When that the fuel phase from above any free water phase
sampling from drain lines, take the sample as present is always tested. In some circumstances, for
soon as the contents of the drain line have been example when investigating contamination sources
flushed away, sampling the first product/water to or assessing the extent of microbial growth in a tank
come from the tank or filter vessel. or system, it may be also informative to assess the
microbial content in any free water present in the
sample. Presence of discoloured water (brown or
NOTE 2 It is recommended that samples of about 1 litre
black), a lacy interface between the fuel and water
613.3
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AEROBIC MICROBIAL CONTENT OF FUELS AND WATER - THIXOTROPIC GEL CULTURE, IP 613
layers or soft, organic debris in the fuel or water layer Place the cap on a clean surface.
are all indications of likely microbiological activity.
Water phase will usually contain substantially higher
9.3.3 Using a syringe (6.2) or an alternative
numbers of microbial cfu than fuel phase and a different
interpretation of results is required. measuring device (6.4), draw fuel from
approximately 3 cm below the surface of the fuel
phase of the sample. If there is less than 6 cm
NOTE 2 Although accuracy and minimum detection
levels can be improved by conducting replicate tests, depth of fuel, draw sample from approximately
the procedure described is designed for both field and halfway down the fuel phase. The transfer of
laboratory use and, in the field, any increase in accuracy visible interfacial particulate, water droplets
obtained by replication will usually be sacrificed for or emulsion in the aliquot to be tested shall be
operational expediency. avoided.
NOTE 3 If microorganisms other than those in the If using the syringe (6.2), open the sterile syringe
sample are introduced into the culture medium they pack at the handle end and remove the syringe
may give rise to spurious colonies. To avoid this, the taking care not to touch the lower barrel and
test should be conducted in as clean an environment as
nozzle. Draw fuel into the syringe until it is more
practicable and care should be taken to avoid touching
surfaces of dispensing apparatus, pipettes and sample than half full and then, with the syringe nozzle
containers which come into direct contact with the uppermost, expel air. Expel fuel surplus to the
sample or culture medium. volume needed for the test (see below).
9.1 Visually inspect the sample to identify if If using the loop dispenser (6.3), for testing heavy
water is present by holding the sample up to the and residual fuels only, open the peel pack at the
light and examine it for haze or lack of clarity. handle end and remove the dispenser taking care
Then swirl the sample to produce a vortex and not to touch the loop and lower part of the shaft.
examine both the bottom of the vortex and the
bottom of the sample container for water droplets Aviation kerosene fuels
and particulate matter. Record the visual clarity The volume to test is 0,5 ml. Dispense this volume
as clear and bright or not clear and bright. Record directly into the gel culture medium bottle.
whether water droplets or particulate matter
were, or were not, observed on swirling. Other middle distillate fuels and gasoline
The volume to test is 0,25 ml. Dispense this
9.2 If the sample is not in a container suitable volume directly into the gel culture medium bottle.
for visual inspection or does not enable use of the
measuring devices to remove an aliquot for test Heavy and residual fuels
in accordance with 9.3 for a fuel phase test or The volume to test is 0,01 ml. Use the syringe
9.6 for a water phase test, the sample shall be (6.2) to dispense a drop of fuel onto the loop
transferred to a suitable, sterile container. dispenser (6.3). Allow surplus fuel to drain away
but ensure that the circle of the loop is filled, and
NOTE 1 Borosilicate glass has been found to be suitable then stab it into the gel culture medium in the
bottle and agitate briefly to transfer the sample
NOTE 2 Containers can be sterilised as described in into the gel. Alternatively, use a pipette (6.5) to
clause 8.2. Alternatively, suitable disposable, sterile dispense 0,01 ml fuel directly into the gel culture
containers are commercially available. Some incorporate medium bottle.
a mechanism for separation of fuel and water phases.
NOTE 1 The volume of sample tested can be changed
9.3 Testing the fuel phase of samples in order to increase or decrease the detection level of
the test. However, the performance of the test has not
9.3.1 Immediately prior to analysis, shake the been validated for testing fuel volumes greater than
sample vigorously by hand for approximately those stated above and ideally these should not be
exceeded.
30 s and then allow to stand for 12 min ± 1 min.
If depth of the fuel phase in the sample is less
than 6 cm then allow a settling time of 2 min per The syringe and loop dispenser and other
cm. disposable measuring devices shall be used
only once and discarded after use. If re-useable
measuring devices are used, they shall be freshly
9.3.2 Immediately before dispensing fuel sample
cleaned and re-sterilised between each use.
remove the cap of a gel culture medium bottle; do
not touch the inside of the cap or bottle neck.
613.4
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AEROBIC MICROBIAL CONTENT OF FUELS AND WATER - THIXOTROPIC GEL CULTURE, IP 613
9.3.4 Once the fuel has been dispensed into the temperature within the specified range. Occasional
gel culture medium bottle, replace and tighten the temperature fluctuations (e.g. overnight) below the
cap and proceed in accordance with 9.4. specified temperature range should not affect the
number of colonies which develop and will not critically
affect the test result, but microbial colonies may
NOTE 2 The prescribed settling time will typically take longer to become visible and thus an extension
enable any suspended free water to settle out from of the specified incubation time should be applied.
the top 6 cm of sample. In some cases, for example If temperature falls below the specified range during
where fuels are wet and visibly hazy, water phase may incubation, the incubation time should be extended by
not separate readily from the fuel phase and higher a time equivalent to the total time the temperature is
microbiological counts can be expected. Depending on estimated to have fallen below the specified range. If
the test objectives, an additional settling time may be the incubation temperature falls below the specified
applied to the sample prior to testing. However, the range for a period or periods totalling 4 days or more,
sample should always be tested as soon as possible microbial contamination will be underestimated and the
and within 48 h of the sample being drawn. result should be considered invalid. The temperature
of the culture medium should not be allowed to drop
9.4 Dispersing the test portion in the gel below 4°C.
culture medium
Incubation of the culture medium above the specified
9.4.1 Loosen and break up the gel culture temperature range may prejudice the ability to detect
medium in the bottle containing the dispensed some types of microorganism. However, where
microbial contamination occurs in tanks or systems
test portion by tapping the bottle firmly on the
where the contents have a higher temperature than
palm of the hand or on a large rubber bung or 25 °C, the contaminating microorganisms will often
thick rubber mat. Taking care not to break the have a preference for growth at higher temperatures, in
glass bottle. such cases it may be considered valid to incubate the
test at the temperature of the system sampled.
9.4.2 Shake the bottle vigorously for
approximately 30 s to liquefy the gel and disperse 9.5.2 If possible examine the culture medium
the test portion. daily during the incubation period. As a minimum,
examine it on at least one occasion in the first
NOTE 1 After shaking the gel it should be slightly 3 days of incubation and again on a final day of
viscous but free of lumps and have uniform clarity. The incubation. During each observation count visible
presence of air bubbles in the gel will not affect the red or purple colonies as they develop. Once a
test. colony is counted do not count it again even if
it grows larger; it is the number of colonies that
9.4.3 Flick the bottle so that the gel collects in are required, irrespective of their size. Avoid
the bottom of the bottle. Proceed immediately to agitating or shaking the bottle during incubation
9.4.4 before the gel resets. and examination.
9.4.4 Tap the bottle in the palm of the hand NOTE 2 It is recommended colonies are marked with
until the gel forms a flat layer on one of the larger a permanent marker pen (6.7) on the glass of the gel
flat bottle sides. Ensure a uniform layer of gel culture medium bottle to ensure that they are not
reaching all corners of the bottle is obtained. counted twice.
9.5 Incubating and examining the gel culture It is usually possible to count up to about 250
medium colonies. If the number of colonies is greater than
100, although a reasonable colony count can
usually be obtained, the colony count will exceed
9.5.1 Transfer the gel culture medium bottle to a
the range currently defined for quantitative
warm, dark location or incubator (6.6) to nominally
assessment of microbial content and consequently
maintain a temperature of 25 °C ± 3 °C, see
accuracy and precision may be low. If colonies
Note 1. Keep the gel on the lowest surface of the
cannot be counted, estimate the approximate
bottle. The gel will set firm after a few hours. It
colony count as per clause 9.5.3.
is important not to tilt the bottle or disturb the
gel during this time. In normal circumstances the
culture medium test shall be incubated for 4 days. 9.5.3 If the number of colonies is too numerous
to count, visually compare the test to the chart
NOTE 1 When conducting the test in the field it provided in Annex A, holding the test bottle
will not always be possible to maintain incubation against a white background.
613.5
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AEROBIC MICROBIAL CONTENT OF FUELS AND WATER - THIXOTROPIC GEL CULTURE, IP 613
NOTE 3 The chart provides an estimated colony count are still small (e.g. after 1 or 2 days incubation) they
to the nearest factor of ten. The result can only be are more easily counted. The centre of each streak or
considered semi-quantitative as the number of colonies patch should be counted as a single colony. Continue
present exceeds the range considered acceptable for incubation and count any new colonies which develop.
fully quantitative assessment of microbial content.
SAFETY When examining the culture medium do
If samples have a very high viable microbial content, not open the bottles. Wash hands after handling the
individual colonies will not be distinguishable and bottles. Once the final examination of the culture
the whole gel becomes red or purple (see picture medium has been conducted the test bottle shall
in the chart in Annex A showing a test with be decontaminated by adding two disinfectant
≥10 000 colonies). In such cases the microbial pills to the test bottle and shaking vigorously for
content is equal to or exceeds the maximum 30 s or by immersing the open bottle and cap in a
detection level of the test. strong disinfectant solution. The bottle shall then
be left for 24 h before discarding in accordance
NOTE 4 Points to be considered when examining culture with local regulations.
medium for colonies:
9.6 Testing water phase of samples (optional)
Colonies are usually circular but may have irregular
edges. Different types of microorganisms can grow
at different rates in the gel culture medium and
9.6.1 If an assessment of microbial content of
therefore the colonies may be of different sizes. At free water phase is required, after completion of
the recommended incubation temperature, colonies of fuel phase analysis as described in 9.3 to 9.4,
bacteria and yeasts usually develop within 1 to 2 days allow the sample to stand until water phase has
and remain quite small. Moulds colonies develop more settled to the bottom of the sample. Use the
slowly but eventually produce large colonies which may syringe (6.2) or pipette (6.4) to remove water
have a powdery or ‘fuzzy’ appearance. Generally, the from the bottom of the sample and transfer to
more colonies there are in the test bottle, the smaller a separate small, sterile container (6.8). Avoid
the colonies will be. Colonies will tend to become visible
transferring any of the fuel with the water.
more quickly in samples with a higher viable microbial
content.
NOTE 1 To enable ready access to water phase, it may
be necessary to first decant off some fuel phase from
All red or purple colonies in all parts of the test bottle
the sample.
should be counted, including any which are in gel which
is not part of the flat layer formed as described in 9.4.4.
9.6.2 Once water has been removed from any
It can be useful to photograph tests at each time of fuel, invert the container containing the water
examination for subsequent reference when determining three times to homogenise the water prior to
final colony counts. sampling. Immediately before dispensing the
water sample remove the cap of a gel culture
Occasionally, some antioxidant additives in fuels may medium bottle, do not touch the inside of the cap
interfere with the growth indicating compound in the or bottle neck. Place the cap on a clean surface.
gel culture medium and produce a uniform light peach
or orange colour in the gel (usually within 12 h). This 9.6.3 As appropriate for the volume of water
colour change will not interfere with the growth of any
to be tested (see Note below), use the loop
microorganisms and in most cases microbial colonies
can be counted or estimated ignoring the background
dispenser (6.3), syringe (6.2) or pipette (6.4 or
colour. In exceptional cases the interference may be 6.5) to measure the required volume of water to
so strong that users may find it difficult to distinguish test.
colour interference from an estimated count of 10 000
colonies. In such cases the fuel should be retested NOTE 2 The usual volume of water to test is 0,01 ml.
using a smaller test volume (e.g. 0,01 ml) so that the The volume of water sample tested can be changed
interference effected is diluted out; if the original result in order to increase or decrease the detection level of
was genuinely due to heavy microbial contamination it the test. The test may be used to test water volumes
would normally be expected that the retest will show up to 1 ml. For example, for water present in samples
a discernable number of red/purple colonies and the from aircraft fuel tank drains it may be appropriate to
background colour will be less intense. test 0,1 ml of water to improve the detection level of
the test because under normal circumstances, water in
Some bacteria are motile and can, on prolonged aircraft tanks is clean condensate water and will have a
incubation, spread through the gel producing a large lower microbial count than water in other fuel facilities.
irregularly shaped colony, streak or patch of red or
purple colour in the gel. These bacteria usually grow
quickly and thus if tests are examined while the colonies
613.6
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AEROBIC MICROBIAL CONTENT OF FUELS AND WATER - THIXOTROPIC GEL CULTURE, IP 613
10.1 Fuel phase test portion If the number of colonies counted was greater
than 100, it shall be stated on the test report that
Calculate the number of microbial cfu/l of fuel the colony count exceeded the range currently
using the following equation: defined for quantitative assessment of microbial
content by the test method and that accuracy and
Number of microbial cfu/l = C x 1 000 precision may be low.
V
613.7
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AEROBIC MICROBIAL CONTENT OF FUELS AND WATER - THIXOTROPIC GEL CULTURE, IP 613
Report the volume of sample tested and the Report the volume of sample tested and the
conditions of test incubation, including total conditions of test incubation, including total
incubation time and, as far as is known, incubation time and, as far as is known,
the nominal incubation temperature and any the nominal incubation temperature and any
fluctuation outside the range specified. fluctuation outside the range specified.
Report the visual appearance of the original Report the visual appearance of the original
sample prior to any separation. sample prior to any separation.
It shall be stated on the test report, if testing was It shall be stated on the test report, if testing was
commenced more than 48 h after samples were commenced more than 48 h after samples were
taken. If the test is carried out after 48 h it is taken. If the test is carried out after 48 h it is
possible that the results will not reflect the viable possible that the results will not reflect the viable
microbial content present at time of sampling. microbial content present at time of sampling.
613.8
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AEROBIC MICROBIAL CONTENT OF FUELS AND WATER - THIXOTROPIC GEL CULTURE, IP 613
Annex A
(normative)
Chart for the visual estimation of the numbers of colonies
Fully quantitative range of detection
Count exact number of colonies
No. of colonies Calculation of microbial content
counted
Calculate the microbial content using the
appropriate equation for fuel or water
No colonies sample:
≥ c. 10 000
0,01 ml of fuel* ≥ c. 109 cfu/l
colonies
613.9
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