Main changes introduced in Document Nº SANTE/11312/2021 with respect to the previous

version (Document Nº SANTE 12682/2019)

1. Amendments which are concerned with editorial improvements throughout the document.

2. E4-E5 The paragraphs are rewritten to clarify the terms of recovery correction and bias
reduction. “Recovery correction” is applied when the analytical result obtained is reported
after multiplying by a recovery factor (100/Mean Recovery). This means that by using
standard addition, procedural calibration or ILIS we do not apply any “recovery
correction”. However, the result will be compensated for lower extraction and cleanup
yields (reduction of bias) by applying these approaches.
Note that the term “recovery” in this document is related to the relative bias of the
method: Relative bias (%) = Recovery (%) – 100.

3. New Appendix E with an overview of options for bias reduction and recovery correction
has been added in the document.

4. E6 The guidance of “Results ≥10 mg/kg may be rounded to three significant figures or to a
whole number” can lead to different decisions, therefore “or to a whole number” has been
deleted. The guidance of rounding up of the uncertainty has been added in Appendix D.

5. E14 Derived from the empiric studies, single residue methods (SRMs) have around 25 %
robust standard deviation in general, therefore 50% default MU can be applied for SRMs.
The last sentence regarding the possibility to apply lower expanded MU has been deleted.

6. Table 3 of identification requirements. Techniques as FT ICR MS and sector MS are deleted

as they are not used in pesticide residue methods routinely.

7. Table 4 and Glossary Example (=formula) based on calculation of matrix effect has been
added in the text and in the Glossary, as well the addition of the formula for the relative
matrix effect using a generic matrix (instead of solvent)

8. Glossary addition of definitions of “Recovery”, “Standard additon” and “Procedural

calibration”
 ANALYTICAL QUALITY CONTROL AND
METHOD VALIDATION PROCEDURES FOR
PESTICIDE RESIDUES ANALYSIS
IN FOOD AND FEED
SANTE 11312/2021
Supersedes Document No. SANTE/2019/12682. Implemented by 01/01/2022

Coordinators:
Tuija Pihlström Swedish Food Agency, SFA, Uppsala, Sweden
Amadeo R. Fernández-Alba EURL-FV, University of Almería, Almería, Spain
Carmen Ferrer Amate EURL-FV, University of Almería, Almería, Spain
Mette Erecius Poulsen EURL-CF, DTU National Food Institute, Lyngby, Denmark
Björn Hardebusch EURL-AO, CVUA Freiburg, Freiburg, Germany
Michelangelo Anastassiades EURL-SRM, CVUA Stuttgart, Fellbach, Germany

Advisory Board:
Ralf Lippold EURL-AO, CVUA Freiburg, Freiburg, Germany
Luis Carrasco Cabrera European Food Safety Authority, EFSA, Parma, Italy
André de Kok Formerly Wageningen Food Safety Research, Wageningen,
The Netherlands
Finbarr O´Regan Pesticide Registration Division, DAFM, Kildare, Ireland
Patrizia Pelosi National Institute of Health, ISS, Rome, Italy
Antonio Valverde University of Almería, Almería, Spain
Sonja Masselter AGES, Institute for Food Safety, Innsbruck, Austria
Hans Mol Wageningen Food Safety Research, Wageningen,
The Netherlands
Magnus Jezussek LGL, Erlangen, Germany
Octavio Malato EURL-FV, University of Almería, Almería, Spain
Radim Štěpán Czech Agriculture and Food Inspection Authority, Prague,
Czech Republic
CONTENT

A. Introduction and legal background 1

B. Sampling, transport, traceability and storage of laboratory samples 2

Sampling 2
Transport 2
Traceability 2
Storage 2

C. Sample analysis 3
Sample preparation and processing 3
Pooling of samples 3
Extraction 4
Extraction conditions and efficiency 4
Clean-up, concentration/reconstitution and storage of extracts 4
Chromatographic separation and determination 4
Calibration for quantification 5
General requirements 5
Analytes for calibration 5
Matrix-matched calibration 6
Standard addition 6
Effects of pesticide mixtures on calibration 6
Calibration for pesticides that are mixtures of isomers 8
Procedural Standard Calibration 8
Calibration using derivative standards or degradation products 8
Use of various internal standards 8
Data processing 9
On-going method performance verification during routine analysis 9
Quantitative methods 9
Routine recovery check 9
Acceptance criteria for routine recoveries 10
Screening methods 10
Proficiency testing 11

D. Identification of analytes and confirmation of results 12

Identification 12
Mass spectrometry coupled to chromatography 12
Requirements for chromatography 12
Requirements for mass spectrometry (MS) 12
Recommendations regarding identification using MS spectra 12
Requirements for identification using selected ions 12
Confirmation of results 14
E. Reporting results 15
Expression of results 15
Calculation of results 15
Correction for method bias 15
Rounding of data 16
Qualifying results with measurement uncertainty 16
Interpretation of results for enforcement purposes 17

F. Pesticide standards, stock solutions and calibration standard solutions 18

Identity, purity, and storage of reference standards (neat substance) 18
Preparation and storage of stock standards 18
Preparation, use and storage of working standards 19
Testing and replacement of standards 19

G. Analytical method validation and performance criteria 20

Quantitative methods 20
Method performance acceptability criteria 20
Screening methods 21
Method performance acceptability criteria 22

H. Additional recommendations 23
Contamination 23
Interference 23

Annex A. Commodity groups and representative commodities 24

Appendix A. Method validation procedure: outline and example approaches 27

Appendix B. Examples of conversion factors. 30
Appendix C. Examples for the estimation of measurement uncertainty of results 32
Appendix D. Example of rounding, reporting and interpreting results 39
Appendix E. An overview of the options to account for method bias and use of recovery
correction factors 41
Appendix F. Glossary 43
 ANALYTICAL QUALITY CONTROL AND METHOD
VALIDATION PROCEDURES FOR PESTICIDE RESIDUES
ANALYSIS IN FOOD AND FEED

A. Introduction and legal background

A1 The guidance in this document is intended for laboratories involved in the official control
of pesticide residues in food and feed across the European Union (EU). This document
describes the method validation and analytical quality control (AQC) requirements to support
the validity of data reported within the framework of official controls on pesticide residues,
including monitoring data sent to the European Food Safety Authority (EFSA), and used for
checking compliance with maximum residue levels (MRLs), enforcement actions, or
assessment of consumer exposure.
The key objectives are:
to provide a harmonized, cost-effective quality assurance and quality control system
across the EU
to ensure the quality and comparability of analytical results
to ensure that acceptable accuracy is achieved
to ensure that false positives or false negatives are avoided
to support compliance with, and specific implementation of ISO/IEC 17025
(accreditation standard)

A2 The glossary (Appendix F) should be consulted for definitions and explanation of terms
used in the text.

A3 This document is complementary and integral to the requirements in ISO/IEC 17025. It

should thus be consulted during audits and accreditations of official pesticide residue
laboratories according to ISO/IEC 17025.

In accordance with Article 37 of Regulation (EU) No. 625/2017, laboratories designated for
official control of pesticide residues must be accredited to ISO/IEC 17025. According to Article
34 of Regulation (EU) No. 625/2017, analytical methods used in the context of official controls
shall comply with relevant European Union rules or with internationally recognised rules or
protocols or, in the absence of the above, with other methods fit for the intended purpose or
developed in accordance with scientific protocols. Where the above does not apply,
validation of analytical methods may further take place within a single laboratory according
to an internationally accepted protocol.
According to Article 34 (6) of Regulation (EU) No. 625/2017, technical guidelines dealing with
the specific validation criteria and quality control procedures in relation to analytical methods
for the determination of pesticide residues may be adopted in accordance with the
procedure referred to in Article 116 (1) of Regulation (EU) No. 625/2017. The present document
includes mutually acceptable scientific rules for official pesticide residue analysis within the EU
as agreed by all Member States of the European Union and constitutes a technical guideline
in the sense of article 34 (6) of Regulation (EU) No. 625/2017.
B. Sampling, transport, traceability and storage of laboratory samples

Sampling

B1 Food samples should be taken in accordance with Directive 2002/63/EC or superseding

legislation. For feed, the regulations are laid down in Annex I of Regulation (EC) No. 152/2009
or superseding legislation. Where it is impractical to take primary samples randomly within a
lot, the method of sampling must be recorded. Samples taken according to Directive
2002/63/EC or Regulation (EC) No. 152/2009 should be considered as legal, official laboratory
samples, representative for the lot or consignment from which they are taken. Therefore, the
contribution of the sampling variability to the variability in measurement uncertainty of residue
analytical results is not dealt with in this document.

Transport

B2 Samples must be transported under appropriate conditions to the laboratory in clean

containers and robust packaging. Polythene or polypropylene bags, ventilated if appropriate,
are acceptable for most samples but low-permeability bags (e.g. nylon film) should be used
for samples to be analysed for residues of fumigants. Samples of commodities pre-packed for
retail sale should not be removed from their packaging before transport. Very fragile or
perishable products (e.g. ripe raspberries) may have to be frozen to avoid spoilage and then
transported in “dry ice” or similar, to avoid thawing in transit. Samples that are frozen at the
time of collection must be transported without thawing. Samples that may be damaged by
chilling (e.g. bananas) must be protected from both high and low temperatures.

B3 Rapid transport to the laboratory, preferably within one day, is essential for samples of
most fresh products. The condition of samples delivered to the laboratory should approximate
to that which would be acceptable to a discerning purchaser, otherwise samples should be
considered as unfit for analysis.

Traceability

B4 Samples must be identified clearly and indelibly, in a way to ensure traceability. The use
of marker pens containing organic solvents should be avoided for labelling bags containing
samples to be analysed for fumigant residues, especially if an electron capture detector is to
be used.

B5 On receipt, each laboratory sample must be allocated a unique code by the laboratory.

Storage

B6 Laboratory samples which are not analysed immediately should be stored under
conditions that minimise decay. Fresh products should be stored in the refrigerator, but
typically no longer than 5 days. Dried products may be stored at room temperature, but if
storage time is expected to exceed two weeks, they should be sub-sampled and stored in the
freezer.
C. Sample analysis

C1 All sample preparation and processing procedures should be undertaken within the
shortest time practicable to minimise sample decay and pesticide losses. Analyses for residues
of very labile or volatile pesticides should be started, and the procedures which could lead to
loss of analyte should be completed as soon as possible, preferably on the day of sample
receipt.

Sample preparation and processing

C2 Sample preparation, sample processing and sub-sampling to obtain portions should take
place before any visible deterioration occurs. The parts of the commodity that should be
analysed are stipulated in Regulation (EC) No 396/2005 Annex 1.

C3 Sample processing and storage procedures should have been demonstrated to have
no significant effect on the residues present in the sample (see Directive 2002/63/EC). Where
there is evidence that comminution (cutting and homogenisation) at ambient temperature
has a significant influence on the degradation of certain pesticide residues, it is recommended
that the samples are homogenised at low temperature (e.g. frozen and/or in the presence of
“dry ice”). Where comminution is known to affect residues (e.g. dithiocarbamates or
fumigants) and practical alternative procedures are not available, the test portion should
consist of whole units of the commodity, or segments removed from large units. For all other
analyses, the whole laboratory sample needs to be comminuted. To improve the extraction
efficiency of low moisture commodities (e.g. cereals, spices, dried herbs), it is recommended
that small particle sizes, preferably less than 1 mm, are obtained. Milling should be performed
in a way that avoids extensive heating of the samples, as heat can cause losses of certain
pesticides.

C4 Sample comminution should ensure that the sample is homogeneous enough to ensure
that sub-sampling variability is acceptable. If this is not achievable, the use of larger test
portions or replicate portions should be considered in order to be able to obtain a better
estimate of the true value. Upon homogenization or milling, samples may separate into
different fractions, e.g. pulp and peel in the case of fruits, and husks and endosperm in the
case of cereals. This fractionation can occur because of differences in size, shape and density.
Because pesticides can be heterogeneously distributed between the different fractions, it is
important to ensure that the fractions in the analytical test portion are in the same ratio as in
the original laboratory sample. It is advisable to store in a freezer a sufficient number of sub-
samples or analytical test portions for the number of analyses/repeated analyses that are likely
to be required.

Pooling of samples

C5 Pooling of individual samples or sample extracts may be considered as an option for the
analyses of commodities with a low frequency of pesticide residues (e.g. organic or animal
products), provided that the detection system is sensitive enough. For example, when pooling
5 samples, the limit of quantification (LOQ) or screening detection limit (SDL) must be at least
5 times lower than the reporting limit (RL).

C6 Pooling of sub-samples before extraction will reduce the number of analyses required,
but in some cases additional mixing or homogenisation of the pooled sub-samples, before
withdrawing the analytical portion, may be necessary. Alternatively, sample extracts can be
pooled before injection. The original samples or the extracts must be re-analysed in cases of
pesticide residue findings at relevant levels.
Extraction

Extraction conditions and efficiency

C7 The recovery of incurred residues can be lower than the percentage recovery obtained
from the analysis of spiked samples.1 Where practicable, samples containing incurred residues
can be analysed using varying extraction conditions to obtain further information on extraction
efficiency. A number of parameters such as sample processing, temperature, pH, time, etc.,
can affect extraction efficiency and analyte stability. To improve the extraction efficiency of
low moisture commodities (cereals, dried fruits), addition of water to the samples prior to
extraction is recommended. The impact of the shaking time on analyte losses should be
checked to avoid unacceptable losses. Where the MRL residue definition of a pesticide
includes salts, it is important that the salts are dissociated by the analytical method used. This
is typically achieved by the addition of water before, or during, the extraction process. A
change of pH may also be necessary. Where the residue definition includes esters or
conjugates that cannot be analysed directly, the analytical method should involve a hydrolysis
step.

Clean-up, concentration/reconstitution and storage of extracts

C8 A clean-up or dilution step may be necessary to reduce matrix interferences and reduce
contamination of the instrument system leading to an improved selectivity and robustness.
Clean-up techniques take advantage of the difference in physicochemical properties (e.g.
polarity, solubility, molecular size) between the pesticides and the matrix components.
However, the use of a clean-up step in a multi-residue method can cause losses of some
pesticides.

C9 Concentration of sample extracts can cause precipitation of matrix-components and,

in some cases, losses of pesticides. Similarly, dilution of the extract with a solvent of a different
polarity can also result in pesticide losses because of decreased solubility (e.g. dilution of
methanol or acetonitrile extracts with water).

C10 To avoid losses during evaporation steps, the temperature should be kept as low as is
practicable. A small volume of a high boiling point solvent may be used as a “keeper”.
Foaming and vigorous boiling of extracts, or dispersion of droplets, must be avoided. A stream
of dry nitrogen or vacuum centrifugal evaporation is generally preferable to the use of an air
stream for small-scale evaporation, as air is more likely to lead to oxidation or the introduction
of water and other possible contaminants.

C11 Analyte stability in extracts should be evaluated during method validation. Storage of
extracts in a refrigerator or freezer will minimise degradation. Losses of pesticides in extracts at
room temperature can occur, e.g. in vials in an instrument´s auto sampler rack.

Chromatographic separation and determination

C12 Sample extracts are normally analysed using capillary gas chromatography (GC) and/or
high performance or ultra performance liquid chromatography (HPLC or UPLC) coupled to
mass spectrometry (MS) for the identification and quantification of pesticides in food and feed
samples. Various MS detection systems can be used, such as a single or triple quadrupole, ion
trap, time of flight or orbitrap. Typical ionisation techniques are: electron ionisation (EI),
chemical ionisation (CI), atmospheric pressure chemical ionisation (APCI) and electrospray
ionisation (ESI). Different acquisition modes may be used such as full-scan, selected ion
monitoring (SIM), selected reaction monitoring (SRM) and multiple reaction monitoring (MRM).

1 Information on the evaluation of the extraction efficiency is available in SANTE/2017/10632 in its latest version.
C13 Nowadays, selective detectors for GC (ECD, FPD, PFPD, NPD) and LC (DAD,
fluorescence) are less widely used as they offer only limited specificity. Their use, even in
combination with different polarity columns, does not provide unambiguous identification.
These limitations may be acceptable for frequently found pesticides, especially if some results
are also confirmed using a more specific detection technique. In any case, such limitations in
the degree of identification should be acknowledged when reporting the results.

Calibration for quantification

General requirements

C14 The lowest calibration level (LCL) must be equal to, or lower than, the calibration level
corresponding to the RL. The RL must not be lower than the LOQ.

C15 Bracketing calibration must be used unless the determination system has been shown
to be free from significant drift, e.g. by monitoring the response of an internal standard. The
calibration standards should be injected at least at the start and end of a sample sequence.
If the drift between two bracketing injections of the same calibration standard exceeds 30%
(taking the higher response as 100%) the bracketed samples containing pesticide residues
should be re-analysed. Results for those samples that do not contain any of those analytes
showing unacceptable drift can be accepted provided that the response at the calibration
level corresponding to the RL remained measurable throughout the batch, to minimise the
possibility of false negatives. If required, priming of the GC or LC system should be performed
immediately prior to the first series of calibration standard solutions in a batch of analyses.

C16 The detector response from the analytes in the sample extract should lie within the range
of responses from the calibration standard solutions injected. Where necessary extracts
containing high-level residues above the calibrated range must be diluted and re-injected. If
the calibration standard solutions are matrix-matched (paragraph C21-23) the matrix
concentration in the calibration standard should also be diluted proportionately.

C17 Multi-level calibration (three or more concentrations) is preferred. An appropriate

calibration function must be used (e.g. linear, quadratic, with or without weighing). The
deviation of the back-calculated concentrations of the calibration standards from the true
concentrations, using the calibration curve in the relevant region should not be more than
±20%.

C18 Calibration by interpolation between two levels is acceptable providing the difference
between the 2 levels is not greater than a factor of 10 and providing the response factors of
the bracketing calibration standards are within acceptable limits. The response factor of
bracketing calibration standards at each level should not differ by more than 20% (taking the
higher response as 100%).

C19 Single-level calibration may also provide accurate results if the detector response of the
analyte in the sample extract is close to the response of the single-level calibration standard
(within ±30%). Where a sample is spiked with an analyte for recovery determination purposes
at a level corresponding to the LCL, recovery values <100% may be calculated using a single
point calibration at the LCL. This particular calculation is intended only to indicate analytical
performance achieved at the LCL and does not imply that residues <LCL may be determined
in this way.

Analytes for calibration

C20 All targeted analytes must be injected in every batch of samples, at least at the level
corresponding to the RL. Sufficient response at this level is required and should be checked to
avoid false negatives.
Matrix-matched calibration

C21 Matrix effects are known to occur frequently in both GC and LC methods and should be
assessed at the initial method validation stage. Matrix-matched calibration is commonly used
to compensate for matrix effects. Extracts of blank matrix, preferably of the same type as the
sample, should be used for calibration. An alternative practical approach to compensate for
matrix effects in GC-analyses is the use of analyte protectants that are added to both the
sample extracts and the calibration standard solutions in order to equalise the response of
pesticides in solvent calibrants and sample extracts. The most effective way to compensate
for matrix effects is the use of standard addition or isotopically labelled internal standards.

C22 In GC, representative matrix calibration, using a single representative matrix or a mixture
of matrices, can be used to calibrate a batch of samples containing different commodities.
Although this is preferable to the use of calibration standards in solvent, compared to exact
matrix matching, it is likely that the calibration will be less accurate. It is recommended that
the relative matrix effects are assessed and the approach is modified accordingly.

C23 Compensation for matrix effects in LC-MS is more difficult to achieve because the matrix
effects depend on the co-elution of each individual pesticide with co-extracted matrix
components, which vary between different commodities. The use of matrix-matched
calibration is, therefore, likely to be less effective compared to GC.

Standard addition

C24 Standard addition to analytical test portions (sample standard addition) is designed to
compensate for matrix effects and losses during sample preparation. This technique assumes
some knowledge of the likely residue level of the analyte in the sample (e.g. from a first
analysis), so that the amount of added analyte is similar to that already present in the sample.
In particular, it is recommended that standard addition is used for confirmatory quantitative
analyses in cases of MRL exceedances and/or when no suitable blank material is available for
the preparation of matrix-matched standard solutions. For standard addition a test sample is
divided in three (or preferably more) test portions. One portion is analysed directly, and
increasing amounts of the analyte are added to the other test portions immediately prior to
extraction. The amount of analyte added to the test portion should be between one and five
times the estimated amount of the analyte already present in the sample. The concentration
of analyte present in the “unspiked” sample is calculated from the relative responses of the
analyte in the sample and the spiked samples . In the standard addition approach the
concentration of the analyte in the test sample is derived by extrapolation, thus a linear
response in the appropriate concentration range is essential for achieving accurate results.

C25 Standard addition of at least two known quantities of analyte to aliquots of the sample
extract, prior to injection (extract standard addition), is another form of standard addition. In
this case adjustment is only for matrix effects, but not for recovery.

Effects of pesticide mixtures on calibration

C26 The detector response of individual pesticides in multi-pesticide calibration standards

may be affected by one or more of the other pesticides in the same solution. Before use, multi-
pesticide calibration standard solutions prepared in pure solvent should be checked against
calibration standard solutions each containing a single pesticide (or a fewer number of
pesticides) to confirm similarity of detector response. If the responses differ significantly,
residues must be quantified using individual calibration standards in matrix, or better still, by
standard addition.
Calibration for pesticides that are mixtures of isomers

C27 Quantification involving mixed isomer (or similar) calibration standard solutions, can be
achieved by using either: summed peak areas, summed peak heights, or measurement of a
single component, whichever is the most accurate.

Procedural Standard Calibration

C28 The use of procedural standards compensates for matrix effects and losses during
extraction associated with certain pesticide/commodity combinations, especially where
isotopically labelled standards are not available or are too costly. It is only applicable when a
series of samples of the same type are to be processed within the same batch (e.g. products
of animal origin, products with high fat content). Procedural standards are prepared by spiking
a series of blank test portions with different amounts of analyte, prior to extraction. The
procedural standards are then analysed in exactly the same way as the samples.

C29 Another application of procedural standard calibration is where pesticides need to be

derivatised, but reference standards of the derivatives are not available or the derivatisation
yield is low or highly matrix dependent. In such cases it is recommended to spike the standards
to blank matrix extracts just prior to the derivatisation step. In this case the procedural standard
calibration will also compensate for varying derivatisation yields.

Calibration using derivative standards or degradation products

C30 Where the pesticide is determined as a derivative or a degradation product, the

calibration standard solutions should be prepared from a “pure” reference standard of the
derivative or degradation product, if available.

Use of various internal standards

C31 An internal standard (IS) is a chemical compound added to the sample test portion or
sample extract in a known quantity at a specified stage of the analysis, in order to check the
correct execution of (part of) the analytical method. The IS should be chemically stable and/or
typically show the same behaviour as of the target analyte.

C32 Depending on the stage of the analytical method in which the addition of IS takes place
different terms are used. An injection internal standard (I-IS), also called instrument internal
standard, is added to the final extracts, just prior to the determination step (i.e. at injection). It
will allow a check and possible correction for variations in the injection volume. A procedural
internal standard (P-IS) is an internal standard added at the beginning of the analytical
method to account for various sources of errors throughout all stages in the method. An IS can
also be added at a different stage of the analytical method to correct for both systematic
and random errors that may have occurred during a specific stage of the analytical method.
When selecting ISs it should be assured that they do not interfere with the analysis of the target
analytes and that it is highly unlikely that they are present in the samples to be analysed.

C33 For multi-residue methods it is advisable to use more than one IS in case the recovery or
detection of the primary IS is compromised. If only used to adjust for simple volumetric
variations the ISs should exhibit minimal losses or matrix effects. When analysing a specific
group of analytes with similar properties the IS can be chosen to exhibit similar properties and
analytical behaviour to the analytes of interest. If the IS used for calculations has a significantly
different behaviour (e.g. as to recovery or matrix effect) to one or more of the target analytes
it will introduce an additional error in all quantifications.

C34 When the IS is added to each of the calibration standard solutions in a known
concentration the detector response ratio of analyte and IS obtained from the injected
calibration standard solutions are then plotted against their respective concentrations. The
concentration of analyte is then obtained by comparing the detector response ratio of
analyte and IS of the sample extract, against the calibration curve.

C35 An isotopically labelled internal standard (IL-IS) is an internal standard with the same
chemical structure and elemental composition as the target analyte, but one or more of the
atoms of the molecule of the target analyte are substituted by isotopes (e.g. deuterium, 15N,
13C, 18O). A prerequisite for the use of IL-ISs is the use of mass spectrometry, which allows the

simultaneous detection of the co-eluting non-labelled analytes and the corresponding IL-ISs.
IL-ISs can be used to accurately compensate for both analyte losses and volumetric variations
during the procedure, as well as for matrix effects and response drift in the chromatography-
detection system. Losses during extract storage (e.g. due to degradation) will also be
corrected for by the IL-IS. Use of IL-ISs will not compensate for incomplete extraction of incurred
residues.

C36 IL-ISs, can also be used to facilitate the identification of analytes because the retention
time and peak shape of the target analyte and corresponding IL-IS should be the same.

C37 IL-ISs should be largely free of the native analyte to minimize the risk of false positive
results. In the case of deuterated standards, an exchange of deuterium with hydrogen atoms,
e.g. in solvents, can lead to false positives and/or adversely influence quantitative results.

Data processing

C38 Chromatograms must be examined by the analyst and the baseline fit checked and
adjusted, as is necessary. Where interfering or tailing peaks are present, a consistent approach
must be adopted for the positioning of the baseline. Peak area or peak height, whichever
yields the more accurate results, may be used.

On-going method performance verification during routine analysis

Quantitative methods

Routine recovery check

C39 Where practicable, recoveries of all analytes in the scope should be measured within
each batch of analyses. If this requires a disproportionately large number of recovery
determinations, the number of analytes may be reduced. However, it should be in compliance
with the minimum number specified in Table 1. This means, that at least 10% of the analytes
(with a minimum of 5) should be included per detection system.

Table 1. Minimum frequency of recovery checks (quantitative method performance

verification)
Analytes for recovery check
All other analytes
(minimum)
Number of At least 10 % of the scope per Within a rolling programme to
analytes detection system covering all critical include all other analytes as well as
aspects of the method representative commodities from
different commodity groups
Minimum Every batch At least every 12 months, preferably
frequency of every 6 months
recovery checks
Level RL RL
C40 If at some point during the rolling programme (Table 1) the recovery of an analyte is
outside of the acceptable range (see paragraph C43), then all of the results produced since
the last satisfactory recovery must be considered to be potentially erroneous.

C41 The recovery of an analyte should normally be determined by spiking within a range
corresponding to the RL and 2-10 x the RL, or at the MRL, or at a level of particular relevance
to the samples being analysed. The spiking level may be changed to provide information on
analytical performance over a range of concentrations. Recovery at levels corresponding to
the RL and MRL is particularly important. In cases where blank material is not available (e.g.
where inorganic bromide is to be determined at low levels) or where the only available blank
material contains an interfering compound, the spiking level for recovery should be ≥ 3 times
the level present in the blank material. The analyte (or apparent analyte) concentration in
such a blank matrix extract should be determined from multiple test portions. If necessary,
recoveries can be calculated using blank subtracted calibration, but the use of blank
subtraction should be reported with the results. They must be determined from the matrix used
in spiking experiments and the blank values should not be higher than 30% of the residue level
corresponding to the RL.

C42 Where a residue is determined as a common moiety, routine recovery may be

determined using the component that either normally predominates in residues or is likely to
provide the lowest recovery.

Acceptance criteria for routine recoveries

C43 Acceptable limits for individual recovery results should normally be within the range of
the mean recovery +/- 2x RSD. For each commodity group (see Annex A) the mean recovery
results and RSDs may be taken from initial method validation or from on-going recovery results
(within laboratory reproducibility, RSDwR). A practical default range of 60-140 % may be used
for individual recoveries in routine analysis. Recoveries outside the above mentioned range
would normally require re-analysis of the batch, but the results may be acceptable in certain
justified cases. For example, where the individual recovery is unacceptably high and no
residues are detected, it is not necessary to re-analyse the samples to prove the absence of
residues. However, consistently high recoveries or RSDs outside ± 20% must be investigated.

C44 Analysis of certified reference materials (CRMs) is the preferable option to provide
evidence of method performance. As an alternative, in-house quality control samples may be
analysed regularly instead. Where practicable, exchange of such materials between
laboratories provides an additional, independent check of accuracy .

Screening methods

C45 Screening methods, especially those involving automated MS-based detection, offer
laboratories a cost-effective means to extend their analytical scope to analytes which
potentially have a low probability of being present in the samples. Analytes that occur more
frequently should continue to be sought and measured using validated quantitative multi-
residue methods.

C46 For qualitative multi-residue methods targeting very large numbers of analytes, it may
not be practicable to include all analytes from the scope in each batch of analyses. To verify
overall method performance for each batch, at least 10 % of the analytes (from the validated
scope) that cover all critical points of the method should be spiked to the matrix. In a rolling
programme, the performance for all analytes from the validated scope should be verified as
indicated in Table 2.

C47 When using a screening method, the calibration standard solution corresponding to the
RL or SDL should be positioned, at least at the beginning and the end of the sample sequence
to ensure that the analytes remain detectable throughout the whole batch of samples in the
sequence. When an analyte is detected, it can only be tentatively reported. A subsequent
confirmatory analysis using a validated quantitative method, including an appropriate
calibration procedure, must be applied before a reliable quantitative result may be reported.
If an analyte is not detected, then the result is reported as <SDL mg/kg or <RL mg/kg.

Table 2. Minimum frequency of the detectability checks (screening method performance

verification).
Analytes for detectability check
All other analytes
(minimum)
Number of At least 10 % of the scope per All analytes from the validated
analytes detection system covering all critical qualitative scope
aspects of the method
Minimum Every batch At least every 12 months, preferably
frequency of every 6 months
detectability
checks
Level SDL or RL see paragraph G8 SDL or RL
Criterion All analytes detectable All (validated) analytes detectable

Proficiency testing

C48 For all official control laboratories it is mandatory to participate regularly in proficiency
test schemes, particularly those organised by the EURLs. When false positive(s) or negative(s)
are reported, or the accuracy (z scores) achieved in any of the proficiency tests is
questionable or unacceptable, the problem(s) should be investigated. False positive(s),
negative(s) and, or unacceptable performance, have to be rectified before proceeding with
further determinations of the analyte/matrix combinations involved.
D. Identification of analytes and confirmation of results

Identification

Mass spectrometry coupled to chromatography

D1 Mass spectrometry coupled to a chromatographic separation system is a very powerful

combination for identification of an analyte in the sample extract. It simultaneously provides
retention time, mass/charge ratios (m/z) and relative abundance (intensity) data.

Requirements for chromatography

D2 The minimum acceptable retention time for the analyte(s) under examination should be
at least twice the retention time corresponding to the void volume of the column. The retention
time of the analyte in the extract should correspond to that of the calibration standard (may
need to be matrix-matched) with a tolerance of ±0.1min, for both gas chromatography and
liquid chromatography. Larger retention time deviations are acceptable where both retention
time and peak shape of the analyte match with those of a suitable IL-IS, or evidence from
validation studies is available. IL-IS can be particularly useful where the chromatographic
procedure exhibits matrix induced retention time shifts or peak shape distortions. Overspiking
with the analyte suspected to be present in the sample will also help to increase confidence
in the identification.

Requirements for mass spectrometry (MS)

D3 MS detection can provide mass spectra, isotope patterns, and/or signals for selected
ions. Although mass spectra can be highly specific for an analyte, match values differ
depending on the particular software used which makes it impossible to set generic guidance
on match values for identification. This means that laboratories that use spectral matching for
identification need to set their own criteria and demonstrate these are fit-for-purpose.
Guidance for identification based on MS spectra is limited to some recommendations whereas
for identification based on selected ions more detailed criteria are provided.

Recommendations regarding identification using MS spectra

D4 Reference spectra for the analyte should be generated using the same instruments and
conditions used for analysis of the samples. If major differences are evident between a
published spectrum and the spectrum generated within the laboratory, the latter must be
shown to be valid. To avoid distortion of ion ratios the concentration of the analyte ions must
not overload the detector. The reference spectrum in the instrument software can originate
from a previous injection (without matrix present), but is preferably obtained from the same
analytical batch.

D5 In case of full scan measurement, careful subtraction of background spectra, either

manual or automatic, by deconvolution or other algorithms, may be required to ensure that
the resultant spectrum from the chromatographic peak is representative. Whenever
background correction is used, this must be applied uniformly throughout the batch and
should be clearly recorded.

Requirements for identification using selected ions

D6 Identification relies on the correct selection of ions. They must be sufficiently selective for
the analyte in the matrix being analysed and in the relevant concentration range. Molecular
ions, (de)protonated molecules or adduct ions are highly characteristic for the analyte and
should be included in the measurement and identification procedure whenever possible. In
general, and especially in single-stage MS, high m/z ions are more selective than low m/z ions
(e.g. m/z <100). However, high mass m/z ions arising from loss of water or loss of common
moieties may be of little use. Although characteristic isotopic ions, especially Cl or Br clusters,
may be particularly useful, the selected ions should not exclusively originate from the same
part of the analyte molecule. The choice of ions for identification may change depending on
background interferences. In high resolution MS, the selectivity of an ion of the analyte is
determined by the narrowness of the mass extraction window (MEW) that is used to obtain the
extracted ion chromatogram. The narrower the MEW, the higher the selectivity. However, the
minimum MEW that can be used relates to mass resolution.

D7 Extracted ion chromatograms of sample extracts should have peaks of similar retention
time, peak shape and response ratio to those obtained from calibration standards analysed
at comparable concentrations in the same batch. Chromatographic peaks from different
selective ions for the analyte must fully overlap. Where an ion chromatogram shows evidence
of significant chromatographic interference, it must not be relied upon for identification.

D8 Different types and modes of mass spectrometric detectors provide different degrees of
selectivity , which relates to the confidence in identification. The requirements for identification
are given in Table 3. They should be regarded as guidance criteria for identification, not as
absolute criteria to prove the presence or absence of an analyte.

Table 3. Identification requirements for different MS techniques.2

MS detector/Characteristics Requirements for identification
Typical systems Acquisition minimum number additionally
Resolution
(examples) of ions
S/N ≥ 3d)
Single MS Analyte peaks from
full scan, limited m/z range, SIM 3 ions both product ions in
quadrupole,
ion trap, TOF the extracted ion
chromatograms must
fully overlap.
Unit mass
resolution Ion ratio from sample
MS/MS selected or multiple reaction extracts should be
monitoring (SRM, MRM), mass within
triple quadrupole, resolution for precursor-ion 2 product ions ±30% (relative)
ion trap, Q-trap, isolation equal to or better than of average
Q-TOF, Q-Orbitrap unit mass resolution of calibration
standards from same
sequence
S/N ≥ 3d)

Analyte peaks from

full scan, limited m/z range, SIM,
High resolution MS: 2 ions with precursor and/or
Accurate mass fragmentation with or without
(Q-)TOF mass accuracy product ion(s) in the
measurement precursor-ion selection, or
(Q-)Orbitrap ≤ 5 ppma, b, c) extracted ion
combinations thereof
chromatograms must
fully overlap.

Ion ratio: see D12

a) preferably including the molecular ion, (de)protonated molecule or adduct ion
b) including at least one fragment ion
c) <1 mDa for m/z <200
d) in case noise is absent, a signal should be present in at least 5 subsequent scans

D9 The relative intensities or ratios of selective ions, expressed as a ratio relative to the most
intense ion, that are used for identification, should match with the reference ion ratio. The
reference ion ratio is the average obtained from solvent standards measured in the same
sequence and under the same conditions as the samples. Standards in matrix may be used

2
For definition of terms relating to mass spectrometry see Murray et al. (2013) Pure Appl. Chem., 85:1515–1609.
instead of solvent standards as long as they have been demonstrated to be free of
interferences for the ions used at the retention time of the analyte. For determination of the
reference ion ratio, responses outside the linear range should be excluded.

D10 Larger tolerances may lead to a higher percentage of false positive results. Similarly, if
the tolerances are decreased, then the likelihood of false negatives will increase. The
tolerance given in Table 3 3,4 should not be taken as an absolute limit and automated data
interpretation based on the criteria without complementary interpretation by an experienced
analyst is not recommended.

D11 As long as sufficient sensitivity and selectivity are obtained for both ions, and responses
are within the linear range, ion ratios in unit mass resolution MS/MS have shown to be
consistent3 and should not deviate more than 30% (relative) from the reference value.

D12 For accurate mass measurement / high resolution mass spectrometry, the variability of
ion ratios is not only affected by S/N of the peaks in the extracted ion chromatograms, but
may also be affected by the way fragment ions are generated, and by matrix. For example,
the range of precursor ions selected in a fragmentation scan event ('all ions', precursor ion
range of 100 Da, 10 Da, or 1 Da) results in different populations of matrix ions in the collision cell
which can affect fragmentation compared to solvent standards. Furthermore, the ratio of two
ions generated in the same fragmentation scan event tends to yield more consistent ion ratios
than the ratio of a precursor from a full scan event and a fragment ion from a fragmentation
scan event. For this reason, no generic guidance value for ion ratio can be given. Due to the
added value of accurate mass measurement, matching ion ratios are not necessary,
however, they may provide additional support for identification.

D13 For a higher degree of confidence in identification, further evidence may be gained
from additional mass spectrometric information. For example, evaluation of full scan spectra,
isotope pattern, adduct ions, additional accurate mass fragment ions, additional product ions
(in MS/MS), or accurate mass product ions.

D14 The chromatographic profile of the isomers of an analyte may also provide evidence.
Additional evidence may be sought using a different chromatographic separation system
and/or a different MS-ionisation technique.

Confirmation of results

D15 If the initial analysis does not provide unambiguous identification or does not meet the
requirements for quantitative analysis, a confirmatory analysis is required. This may involve re-
analysis of the extract or the sample. In cases where a MRL is exceeded, a confirmatory
analysis of another analytical portion is always required. For unusual pesticide/matrix
combinations, a confirmatory analysis is also recommended.

D16 The use of different determination techniques and/or confirmation of qualitative and/or
quantitative results by an independent expert laboratory will provide further supporting
evidence.

3 H.G.J. Mol, P. Zomer, M. García López, R.J. Fussell, J. Scholten, A. de Kok, A. Wolheim, M. Anastassiades, A. Lozano, A. Fernandez Alba.
Analytica Chimica Acta 873 (2015) 1–13
4 S.J. Lehotay,Y. Sapozhnikova, H.G.J. Mol, Trends in Analytical Chemistry 69 (2015) 62–75.
E. Reporting results

Expression of results

E1 The results from the individual analytes measured must always be reported and their
concentrations expressed in mg/kg. Where the residue definition includes more than one
analyte (see examples, Appendix B), the respective sum of analytes must be calculated as
stated in the residue definition and must be used for checking compliance with the MRL. If the
analytical capabilities of a laboratory do not allow quantification of the full sum of a residue
as stated in the residue definition, a part of the sum may be calculated but this should be
clearly indicated in the report. In case of electronic submission of results for samples that are
part of a monitoring programme, concentrations of all individual analytes and their LOQs must
be submitted.

E2 For quantitative methods, residues of individual analytes below the RL must be reported
as <RL mg/kg. Where screening methods are used and a pesticide is not detected, the result
must be reported as <SDL mg/kg.

Calculation of results

E3 Where the same homogenised sample is analysed by two techniques, the result should
be that obtained using the technique which is considered to be the most accurate. Where
two results are obtained by two equally accurate techniques or by replicate measurement(s)
of an analytical test portion of the homogenised sample using the same technique, the mean
of the result should be reported.

In case there are two replicates the relative difference of the individual results should not
exceed 30% of the mean. Close to the RL, the variation may be higher and additional caution
is required in deciding whether or not this limit has been exceeded.

Correction for method bias

E4 As a practical approach, residues results do not have to be adjusted for method bias
when the mean bias is less than 20% and the default expanded measurement uncertainty of
50% is not exceed.

In case the bias exceeds 20%, the result can be mathematically corrected using a recovery
factor. In this case, the initial result obtained for the applicable pesticide after analysis is
multiplied with the recovery factor [100%/recovery%]. Regarding the recovery% to be used for
correction for recovery, there are multiple options. These include the mean recovery obtained
during initial validation, the mean recovery obtained during on-going validation, or the (mean)
recovery obtained for spiked samples concurrently analysed with the samples. The most
appropriate option depends on the recovery data available for a method for the various
pesticides and matrices, and may therefore differ for different laboratories.

Aspects to take into consideration in choosing between the recovery correction options
include the reliability and consistency of the recovery of a pesticide for a certain matrix or
group of matrices over time, and dependency of the recovery on concentration. On-going
validation data covering multiple matrices from a commodity group (see Annex A) over a
longer period of time provides valuable information to make an informed decision and to what
extent recoveries from different matrices can be averaged.

E5 In case of lack of a suitable recovery factor to be used for recovery correction, alternative
approaches to reduce method bias may be considered to avoid the need for recovery
correction, e.g. the use of standard addition before sample extraction (C24), addition of an
isotopically labelled internal standard (IL-IS, C35) before sample extraction, or the use of
procedural calibration (C28).

An overview of the options to account for method bias and use of recovery correction
factors is provided in Appendix E, Table 1 and 2.

Rounding of data

E6 It is essential to maintain uniformity in reporting results for pesticide residues. In general,

results at or above the RL but <10 mg/kg should be rounded to two significant figures. Results
≥10 mg/kg should be rounded to three significant figures. The RL should be rounded to 1
significant figure at <10 mg/kg and two significant figures at ≥10 mg/kg. These rounding rules
do not necessarily reflect the uncertainty associated with the reported data. Additional
significant figures may be recorded for the purpose of statistical analysis and when reporting
results for proficiency tests. In some cases the rounding may be specified by, or agreed with
the customer/stakeholder of the control or monitoring programme. Rounding to significant
figures should be done after the calculation of the result. See Appendix D.

Qualifying results with measurement uncertainty

E7 It is a requirement under ISO/IEC 17025 that laboratories determine and make available
the (expanded) measurement uncertainty (MU), expressed as U’, associated with analytical
results. Laboratories should have sufficient repeatability/reproducibility data from method
validation/verification, inter-laboratory studies (e.g. proficiency tests), and in-house quality
control tests, which can be used to estimate the MU5.
The MU describes the range around a reported or experimental result within which the true
value is expected to lie within a defined probability (confidence level). MU ranges must take
into consideration all potential sources of error.

E8 MU data6 should be applied cautiously to avoid creating a false sense of certainty about
the true value. Estimates of typical MU that are based on previous data may not reflect the
MU associated with the analysis of a current sample. Typical MU may be estimated using an
ISO (Anonymous 1995, ’Guide to the expression of uncertainty in measurement’ ISBN 92-67-
10188-9) or Eurachem7 approach. Reproducibility RSD (or repeatability RSD if reproducibility
data are not available) may be used, but the contribution of additional uncertainty sources
(e.g. heterogeneity of the laboratory sample from which the test portion has been withdrawn)
due to differences in the procedures used for sample preparation, sample processing and sub-
sampling should also be included. Extraction efficiency and differences in standard
concentrations should also be taken into account. MU data relate primarily to the analyte and
matrix used and should only be extrapolated to other analyte/matrix combinations with
extreme caution. MU tends to increase at lower residue levels, especially as the LOQ is
approached. It may therefore be necessary to generate MU data over a range of residue
levels to reflect those typically found during routine analysis.

E9 Two approaches for estimation of MU with example calculations are provided in

Appendix C. One is based on the use of intra-laboratory QC data for individual pesticides in a
commodity group. The second deals with an approach that derives a generic MU for the
laboratory's multi-residue methods based on an overall combination of intra-laboratory
precision and PT-derived bias.

E10 A practical approach for a laboratory to verify its MU estimation, based on its own within-
laboratory data, is by evaluating its performance in recent proficiency tests (see Appendix C).

5 Codex Alimentarius Commission Guideline CAC/GL 59-2006, Guidelines on estimation of uncertainty of results.
6 L. Alder et al., Estimation of measurement uncertainty in pesticide residue analysis. J. AOAC Intern., 84 (2001) 1569-1577.
7 EURACHEM/CITAC Guide, Quantifying uncertainty in analytical measurement, 3rd Edition, 2012,
http://www.eurachem.org/images/stories/guides/pdf/QUAM2012_P1.pdf
Proficiency test results can provide an important indication of the contribution of the inter-
laboratory bias to the MU of an individual laboratory. Replicate analyses of a specific sample,
combined with concurrent recovery determinations, can improve the accuracy of a single
laboratory result and improve the estimate of MU. These uncertainty data will include the
repeatability of sub-sampling and analysis, but not any interlaboratory bias. This practice will
be typically applied when the analytical results are extremely important (e.g. an MRL
compliance check).

Interpretation of results for enforcement purposes

E11 Assessment of whether a sample contains a residue which is an MRL exceedance is

generally only a problem in cases where the level is relatively close to the MRL. The decision
should take account of concurrent AQC data and the results obtained from replicate test
portions, together with any assessment of typical MU. The possibility of residue loss or cross-
contamination having occurred before, during, or after sampling, must also be considered.

E12 A default expanded MU of 50% (corresponding to a 95% confidence level and a

coverage factor of 2) has been calculated from EU proficiency tests. In general, this 50 % value
covers the inter-laboratory variability between the European laboratories and is
recommended to be used by regulatory authorities in cases of enforcement decisions (MRL-
exceedances). A prerequisite for the use of the 50% default expanded MU is that the
laboratory must demonstrate that its own expanded MU is less than 50%. For further risk
management evaluations, in specific and justified cases, laboratories may report to regulatory
authorities their own estimated lower expanded MU value if supported by sufficient intra- and
inter-laboratory evidence.

E13 If laboratories experience individual cases of unacceptably high repeatability, or within-

laboratory reproducibility-RSDwR (e.g. at very low concentration levels), or unsatisfactory z-
scores during proficiency tests, the use of a correspondingly higher MU figure must be
considered.

E14 If required, the result should be reported together with the expanded MU as follows:
Result = x ± U (units), with x representing the measured value. For official food control by
regulatory authorities, compliance with the MRL must be checked by assuming that the MRL is
exceeded if the measured value exceeds the MRL by more than the expanded uncertainty (x
– U > MRL). With this decision rule, the value of the measurand should be above the MRL with
at least 97.5% confidence.8 Thus, the sample is considered non-compliant if x-U > MRL. E.g., in
case the MRL = 1, the result x = 2.2 and U=50%, then x-U = 2.2 – 1.1 (= 50% of 2.2)=1.1, which
is >MRL.

8 EURACHEM/CITAC Guide, Use of uncertainty information in compliance assessment, 1 st Edition, 2007.

F. Pesticide standards, stock solutions and calibration standard solutions

Identity, purity, and storage of reference standards (neat substance)

F1 Reference standards of analytes should be of known purity and must be assigned with a
unique identification code and recorded in a way that ensures full traceability (including
source of supply, badge number, date of receipt and place of storage). They should be stored
at low temperature, preferably in a freezer, with light and moisture excluded, i.e. under
conditions that minimise the rate of degradation. Under such conditions, the supplier’s expiry
date, which is often based on less stringent storage conditions, may be replaced, as
appropriate for each standard, by a date allowing for storage up to 10 years. This way the
reference standard may be retained and a new expiry date may be allocated, providing that
it is checked by the appropriate date and its purity is shown to remain acceptable. Ideally,
the chemical identity of a freshly acquired reference standard should be checked if the
analyte is new to the laboratory. For screening purposes only, the reference standards and
derived solutions may be used after the expiry date, providing that the RL can be achieved. If
the pesticide has been detected, a new or certified reference standard and calibration
standard solution made thereof has to be used for quantification..

Preparation and storage of stock standards

F2 When preparing stock standards (solutions, dispersions or gaseous dilutions) of reference

standards (analytes and internal standards) documentation should be such as to ensure full
traceability. The date of preparation, the identity and mass (or volume, for highly volatile
analytes) of the reference standard and the identity and volume of the solvent (or other
diluents) must be recorded. The solvent(s) must be appropriate to the analyte (solubility, no
chemical reactions) and method of analysis. Moisture must be excluded during equilibration
of the reference standard to room temperature before use, and concentrations must be
corrected for the purity of the reference standard.

F3 For the preparation of stock standards not less than 10 mg of the “reference” standard
should be weighed using a 5 decimal place balance. The ambient temperature should be
corresponding to that, at which the glassware has been calibrated, otherwise preparation of
the stock and working standard should be based on mass measurement. Volatile liquid
analytes should be dispensed by volume or weight (if the density is known) directly into solvent.
Gaseous (fumigant) analytes may be dispensed by bubbling into solvent and weighing the
mass transferred, or by preparing gaseous dilutions (e.g. with a gas-tight syringe, avoiding
contact with any reactive metals).

F4 Stock standards must be labelled indelibly, allocated an expiry date and stored at low
temperature in the dark in containers that prevent any loss of solvent and entry of water.
Following equilibration to room temperature, solutions must be re-mixed and a check made
to ensure that the analyte remains completely dissolved, especially where solubility at low
temperatures is limited. The use of a different solvent, different storage conditions or the
preparation of stock solutions with lower concentration can help to overcome this problem.
The stability of pesticides may depend on the solvent used. Currently available data show that
stock standards solutions of the large majority of pesticides, when stored adequatley, are
sufficiently stable for several years when prepared in organic solvents such as toluene,
acetone, acetonitrile, methanol or ethyl acetate.

F5 For suspensions (e.g. dithiocarbamates) and solutions (or gaseous dilutions) of highly
volatile fumigants that should be prepared freshly, the concentration of the analyte solution
should be compared with a second solution made independently at the same time.
Preparation, use and storage of working standards

F6 When preparing working standards, a record must be kept of the identity and amount
of all solutions and solvents employed. As for stock solutions, the solvent(s) must be appropriate
to the analyte (solubility, no chemical reactions) and method of analysis. The standards must
be labelled indelibly, allocated an expiry date and stored at low temperature in the dark in
containers that prevent any loss of solvent and entry of water. Septum closures are particularly
prone to evaporation losses (in addition to being a potential source of contamination) and
should be replaced as soon as practicable after piercing, if solutions are to be retained.
Following equilibration to room temperature, solutions must be re-mixed and a check made
to ensure that the analyte has remained in solution, especially where solubility at low
temperatures is limited.

F7 At method development or validation, or for analytes new to the laboratory, the

response detected should be shown to be due to the analyte, rather than to any impurity or
artefact. If degradation of the analyte occurs during extraction, clean-up or separation, and
the degradation product is commonly found in samples, but excluded from the residue
definition, then the results must be confirmed using an alternative technique that avoids this
problem.

Testing and replacement of standards

F8 The stability of an existing and possibly expired “reference” standard may be checked
by preparing a new stock standard and comparing the detector responses. The comparison
should be undertaken using appropriate dilutions of individual standards or mixtures of
standards. Inexplicable differences in apparent concentrations between old and new
standards must be investigated. Discrepancies between the concentrations of new and old
solutions may be due to a number of factors other than simply analyte degradation (e.g.
analyte precipitation, solvent evaporation, differences in the purities between the old and
new reference standards, errors in weighing, or errors in the instrumental analysis).

F9 The means from at least five replicate measurements for each of two solutions (old and
new) should not normally differ by more than ±10%. The mean value from the new solution is
taken to be 100% and is also used as a basis for the calculation of the percentage-difference.
Where the difference of the means exceeds ±10% from the new standard, then storage time
or conditions may have to be adjusted. Both old and new solution should be checked against
another new solution that is prepared independently from the first two.

F10 The variability of (at least 5) replicate injections (expressed as repeatability-RSDr) should
also be taken into account. Efforts towards low variability should be pursued to minimize the
uncertainty of the calculated concentration difference between the new and the old solution.
An internal standard may be used to reduce measurement variation. It is furthermore
recommended to inject the old and new standards in alternating order to reduce any bias
caused by signal drift.

F11 Where sufficient evidence exists (data from ≥2 other labs) that a certain pesticide is
stable using specified storage conditions (time, solvent, temperature etc.) then other
laboratories reproducing these storage conditions can reduce their own stability checks
accordingly. However, possible solvent evaporation must be checked gravimetrically on a
regular basis. In some cases certain additives (e.g. acids) may have to be added to stock
solutions to prevent degradation of the analytes.
G. Analytical method validation and performance criteria

Quantitative methods

G1 Within-laboratory method validation should be performed to provide evidence that a

method is fit for the intended purpose. Method validation is a requirement of accreditation
bodies, and must be supported and extended by method performance verification during
routine analysis (analytical quality control and on-going method validation). Where
practicable, all procedures (steps) that are undertaken in a method should be validated.

G2 Representative matrices may be used to validate multi-residue and single-residue

methods. As a minimum, one representative commodity from each commodity group as
described in Annex A must be validated, depending on the intended scope of the method.
When the method is applied to a wider variety of matrices, complementary validation data
should be acquired, e.g. from on-going QC during routine analyses. An example of a practical
approach to the validation procedure is presented in Appendix A.

G3 The method must be tested to assess sensitivity/linearity, mean recovery (as a measure
of trueness or bias), precision (as repeatability RSD r) and LOQ. Besides quantitative validation
aspects, also the identification parameters must be assessed e.g. ion ratio and retention time.
A minimum of 5 replicates is required (to check the recovery and precision) at the targeted
LOQ or RL of the method, and at least one other higher level, for example, 2-10x the targeted
LOQ or the MRL. Where the residue definition includes two or more analytes, then wherever
possible, the method should be validated for all analytes included in the residue definition.

G4 If the analytical method does not permit determination of recovery (for example, direct
analysis of liquid samples, SPME, or headspace analysis), then only the precision (not the
trueness) is determined from repeat analyses of calibration standards. The bias is usually
assumed to be zero, although this is not necessarily the case. In SPME and headspace analyses
the trueness and precision of calibration may depend on the extent to which the analyte has
equilibrated with respect to the sample matrix. Where methods depend upon equilibrium, this
must be demonstrated during method validation.

G5 Where results are expressed on the basis of fat content or dry weight, the method used
to determine the dry weight or fat content should be validated using a widely recognised
method. For feeding stuffs the methods listed in Appendix III of Regulation (EC) No 152/2009
are obligatory.

Method performance acceptability criteria

G6 A quantitative analytical method should be demonstrated at both initial and extended

validation stages, as being capable of providing acceptable mean recovery values at each
spiking level and for at least one representative commodity from each of the relevant
commodity groups (see Annex A and Table 4). Mean recoveries from initial validation should
be within the range 70–120%, with an associated repeatability RSDr ≤ 20%, for all analytes
within the scope of a method. In exceptional cases, mean recovery rates outside the range
of 70-120% can be accepted if they are consistent (RSD ≤ 20%) and the basis for this is well
established (e.g. due to analyte distribution in a partitioning step), but the mean recovery must
not be lower than 30 % or above 140 %. Within-laboratory reproducibility (RSDwR), which may
be determined from on-going QC-data in routine analyses, should be ≤ 20%, excluding any
contribution due to sample heterogeneity. The LOQ is the lowest spike level of the validation
meeting these method performance acceptability criteria.

G7 The validation must also be used to verify the ability of the method to identify the analyte
according to the requirements specified in section D. In justified cases, the validation data
may be used to set performance-based criteria, for individual analytes, rather than applying
the generic criterion given in Table 4.

Table 4. Validation parameters and criteria.

Cross reference
Parameter What/how Criterion to AQC
document
Sensitivity/linearity Linearity check from five levels Deviation of C14-C19
back-
calculated
concentration
from true
concentration
≤± 20 %

Matrix effect Difference of response from standard * C21-C29

in matrix extract and standard in Glossary
solvent
LOQ Lowest spike level meeting the ≤ MRL G6
identification and method
performance criteria for recovery and
precision
Specificity Response in reagent blank and blank ≤ 30 % of RL C41
control samples

Recovery Average recovery for each spike level 70-120 % G3,G6

tested
Precision (RSDr) Repeatability RSDr for each spike level ≤ 20 % G3, G6
tested
Precision (RSDwR) Within-laboratory reproducibility, ≤ 20 % G3, G6
derived from on-going method
validation / verification
Robustness Average recovery and RSDwR, derived See above G6, C39-C44
from on-going method validation /
verification
Ion ratio Check compliance with identification Table 3 Section D
requirements for MS techniques
Retention time ± 0.1 D2
min.

* in case of more than 20% signal suppression or enhancement, matrix effects need to be
addressed in calibration (C22-C30)

Screening methods

G8 For screening methods the confidence of detection of an analyte at a certain

concentration level should be established. This can be achieved using screening methods
based on the RL from the validation of a quantitative method or screening methods based on
the SDL from the validation of a qualitative method.

G9 The validation of a screening method based on an SDL can be focused on detectability.

For each commodity group (see Annex A), a basic validation should involve analysis of at least
20 samples spiked at the estimated SDL. The samples selected should represent multiple
commodities from the same commodity group, with a minimum of two samples for each
individual commodity included and will be representative for the intended scope of the
laboratory. Additional validation data can be collected from on-going AQC-data and
method performance verification during routine analysis.

Method performance acceptability criteria

G10 When the screening method is only intended to be used as a qualitative method, there
are no requirements with regard to recovery of the analytes. In order to determine the
selectivity, the possible presence of false detects should be checked using non-spiked
(preferably “blank”) samples. Provided the analytes that are tentatively detected by the
screening method are identified and confirmed by a second analysis of the sample using an
appropriate confirmatory method, there is no need for a strict criterion for the number of false
positive detects. The SDL of the qualitative screening method is the lowest level at which an
analyte has been detected (not necessarily meeting the MS-identification criteria) in at least
95% of the samples (i.e. an acceptable false-negative rate of 5%).

G11 For analytes that have not been included in the initial or on-going method validation,
the confidence level of detection at a certain residue level will not be known. Consequently
analytes outside of the scope of validation can be detected using the method, but no SDL
can be specified.

G12 When using a qualitative screening method, only analytes that have been validated can
be added to the routine scope of the laboratory.
H. Additional recommendations

Contamination

H1 Samples must be separated from each other and from other sources of potential
contamination, during transit to, and storage at the laboratory. This is particularly important
with surface residues, or with volatile analytes. Samples known, or thought, to have such
residues should be doubly sealed in polythene or nylon bags and transported and processed
separately.

H2 Volumetric equipment, such as flasks, pipettes and syringes must be cleaned

scrupulously, especially before re-use. As far as practicable, separate glassware, etc., should
be allocated to standards and sample extracts, in order to avoid cross-contamination. The use
of excessively scratched or etched glassware should be avoided. Solvents used for fumigant
residues analysis should be checked to ensure that they do not contain target analyte(s).

H3 Where an internal standard is used, unintended contamination of extracts or analyte

solutions with the internal standard, or vice versa, must be avoided.

H4 Where the analyte occurs naturally, or as a contaminant, or is produced during the

analysis (e.g. biphenyl in herbs, inorganic bromide in all commodities, sulphur from soil, or
carbon disulfide from the Brassicaceae), low-level residues from pesticide use cannot be
distinguished from background levels. Natural occurrence of these analytes must be
considered in the interpretation of results. Dithiocarbamates, precursors of carbon disulfide,
ethylenethiourea or diphenylamine can occur in certain types of rubber articles and this
source of contamination must be avoided.

Interference

H5 Equipment, containers, solvents (including water), reagents, filter aids, etc., should be
checked as sources of possible interference. Rubber and plastic items (e.g. seals, protective
gloves, and wash bottles), polishes and lubricants are frequent sources of interferences. Vial
seals should be PTFE-lined. Extracts should be kept out of contact with seals, especially after
piercing, for example, by keeping vials upright. Vial seals may have to be replaced quickly
after piercing, if re-analysis of the extracts is necessary. Analysis of reagent blanks should
identify sources of interference in the equipment or materials used.

H6 Matrix effects or matrix interferences from natural constituents of samples are frequent.
The interference may be peculiar to the determination system used, variable in occurrence
and intensity, and may be subtle in nature. If the interference takes the form of a response
overlapping that of the analyte, a different clean-up or determination system may be
required. Matrix effects in terms of suppression or enhancement of the detection system
response is dealt with in paragraph C21. If it is not practicable to eliminate matrix effects or to
compensate for such effects by matrix-matched calibration, the overall accuracy of analysis
should nonetheless comply with the criteria in paragraph G6.
Annex A. Commodity groups and representative commodities9

Vegetable and fruits, cereals and food of animal origin

Commodity Typical commodity categories Typical representative commodities

groups wthin the group within the category

1. High water Pome fruit Apples, pears

content Stone fruit Apricots, cherries, peaches,
Other fruit Bananas
Alliums Onions, leeks
Fruiting vegetables/cucurbits Tomatoes, peppers, cucumbers, melons
Brassica vegetables Cauliflowers, Brussels-sprouts, cabbages,
broccoli
Leafy vegetables and fresh herbs Lettuce, spinach, basil
Stem and stalk vegetables Celery, asparagus

Fresh legume vegetables Fresh peas with pods, peas, mange tout,
broad beans, runner beans, French beans

Fresh Fungi Champignons, chanterelles

Root and tuber vegetables Sugar beet, carrots, potatoes, sweet
potatoes
2. High acid Citrus fruit Lemons, mandarins, tangerines, oranges
content and
Small fruit and berries Strawberries, blueberries, raspberries, black
high water
currants, red currants, white currants, grapes
content10
3. High sugar Honey, dried fruit Honey, raisins, dried apricots, dried plums,
and low water fruit jams
content11
4a. High oil Tree nuts Walnuts, hazelnuts, chestnuts
content and Oil seeds Oilseed rape, sunflower, cotton-seed,
very low water soybeans, peanuts, sesame etc.
content Pastes of tree nuts and oil seeds Peanut butter, tahina, hazelnut paste
4b. High oil Oily fruits and products Olives, avocados and pastes thereof
content and
intermediate
water content
5. High starch Dry legume vegetables/pulses Field beans, dried broad beans, dried
and/or protein haricot beans (yellow, white/navy, brown,
content and speckled), lentils
low water and Cereal grain and products thereof Wheat, rye, barley and oat grains; maize,
fat content rice wholemeal bread, white bread,
crackers, breakfast cereals, pasta, flour.
6. “Difficult or Hops
unique Cocoa beans and products thereof, coffee,
commodities”12 tea
Spices

9SANCO/12574/2014

On the basis of OECD Environment, Health and safety Publications, Series on Testing and Assessment, No72 and Series of Pesticides
No39
10 If samples are pH-adjusted during the extraction step, by adding buffers or large amounts of acids or bases, then the commodity

Group 2 can be merged with commodity Group 1.

11 Where commodities of Group 3 are mixed with water prior to extraction to achieve a water content of >70%, this commodity group

may be merged with Group 1. The RLs should be adjusted to account for smaller sample portions (e.g. if 10g portions are used for
commodities of Group 1 and 5g for Group 3, the RL of Group 3 should be twice the RL of Group 1 unless a commodity belonging to
Group 3 is successfully validated at a lower level).
12
“Difficult commodities” should only be fully validated if they are frequently analysed. If they are only analysed occasionally, validation
may be reduced to just checking the reporting limits using spiked blank extracts.
 Commodity Typical commodity categories Typical representative commodities
groups wthin the group within the category

7. Meat Red muscle Beef, pork, lamb, game, horse

(muscle) and White muscle Chicken, duck, turkey
Seafood Offal Liver, kidney
Fish Cod, haddock, salmon, trout
8. Milk and milk Milk Cow, goat and buffalo milk
products Cheese Cow and goat cheese
Dairy products Yogurt, cream
9. Eggs Eggs Chicken, duck, quail and goose eggs
10. Fat from Fat from meat Kidney fat, lard
food of animal Milk fat13 Butter
origin

Feed

Commodity Typical commodity categories Typical representative commodities

groups within the group14 within the category

1. High water Forage crops Grasses, Alfalfa, Clover, Rape

content Brassica vegetables Kale/Cabbage
Leaves of root and tuber Sugar beet leaves and tops
vegetables
Root and tuber Sugar beet and fodder beet roots, carrots,
potatoes
Silage Maize, clover, grasses

By-products and food waste such as apple

pomace, tomato pomace, potato peels, flakes
and pulp, sugar beet pulp, molasses15
2. High acid By-products and food waste such as
content and high Citrus pomace 10,15
water content
3. High oil/fat Oil seeds, oil fruits, their Cottonseed, linseed, rapeseed, sesame seed,
content and very products and by products sunflower seed, seed, soybeans
low water Fat/oil of vegetable and Palm oil, rapeseed oil, soya bean oil, fish oil,
content animal origin fatty acid distillate
Compound feed with high lipid content

4. Intermediate Oil seed cake and meal Olive, rape, sunflower, cotton-seed, soybeans
oil content and cake or meal
low water
content
5. High starch Cereal grains, their products, Barley, oat, maize, rice, rye, spelt, triticale and
and/or protein by-products and food waste wheat kernels, flakes, middlings, hulls and bran.
content and low Bread, brewers’ and distillers’ grains
water and fat Cereal based composite feed
content 14 Dried beans, peas, lentils
Legume seeds Seed hulls
By-products and food waste

13 If methods to determine non-polar pesticides in commodities of Group 7 are based on extracted fat, these commodities can be
merged with Group 10.
14
Where a commodity is common to both food and feed e.g cereals, only one validation is required.
15
Sample size to water ratio must be optimised for the individual commodities, by adding water before extraction to simulate the raw
product.
 Commodity Typical commodity categories Typical representative commodities
groups within the group14 within the category

6. “Difficult or Straw Barley, oat, maize, rice, rye and wheat straw
unique Hay Grasses
commodities”12 Premixtures
By-products and food waste such as
potato protein and fatty acid distillate
7. Meat and Animal origin based Fish meal
Seafood composite feed

8. Milk and milk Milk Milk replacer

products By-products and food waste such as whey 15)
Appendix A. Method validation procedure: outline and example approaches

Validation is undertaken following the completion of the method development or before a

method that has not been previously used is to be introduced for routine analysis. We
distinguish between initial validation of a quantitative analytical method to be applied in the
laboratory for the first time and the extension of the scope of an existing validated method for
new analytes and matrices.

Quantitative analysis

1. Initial full validation

Validation needs to be performed

for all analytes within the scope of the method
for at least 1 commodity from each of the commodity groups (as far as they are within
the claimed scope of the method or as far as applicable to samples analysed in the
laboratory)

Experimental:

A typical example of the experimental set up of a validation is:

Sample set (sub-samples from 1 homogenised sample):

Reagent blank
1 blank (non-spiked) sample
5 spiked samples at target LOQ
5 spiked samples at 2-10x target LOQ

Instrumental sample sequence:

Conditioning blanks in GC
Calibration standards
Reagent blank
Blank sample
5 spiked samples at target LOQ
5 spiked samples at 2-10 x target LOQ
Calibration standards

Spiking of commodities is a critical point in validation procedures

In general the spiking procedure should reflect as much as possible the techniques used
during routine application of the method. If for example, samples are milled cryogenically and
extracted in frozen condition spiking must be done on frozen analytical test portions of blank
material and extracted immediately. Where samples are milled at room temperature and
extracted on average after 20 min, spiking should be done on blank test portions at room
temperature. In general, spiking of samples will not simulate incurred residues even if the spiked
sample is left standing for a certain time. To study the relative extractability of incurred residues
agriculturally treated samples should be taken.

Data evaluation:
Inject the sample sequence, calibrate and quantify as is described in this AQC document.

Evaluate the parameters from Table 4 and verify them against the criteria.
2. Extension of the scope of the method: new analytes

New analytes that are to be added to a previously validated method need to be validated
using the same procedure as outlined above for initial validation.

Alternatively, the validation of new analytes can be integrated in the on-going quality control
procedure. As an example: with each batch of routine samples, one or more commodities
from the applicable commodity category are spiked at the LOQ and one other higher level.
Determine the recovery and occurrence of any interference in the corresponding unspiked
sample. When for both levels, 5 recovery values have been collected, the average recovery
and within-laboratory reproducibility (RSDwR) can be determined and tested against the
criteria in Table 4.

3. Extension of the scope of the method: new matrices

A pragmatic way of validation of the applicability of the method to other matrices from the
same commodity group is to perform using the on-going quality control performed
concurrently with analysis of the samples (see below).

4. On going validation / performance verification

The purpose of on-going method validation is to:

- demonstrate robustness through evaluation of mean recovery and within-laboratory
reproducibility (RSDwR)
- demonstrate that minor adjustments made to the method over time do not
unacceptably affect method performance
- demonstrate applicability to other commodities from the same commodity category
(see also Annex 1)
- determine acceptable limits for individual recovery results during routine analysis
Experimental:

Typically, with each batch of samples routinely analysed, one or more samples of different
commodities from the applicable commodity category are spiked with the analytes and
analysed concurrently with the samples.

Data evaluation:

Determine for each analyte the recovery from the spiked sample and occurrence of any
interference in the corresponding unspiked sample. Periodically (e.g. annually) determine the
average recovery and reproducibility (RSDwR) and verify the data obtained against the criteria
from Table 4. These data can also be used to set or update limits for acceptability of individual
recovery determinations as outlined in paragraph G6 of the AQC document and estimation
of the measurement uncertainty.

Identification criteria: retention time (see D2), MS criteria (see Table 3 and D12).
 INITIAL VALIDATION PLAN FOR QUANTITATIVE METHODS

Validation protocol

1. Define the scope of the method (pesticides,

matrices)

2. Define the validation parameters and acceptance criteria (see

Table 5)

3. Define validation experiments

4. Perform full internal validation

experiments

5. Calculation and evaluation of the data obtained from the validation

experiments

6. Document validation experiments and results in the validation report

Define criteria for revalidation
Define type and frequency of analytical quality control (AQC)
checks for the routine
Appendix B. Examples of conversion factors.

The MRL residue definitions for a number of pesticides include not only the parent pesticide,
but also its metabolites or other transformation products.

In Example 1, the sum of the components is expressed as fenthion, following adjustment for the
different molecular weights (conversion factors). In Example 2, the sum of (E)-metaflumizone
and (Z)-metaflumizone is expressed as their arithmetic sum (metaflumizone).

The following examples illustrate the two different types of summing that are required in order
to meet the requirements of the residue definition.

Example 1.
Fenthion, its sulfoxide and sulfone, and their oxygen analogues (oxons), all appear in the
residue definition and all should be included in the analysis.

Example of calculating the conversion factor (Cf)

CFenthionSO to Fenthion = (MwFenthion/MwFenthionSO) x CFenthion SO = (278.3/294.3) x CFenthion SO= 0.946 x CFenthionSO

Compound Mw Cf
Fenthion RR´S P=S 278,3 1,00
Fenthion sulfoxide RR´SO P=S 294,3 0,946
Fenthion sulfone RR´SO2 P=S 310,3 0,897

Fenthion oxon RR´S P=O 262,3 1,06

Fenthion oxon sulfoxide RR´SO P=O 278,3 1,00
Fenthion oxon sulfone R´SO2 P=O 294,3 0,946

Residue Definition: Fenthion (fenthion and its oxygen analogue, their sulfoxides and sulfones
expressed as parent)

Where the residue is defined as the sum of the parent and transformation products, the
concentrations of the transformation products should be adjusted according to their
molecular weight being added to the total residue concentration.

CFenthionSum = 1.00 x CFenthion + 0.946 x CFenthion SO + 0.897 xCFenthion SO2 +1.06 x CFenthionoxon
+ 1.00x CFenthionoxon SO + 0.946 x CFenthionoxon SO2
Example 2.

Residue Definition: Metaflumizone (sum of E- and Z- isomers))

C Metaflumizone = 1.00 x C (E)-Metaflumizone +1.00 x C (Z)-Metaflumizone

Appendix C. Examples for the estimation of measurement uncertainty of results

Establishment of the measurement uncertainty (MU) is a requirement under ISO/IEC 17025 (E5).
It is also required to demonstrate that the laboratory's own MU is not exceeding the 50% default
value used by regulatory authorities in cases of enforcement decisions (E10).
In order to estimate the MU of results for the determination of pesticide residues, several
documents are recommended to be read that help to provide a better understanding of this
topic, such as Eurachem,16 Nordtest,17 Eurolab,18 Codex CAC/GL 59-200619 Guidelines and A.
Valverde et al.20
In this appendix two appraoches for estimation of MU are described and example calculations
provided. The first one of them deals with MU estimation based on intra-laboratory QC data
for individual pesticides in a commodity group. The second one deals with an approach that
derives a generic MU for the laboratory's multi-residue methods based on an overall
combination of intra-laboratory precision and PT-derived bias.
In the examples only within-laboratory variability and bias are considered as these are typically
the main contributors. However, other factors, such as heterogeneity of the laboratory sample
and the tolerance in differences of standard solutions (F9) may contribute to the overall MU.
Contributions are significant when their uncertainty is greater than one third of the magnitude
of the largest contributer.
In both examples, an expanded coverage factor of k = 2 is assumed to calculate the
expanded MU represented by U' from the relative standard uncertainty u' in equation 1.
U’ = k u’ Equation 1

Approach 1. Estimating MU based on intra-laboratory validation/QC data.

Here estimation is based on16,17,19:

𝑢′ = √𝑢′(𝑏𝑖𝑎𝑠)2 + 𝑢′(𝑝𝑟𝑒𝑐𝑖𝑠𝑖𝑜𝑛)2 Equation 2

with u' = measurement uncertaintly
u'(bias) = uncertainty component for the bias
u'(precision) = uncertainty component for the precision

In principle, the precision component should be estimated from experiments different than
those used to estimate the bias component, and the latter should preferably be based on an
external (independent) source such as CRM and PT reference values. The reality is that for the
majority of the pesticide/matrix combinations only data from internal QC samples (spiked
samples) are available and that bias and precision components can only be estimated from
the same (on-going) validation experiments.

16 EURACHEM/CITAC Guide, Quantifying uncertainty in analytical measurement, 3rd Edition, 2012,

http://www.eurachem.org/images/stories/guides/pdf/QUAM2012_P1.pdf
17 NORDTEST NT TR 537 edition 4 2017:11

http://www.nordtest.info/images/documents/nt-technical-
reports/NT_TR_537_edition4_English_Handbook_for_calculation_of_measurement_uncertainty_in_environmental_laboratories.pdf
18 EUROLAB Technical Report 1/2007: Measurement uncertainty revised: alternative approaches to uncertainty evaluation, European

Federation of National Associations of Measurement, Testing and Analytical Laboratories, www.eurolab.org, Paris, 2007
19 Codex Alimentarius Commission ,CAC/GL 59-2006 (Amendment 1-2011) Guidelines on Estimation of Uncertainty of Results,

www.codexalimentarius.net/download/standards/10692/cxg_059e.pdf , Rome 2006 and 2011

20
A. Valverde, A. Aguilera, A. Valverde-Monterreal, Practical and valid guidelines for realistic estimation of measurement
uncertainty in multi-residue analysis of pesticides, Food Control 71 (2017) 1-9.
A first estimate of u´(bias) and u´(precision) is usually obtained at the initial validation stage for
each pesticide/representative matrix/level combination. However, a much more realistic
estimation is calculated for each pesticide from a number (usually, ≥10) of long-term QC tests
(spiked samples) for each pesticide for one or more matrices of the same commodity group.
Estimation of the u'(bias) component without correction for recovery
The bias is the difference between the measured value and the true value. In absence of CRM
or PT assigned values, the true value is the spiked concentration, and the bias is the difference
between the spiked and the measured concentration. The relative bias is given by:
𝑚𝑒𝑎𝑠𝑢𝑟𝑒𝑑 𝑐𝑜𝑛𝑐𝑒𝑛𝑡𝑟𝑎𝑡𝑖𝑜𝑛−𝑠𝑝𝑖𝑘𝑒𝑑 𝑐𝑜𝑛𝑐𝑒𝑛𝑡𝑟𝑎𝑡𝑖𝑜𝑛
𝑟𝑒𝑙𝑎𝑡𝑖𝑣𝑒 𝑏𝑖𝑎𝑠 = × 100% Equation 3
𝑠𝑝𝑖𝑘𝑒𝑑 𝑐𝑜𝑛𝑐𝑒𝑛𝑡𝑟𝑎𝑡𝑖𝑜𝑛

u'(bias) can be calculated using the following equation:

𝑢′(𝑏𝑖𝑎𝑠) = √𝑅𝑀𝑆′(𝑏𝑖𝑎𝑠)2 + 𝑢′(𝐶𝑟𝑒𝑓)2 Equation 4

∑ 𝑏𝑖𝑎𝑠𝑖2
with RMS'(bias) = root mean square of the relative bias =√ = √𝑚𝑒𝑎𝑛𝑏𝑖𝑎𝑠
2 2
+ 𝑆𝐷. 𝑃𝑏𝑖𝑎𝑠
𝑁

with meanbias = the mean of the relative bias

SD.Pbias = the population standard deviation of the relative bias (stdev.p in Excel)
u'(Cref) = uncertainty of the spiked concentration.
When certified analytical standards and calibrated/verified volumetric material/balances are
used to prepare the spiked samples, it can be assumed that the uncertainty associated with
the spiking level is negligible. Equation 4 then simplifies to:

2
𝑢′(𝑏𝑖𝑎𝑠) = √𝑚𝑒𝑎𝑛𝑏𝑖𝑎𝑠 2
+ 𝑆𝐷. 𝑃𝑏𝑖𝑎𝑠 Equation 5

Estimation of the u'(bias) component with correction for recovery

In case the analysis result is mathematically corrected for recovery using a recovery factor
(see E4), then the u'(bias) can be calculated using the following equation:
𝑅𝑆𝐷 2
𝑢′ (𝑏𝑖𝑎𝑠) = √( 𝑤𝑅 ) + 𝑢′(𝐶𝑟𝑒𝑓)2 Equation 6
√𝑁

with RSDwR = within-laboratory reproducibility of the recovery

N = number of recovery tests
When certified analytical standards and calibrated/verified volumetric material/balances are
used to prepare the spiked samples, it can be assumed that the uncertainty associated with
the spiking level is negligible. Equation 6 then simplifies to:

𝑅𝑆𝐷𝑟𝑊
𝑢′ (𝑏𝑖𝑎𝑠) = Equation 7
√𝑁
Estimation of the u'(precision) component
As precision component the within-laboratory reproducibility (RSDrW) of the pesticide is used:
u'(precision) = RSDrW Equation 8
The RSDrW is preferably derived from spiked samples from ≥10 sample batches over a longer
period of time (on-going validation). When multiple matrices from a commodity group are
analysed and one RSDrW value is used for that group, the RSDrW should be based on spiked
samples of different matrices reflecting the scope of analysis in order to obtain a realistic
estimate for the commodity group. It is recommended to periodically re-assess the RSDrW, e.g.
every year, or in case of low method application frequency every 20 results, and to consider
updating of the RSDrW (either using the entire data set, or only the more recent data).
If on-going validation data are not (yet) available, repeatability data from initial validation
may be used. Note that especially when this represents only one matrix analysed on a single
day, this is likely to result in an underestimation of the precision component.

Estimation of the combined measurement uncertainty

The combined measurement uncertainty is estimated by equation 2, and using equation 5
and 8 is:
𝑢′ = √𝑚𝑒𝑎𝑛𝑏𝑖𝑎𝑠
2 2
+ 𝑆𝐷. 𝑃𝑏𝑖𝑎𝑠 2
+ 𝑅𝑆𝐷𝑟𝑊 Equation 9

When analysis results are mathematically corrected for recovery using a recovery factor, the
combined measurement uncertainty is estimated by equation 2, using equation 7 and 8:
𝑅𝑆𝐷 2
𝑢′ = √( 𝑤𝑅 ) + 𝑅𝑆𝐷𝑟𝑊
2
Equation 10
√𝑁

Note: when N≥9, u' is approximately RSD rW2

Example calculations.
Example A. This example applies to all situations where results are not corrected for recovery.
A laboratory analyses pesticide X in fruit and vegetables (commodity group 1, Annex A). With
each batch of samples, a sample spiked at 0.050 mg/kg is included in the batch. A different
matrix is chosen each time to take the variability of matrices from this commodity group into
account. In the example, the measurement uncertainty is based on the QC data obtained
after nine batches of analysis (Table I).

Table I. Example A, pesticide X (low bias, good within-lab reproducibility)

measured rel. bias (%)
Date
QC samples spiked @0.05 mg/kg (mg/kg) [equation 3]
10/Jan Apple 0.051 2
26/Jan Pear 0.045 -10
04/Feb Lettuce 0.050 0
08/Feb cauliflower 0.056 12
22/Feb Cherries 0.052 4
28/Feb Onion 0.046 -8
05/Mar French beans 0.048 -4
06/Mar Carrots 0.045 -10
22/Mar Leek 0.037 -26
N 9
mean 0.0478 -4.44
 SD.Pbias (stdev.p) (%) 10.232
standard dev. measured (mg/kg)
(stdev.s) 0.00543
RSDwR (%) 11.357
u'(bias) (%) [equation 5] 11.1555
u'(precision) = RSDwR (%) [equation 8] 11.357
u' combined (%) [equation 2 and 9] 15.920
U' (expanded MU) (%) [equation 1] 31.839

The estimated expanded measurement uncertainty is 32%. For pesticide X the laboratory has
demonstrated that the expanded MU is not exceeding the 50% default value (E14). The
regulatory authorities can use the 50% default value for enforcement decisions.

Example B. This example is similar to example B, but for this pesticide a relatively high bias is
observed. As can be seen from the calculation in Table II, while the RSD rW is the same as in
example A, the higher bias results in an expanded MU of 63%.

Table II. Example B, pesticide Y (high bias, good within-lab reproducibility)

measured
Date QC sample spiked @0.05 mg/kg (mg/kg) rel. bias (%)

10/Jan Apple 0.038 -24

26/Jan Pear 0.034 -32
04/Feb Lettuce 0.037 -26
08/Feb cauliflower 0.042 -16
22/Feb Cherries 0.039 -22
28/Feb Onion 0.034 -32
05/Mar French beans 0.036 -28
06/Mar Carrots 0.034 -32
22/Mar Leek 0.028 -44
N 9
Mean 0.0358 -28.4
SD.Pbias (stdev.p) (%) 7.470
standard dev. measured (mg/kg)
(stdev.s) 0.00396
RSDwR (%) 11.073
u'(bias) (%) [equation 5] 29.4090
u'(precision) = RSDwR (%) [equation 8] 11.073
u' combined (%) [equation 2 and 9] 31.424
U' (expanded MU) (%) [equation 1] 62.849

For pesticide, Y the laboratory has demonstrated that the expanded MU is exceeding the 50%
default value (E14) when results are not corrected for recovery. If, at the end of the analytical
program, the results were corrected for the average recovery achieved over the 3 month
period, then the u'(bias) need only to reflect the uncertainty associated with the mean
recovery19 and equation 7 applies. The average recovery in example B is [100%-bias%]=71.6%.
The RSDrW of this recovery is the same as the RSDrW of the measured concentrations (11.073%).
With that, the u'(bias) according to equation 7 is 3.691%, resulting in a combined u' of 11.672%
and an expanded MU of 23%.

Approach 2. Estimating a generic MU using PT data.

It is recognised that for multi-residue methods applied to a wide range of matrices, calculation
of individual MUs may not always be possible because it requires substantial efforts and bias
data may not be available for all pesticides in a sufficient number of matrices. As an alternative
to approach 1, the expanded MU may be calculated using the within-laboratory
reproducibility relative standard deviation combined with estimates of the method and the
laboratory bias using PT data applying equation 11.
2 2
u' u' RSDwR u' bias Equation 11

In equation 12:
u´ is the combined standard uncertainty
u´(RSDwR) is the within-laboratory reproducibility
u´(bias) is the uncertainty component arising from method and laboratory bias,
estimated from PT data.
To calculate u´(RSDwR) preferably long-term quality control (QC) recovery data should be used
although recoveries coming from validation data can be included too.
Note: within-laboratory variability coming from calibration is considered to be included in the
long-term quality control recovery variability15.
The standard deviation of all the recoveries percentage taken into account is calculated.
For the example presented here, validation recoveries are taken for all pesticides that have
been validated in the same multi residue method (MRM) and for which the laboratory is used
to take part in the PTs. Also the long-term QC recovery data in the range of 60%-140% are
included for two different levels and for the fruit and vegetables matrices normally analysed
in the laboratory. A minimum of 31 results must be taken into account 18. For two methods: one
for LC with 93 pesticides and the other for GC with 66 pesticides, the standard deviation of all
the recovery percentages is 0.15. The u´(RSDwR) is therefore 0.15.
The u´(bias) component is calculated from the performance of the laboratory in PT studies as
stated in many guidelines15-18. Participation of EU official laboratories in the EUPTs is mandatory.
Therefore taking results from at least 2 EUPT-FV will provide enough data (above 31 results) to
conduct this approach.
For this example, the 2 EUPT-FV results reported are in total 39 pesticide results. From these two
PTs the information that needs to be used is the assigned value or median, the real dispersion
of results reported by the laboratories for each of the pesticides present in the sample (the Qn
or robust standard deviation) and the number of laboratories reporting quantitative results for
those pesticides.
Table I shows the number of the EUPT-FV wherein the lab has participated (column A), the
pesticides reported (column B), the pesticide concentration reported (column C), the
assigned value or median (column D), the square of the bias (column E) which is [(column C –
column D) / (column D)]2, then the dispersion of the data from the participants or Qn (column
F), then the number of laboratories reporting results for each of the pesticides (column G), then
the square root of column G (column H) and then the coefficient between column F and
column H (column I).
Then equation 12 is used:
2 2
u' RMS'bias u' cref Equation 12

Where:
 RMS´bias is the Root Mean Square of the sum of the squared bias [(sum of column E) divided
by the number of results taken from the PTs (m =39)] as indicated in equation 13.
2
bias i' 1.999
RMS 'bias 0.2263
m 39 Equation 13

u´(Cref) is an estimation of an average over several PTs. It is calculated as the sum of the
Qn divided by the square root of the number of results reported by the laboratories for
each of the pesticides in the scope (column I), then divided by the number of results (m)
taken from the PTs (39) and multiplied by a factor of 1.253 according to ISO 1352821. This
ISO states that u´(Cref) must be multiplied by this factor, whenever the assigned value in PTs
is the median. Is calculated following equation 14.
Qn
i
No. 0.9326
u ' c ref 1.253 1.253 0.02996 Equation 14
m 39
When entering the results from equation 13 and 14 into equation 12, we get the u´(bias):

' 2 2
u ' bias RMSbias u ' cref 0.22632 0.029962 0.2284
Note: the u´(bias) can be calculated from the participation of the laboratory in other PTs.
Now, back to equation 11 and entering the u´(RSDwR) = 0.15 and the u´(bias):

2 2
u' u ' RSDwR u ' bias 0.15 2 0.2284 2 0.2732

So back to equation 1, u´ = 0.27 and the expanded measurement uncertainty is therefore:

U’ = k u’ = 2 0.273 = 0.546 U’=54,6%

20 ISO 13528: Statistical methods for use in proficiency testing by interlaboratory comparisons, International Standardisation Organisation
Table I

A B C D E F G H I

PT Qn
Lab No.
EUPT-FV Pesticides
Results
Assigned (bias´i)2 Qn
Results
No.
Values No.
Acetamiprid 0.337 0.419 0.0383 0.18 85 9.220 0.020
Boscalid 0.139 0.238 0.1720 0.22 74 8.602 0.026
Chlorpyrifos-methyl 0.056 0.078 0.0796 0.26 126 11.225 0.023
Diazinon 0.412 0.603 0.1003 0.24 125 11.180 0.021
Endosulfan Sulphate 0.062 0.102 0.1538 0.29 110 10.488 0.028
Hexythiazox 0.396 0.509 0.0493 0.29 80 8.944 0.032
Isofenphos-methyl 0.436 0.499 0.0159 0.17 69 8.307 0.020
Kresoxim-methyl 0.028 0.050 0.1936 0.22 113 10.630 0.021
EUPT-FV-10 Malathion 0.697 0.771 0.0091 0.32 124 11.136 0.029
Carrot Methamidophos 0.245 0.342 0.0798 0.37 103 10.149 0.036
Methiocarb 0.096 0.157 0.1510 0.31 65 8.062 0.038
Methomyl 0.538 0.739 0.0740 0.22 88 9.381 0.023
Oxamyl 0.274 0.322 0.0222 0.19 84 9.165 0.021
Pendimethalin 0.056 0.074 0.0592 0.21 96 9.798 0.021
Phosmet 0.139 0.236 0.1689 0.28 95 9.747 0.029
Quinoxyfen 0.244 0.298 0.0328 0.23 95 9.747 0.024
Triadimenol 0.265 0.331 0.0398 0.27 103 10.149 0.027
Vinclozolin 0.90 1.04 0.0181 0.24 124 11.136 0.022
Aldicarb 0.679 0.658 0.0010 0.20 91 9.539 0.021
Azinphos-methyl 0.349 0.355 0.0003 0.28 128 11.314 0.025
Boscalid 0.373 0.414 0.0098 0.25 102 10.100 0.025
Buprofezin 0.453 0.638 0.0841 0.30 118 10.863 0.028
Cadusafos 0.810 0.611 0.1061 0.24 76 8.718 0.028
Carbofuran 0.245 0.283 0.0180 0.20 107 10.344 0.019
Deltamethrin 0.138 0.157 0.0146 0.25 130 11.402 0.022
Diazinon 1.140 1.25 0.0077 0.26 144 12.000 0.022
Isofenphos-methyl 0.498 0.54 0.0060 0.24 86 9.274 0.026
Lambda-cyhalothrin 0.211 0.266 0.0428 0.24 138 11.747 0.020
EUPT-FV-11
Metalaxyl 0.445 0.45 0.0001 0.21 122 11.045 0.019
Cauliflower
Methamidophos 0.341 0.4045 0.0246 0.33 109 10.440 0.032
Methidathion 0.453 0.472 0.0016 0.24 136 11.662 0.021
Methomyl 0.190 0.277 0.0986 0.18 84 9.165 0.020
Monocrotophos 0.322 0.4375 0.0697 0.21 95 9.747 0.022
Oxamyl 0.230 0.2485 0.0055 0.17 89 9.434 0.018
Parathion-methyl 0.277 0.32 0.0181 0.24 129 11.358 0.021
Phosalone 0.383 0.368 0.0017 0.30 136 11.662 0.026
Procymidone 0.750 0.78 0.0015 0.20 136 11.662 0.017
Thiacloprid 0.961 0.879 0.0087 0.15 82 9.055 0.017
Triazophos 0.612 0.538 0.0189 0.30 132 11.489 0.026

2 Qn
biasi' 1.999 0.9326
No.
No. of Results (m) 39 No. of Results (m) 39
Appendix D. Example of rounding, reporting and interpreting results

Rounding:
The following general rules are proposed for rounding the result of a pesticide residue
concentration:
a) The result should be rounded to either two significant figures for results < 10 mg/kg or
three significant figures for results ≥ 10 mg/kg (see paragraph E6).
b) If the digit following the digit to be rounded in the primary result is 0, 1, 2, 3 or 4, the
digit will not change when the rounding is applied.
c) If the digit following the digit to be rounded in the primary result is 5, 6, 7, 8 or 9, the
digit will increase by one unit when the rounding is applied.
d) The expanded measurement uncertainty will be estimated by using the final rounded
result.
e) The value of the expanded uncertainty is always rounded up unless (after rounding of
the second non-retained digit) the first non-retained digit would be 0. The value of
the expanded uncertainty should be given with the same number of decimals as the
rounded result.
1) NIST GLP 9; Good Laboratory Practice for Rounding Expanded Uncertainties and Calibration Values;
(https://www.nist.gov/system/files/documents/2019/05/14/glp-9-rounding-20190506.pdf)
2) EUROPEAN COMMISSION, DIRECTORATE GENERAL, JOINT RESEARCH CENTRE Directorate F – Health,
Consumers and Reference Materials, PR-D-00014: Property value assignment
3) German Standard: DIN 1333:1992

Example:
Primary result = 0.02454705 mg/kg
This result should be rounded to two significant figures (0.02454705)
Result after rounding = 0.025 mg/kg (Final result; two significant figures)
Primary value for the Expanded Uncertainty (50% criteria) = 0.025/2 = 0.0125 mg/kg
Rounded value of the Expanded Uncertainty = 0.013 mg/kg
REPORTED RESULT = 0.025 mg/kg ± 0.013 mg/kg (k = 2; 95%)

Examples for Rounding and Interpreting results:

In the following table , examples are given for rounding and interpreting results. In the
columns Primary result and Primary value for the Expanded Uncertainty the digit to be
rounded is marked bold. Interpretation of the results is according E14 where is given that a
sample is considered non-compliant if x-U > MRL.
 Table 1 Examples for rounding and interpreting results.

No. Primary Rounded Primary value Rounded Reported Result plus Result minus MRL Interpretation
result result for the value of the result Expanded Expanded
Expanded Expanded Uncertainty Uncertainty
Uncertainty Uncertainty

mg/kg mg/kg mg/kg mg/kg mg/kg mg/kg] mg/kg mg/kg

1 0.05597 0.056 ± 0.028 ± 0.028 0.056 ± 0.028 0.084 0.028 0.1 Result plus
expanded
uncertainty
<MRL;

Compliant
2 0.07843 0.078 ± 0.039 ± 0.039 0.078 ± 0.039 0.117 0.039 0.1 Result < MRL;

Compliant
3 0.1943 0.19 ± 0.095 ± 0.10 0.19 ± 0.10 0.29 0.09 0.1 Result> MRL;

Compliant due
to the
uncertainty
interval

4 0.2134 0.21 ± 0.105 ± 0.11 0.21 ± 0.11 0.32 0.10 0.1 Result > MRL;

Compliant due
to the
uncertainty
interval

5 0.2168 0.22 ± 0.110 ± 0.11 0.22 ± 0.11 0.33 0.11 0.1 Result minus
expanded
uncertainty >MRL
;
Non-compliant

Reported results with respect to their uncertainties:

Appendix E. An overview of the options to account for method bias and use of
recovery correction factors

Table 1. Analytical procedures to reduce method bias

Reduces bias due to

Option Procedure losses during cleanup injection matrix cross
the losses errors effects reference
extraction
1. Matrix- calibration standards prepared in no no no yes C21-C23
matched extract of blank sample of the
calibration same matrix
2. Procedural calibration standards prepared in yes [1] yes no yes C28
calibration sub-portions of blank sample of
the same matrix, analyte added
before extraction
3. Use of a. Internal standard added to the possibly possibly possibly possibly C32-C34
internal calibration standards, and to [1,2] [2] [2] [2]
standard (IS) each sample before extraction
(other than (procedural internal standard)
the isotopic b. Internal standard added to the no possibly possibly possibly C32-C34
analogue of raw extract before cleanup [2] [2] [2]
the analyte) (procedural internal standard)
c. Internal standard added to the no no possibly possibly C32-C34
calibration standards, and to the [3] [2]
final extract of each sample
(injection internal standard)
4. Use of a. isotope analogue added to the yes [1] yes yes yes C35-C37
isotopically calibration standards, and to
labeled each sample before extraction
internal b. Isotope analogue added to the no yes yes yes C35-C37
standard raw extract before cleanup
(ILIS) [4] c. isotope analogue added to the no no yes yes C35-C37
calibration standards, and to the
final extract of each sample
5. Standard a. Sample standard addition: yes [1] yes no yes C24
addition analyte standard added to test-
method portions of each sample before
extraction
b. Extract standard addition: no no no yes C25
analyte standards added to
aliquots of the final extract of
each sample

[1] applies to spiked samples. May not compensate for incomplete extraction of incurred residues.
[2] an internal standard other than the isotopic analogue only reliably reduces bias when its properties and
analytical behaviour are highly similar to the analyte of interest (C33).
[3] only when the internal standard is stable and not prone to matrix effects (C33), or when the matrix effect for
the analyte in sample extract and calibrant are the same.
[4] the ILIS here is considered to be the analogue of the analyte.

Note: only the analytical procedures 2, 3a (possibly), 4a, and 5a can fully account for
method bias. In all other cases one or more sources of bias have not been addressed, and
correction for remaining method bias may be needed (see Table 2).
Table 2. Options to correct method bias (mathematically, recovery correction)

Corrects for bias due to

Option Procedure losses cleanup injection matrix cross
during the losses errors effects reference
extraction
Recovery mathematical correction for yes [2] yes no na [3] E4
correction recovery = result obtained *
100%/recovery% [1]
Recovery used for What/how Pros Cons
correction
1. Average recovery Take the average recovery Correction based on Especially for labs with
from of spiked samples multiple recoveries. limited sample numbers
on-going validation concurrently analysed with Reflects variation in time. and/or high variability in
the samples over a longer Representative for matrices sample matrices:
period of time. Different within commodity group. Data may not be available,
concentrations and Reflects multiple or not for all commodity
matrices from one concentrations. groups.
commodity group can be
combined when analyte
behaviour is similar.
2. Average recovery Take the average recovery Correction based on Single time point, does not
from across different multiple recoveries. reflect variation in time.
initial validation concentrations. In case Reflects multiple Only one (or few) matrices
validation is done for more concentrations. of the commodity group
than one matrix from the May reflect several matrices covered. Might not be fully
commodity group and from a commodity group. up-to-date and
analyte behaviour is similar, representative for all
the average of all data can matrices.
be taken.
3. Recovery included Take the recovery obtained If the spiked matrix is the Correction is based on a
in the batch from the spiked sample same as the sample(s): single recovery value which
concurrently analysed with could better reflect may be less reliable than an
the samples. recovery for that matrix (at average from (on-going)
Optionally multiple that moment) in case the validation.
recoveries can be included matrix/method behaves When the batch contains
(concentrations and/or differently from the multiple matrices: only valid
matrices for commodity situtation in initial or on- when matrix is
group), then the average going validation. representative for all
can be taken. matrices analysed.

[1] recovery as defined in glossary. Recovery used for correction: either the average from initial validation, the
average from on-going validation, or the batch recovery. The most appropriate option depends on available
data in the lab, see E4.
[2] applies to spiked samples. May not compensate for incomplete extraction of incurred residues.
[3] na = not applicable (in the definition of recovery used in the glossary, the matrix effects (if significant) are
taken into account in determination of the recovery value).

Note: in lack of a reliable recovery factor for correction, approaches 2, 3a (possibly), 4a, and
5a from Table 1 could be used to account for method bias.
Appendix F. Glossary

Accuracy Closeness of agreement between an analytical result and

the true or accepted reference value. When applied to a set
of results, it involves a combination of random error
(estimated as precision) and a common systematic error
(trueness or bias) (ISO 5725-1).
Adduct ion Ion formed by the interaction of a precursor ion with one or
more atoms or molecules to form an ion containing all the
constituent atoms of the precursor ion as well as the
additional atoms from the associated atoms or molecules.
Analyte The chemical species for which the concentration (or mass)
is to be determined. For the purposes of these procedures: a
pesticide or a metabolite, breakdown product or derivative
of a pesticide or an internal standard.
AQC Analytical quality control. Measurement and recording
requirements intended to demonstrate the performance of
the analytical method in routine practice. The data
supplement those generated at method validation. AQC
data may be used to validate the extension of methods to
new analytes. new matrices and new levels. Synonymous
with the terms internal quality control (IQC) and performance
verification. Concurrent AQC data are those generated
during analysis of the batch in which the particular sample is
included.
Batch (analysis) For extraction, clean-up and similar processes a batch is a
series of samples dealt with by an analyst (or team of
analysts) in parallel, usually in one day, and should
incorporate at least one recovery determination. For the
determination system, a batch is a series undertaken without
a significant time break and which incorporates all relevant
calibration determinations (also referred to as an “analysis
sequence”, a “chromatography sequence”, etc.). A
determination batch may incorporate more than one
extraction batch.
This document does not refer to “batch” in the IUPAC or
Codex sense, which relates to manufacturing or agricultural
production batches.
Bias The difference between the (mean) measured value and the
true value.
Blank (i) Material (a sample, or a portion or extract of a sample)
known not to contain detectable levels of the analyte(s)
sought. Also known as a matrix blank.
(ii) A complete analysis conducted using the solvents and
reagents only; in the absence of any sample (water may
be substituted for the sample, to make the analysis
realistic). Also known as a reagent blank or procedural
blank.
Bracketing calibration Organisation of a batch of determinations such that the
detection system is calibrated immediately before and after
the analysis of the samples. For example, calibrant 1,
calibrant 2, sample 1, sample n, calibrant 1, calibrant 2.
Calibration Determination of the relationship between the observed
signal (response produced by the detection system) from the
target analyte in the sample extract and known quantities of
the analyte prepared as standard solutions. In the present
document, calibration does not refer to calibration of
weighing and volumetric equipment, mass calibration of
mass spectrometers, and so on.
Calibration standard A solution (or other dilution) of the analyte (and internal
standard, if used) used for calibration of the determination
system. May be prepared from a working standard and may
be matrix-matched.
Certified reference See reference material.
material (CRM)
CI Chemical ionisation for GC-MS(/MS)
Comminution The process of reducing a solid sample to smaller fragments
by blending, crushing, pulverising, grinding, etc.
Confirmation Confirmation is the combination of two or more analyses that
are in agreement with each other (ideally, using methods of
orthogonal selectivity), at least one of which meets
identification criteria.

It is impossible to confirm the complete absence of residues.

Adoption of an ”RL” at the LCL avoids the unjustifiably high
cost of confirming the presence or absence of residues at
unnecessarily low levels.
The nature and extent of confirmation required for a positive
result depends upon importance of the result and the
frequency with which similar residues are found.
Assays based on an ECD tend to demand confirmation.
because of their lack of specificity.
Mass spectrometric techniques are often the most practical
and the least equivocal approach to confirmation.
AQC procedures for confirmation should be rigorous.
Contamination Unintended introduction of a target analyte into a sample.
extract, internal standard solution etc., by any route and at
any stage during sampling or analysis.
Determination/detection Any system used to detect and determine the concentration
system or mass of the analyte. For example, GC-MS(/MS) , GC-FPD,
LC-MS/MS, LC-ToF, etc.
Deviation of back- Deviation of calculated concentration of the calibration
calculated standards by the calibration function from the true
concentration concentrations
Deviation of back-calculated concentration (%)= (Cmeasured
– Ctrue)x100/Ctrue
ECD Electron-capture detector.
EI Electron ionisation.
EU European Union.
False negative A result wrongly indicating that the analyte concentration
does not exceed a specified value.
False positive A result wrongly indicating that the analyte concentration
exceeds a specified value.
FPD & PFPD Flame-photometric detector and pulsed flame photometric
detector (may be specific to sulphur or phosphorus
detection).
Fragment ion Product ion that results from the dissociation of a precursor
ion.
GC Gas chromatography.
Identification Is a qualitative result from a method capable of providing
structural information (e.g. using mass spectrometric (MS)
detection) that meets acceptable criteria for the purpose of
the analysis.

The process of generating of sufficient evidence to ensure

that a result for a specific sample is valid. Analytes must be
identified correctly in order to be quantified.
AQC procedures for identification should be rigorous.
Interference A positive or negative response produced by a compound(s)
other than the analyte, contributing to the response
measured for the analyte. or making integration of the
analyte response less certain or accurate. Interference is also
loosely referred to as “chemical noise” (as distinct from
electronic noise, “flame noise”, etc.). Matrix effects are a
subtle form of interference. Some forms of interference may
be minimised by greater selectivity of the detector. If
interference cannot be eliminated or compensated, its
effects may be acceptable if there is no significant impact
on accuracy.
Internal quality control See AQC.
(IQC)
Internal standards Definitions are given in the main body of text (C31-C37)
Laboratory sample The sample sent to and received by the laboratory.
LC Liquid chromatography (primarily high performance liquid
chromatography, HPLC, and Ultra high performance liquid
chromatography, UPLC).
LCL Lowest calibrated level. The lowest concentration (or mass)
of analyte with which the determination system is successfully
calibrated, throughout the analysis batch. (See also
“reporting limit”).
LC-MS/MS Liquid chromatographic separation coupled with tandem
mass spectrometric detection.
Level In this document, refers to concentration (e.g. mg/kg, µg/ml)
or quantity (e.g. ng, pg).
 LOD Limit of determination (LOD) means the validated lowest
(as referred to in Reg. residue concentration which can be quantified and reported
396/2005) by routine monitoring with validated control methods; in this
respect it can be regarded as the LOQ (see below).
LOQ Limit of quantitation (quantification). The lowest
concentration or mass of the analyte that has been
validated with acceptable accuracy by applying the
complete analytical method and identification criteria.
LOQ is preferable to LOD because it avoids possible
confusion with “limit of detection”. However, in Reg.
396/2005, MRLs that are set at the limit of
quantification/determination are referred to as “LOD MRLs”.
not “LOQ MRLs”.
Mass accuracy: Mass accuracy is the deviation of the measured accurate
mass from the calculated exact mass of an ion. It can be
expressed as an absolute value in milliDaltons (mDa) or as a
relative value in parts-per-million (ppm) error and is
calculated as follows:
(accurate mass – exact mass)
Example:
the experimentally measured mass = 239.15098.
the theoretical exact mass of the ion m/z = 239.15028.
The mass accuracy = (239.15098 – 239.15028) = 0.7 mDa
or
(accurate mass – exact mass) / exact mass * 106
Example:
the experimentally measured mass = 239.15098.
the theoretical exact mass of the ion m/z = 239.15028
The mass accuracy=(239.15098–239.15028)/239.15028 *
106=2.9 ppm
Mass extraction window Width of the mass range around the exact mass used to
(MEW) obtain the extraction ion chromatograms. e.g. exact mass
± 1 mDa or exact mass ± 5 ppm.
Mass resolution Mass resolution (peak width definition. FWHM): (m/z)/Δ(m/z),
where Δ(m/z) is the Full Width of the mass profile peak at Half
its Maximum (FWHM) height.
The resolution of a mass spectrometry instrument is the ability
to distinguish between two ions with similar m/z values (IUPAC
definition22: the smallest mass difference between two equal
magnitude peaks so that the valley between them is a
specified fraction of the peak height).

22 Murray et al. (2013) Pure Appl. Chem., 85:1515–1609

Mass resolving power Mass resolving power: measure of the ability of a mass
spectrometer to provide a specified value of mass resolution
(so: an instrument specification)
The resolving power, defined at full-width half maximum
(FWHM), is m/Δm, where m is the m/z being measured and
Δm the width of the mass peak at half peak height.
Note 1: for magnetic sector instruments another definition is
used (“10% valley”). Roughly the difference between the two
definitions is a factor of 2 (i.e. 10.000 resolving power by the
10% valley method equals 20.000 resolving power by FWHM).
Note 2: mass resolving power is often confused or
interchangeably used with mass resolution (see definition
above).
Matrix blank See blank.
Matrix effect An influence of one or more co extracted compounds from
the sample on the measurement of the analyte
concentration or mass. It may be observed as increased or
decreased detector response compared with that produced
by solvent solutions of the analyte. The presence or absence
of such effects may be demonstrated by the difference of
response from standard in matrix extract and standard in
solvent

Rstd in matrix extract

𝑀𝐸 (𝑖𝑛 %) = ( − 1) x100
R std in solvent

R= Detector response

Matrix-matched /matrix- Calibration using standards prepared from extracts of the

based calibration same (matrix-matched) or any other (matrix-based) blank
matrix.
May MAY within this document means perhaps or possibly an
option (the action is optional).
Method A sequence of procedures or steps Wherever possible from
receipt of a sample through to the calculation and reporting
of results.
Method validation The process of characterising the performance to be
expected of a method in terms of its scope, specificity,
accuracy, sensitivity, repeatability and within laboratory
reproducibility. Some information on all characteristics,
except within laboratory reproducibility, should be
established prior to the analysis of samples, whereas data on
reproducibility and extensions of scope may be produced
from AQC, during the analysis of samples. Wherever possible,
the assessment of accuracy should involve analysis of
certified reference materials, participation in proficiency
tests, or other inter-laboratory comparisons.
MRL Maximum residue level. In Regulation 396/2005, MRLs are
listed for pesticide/commodity combinations. An asterisk
indicates that the MRL* is set at or about the LOQ with the
LOQ being here a consensus figure rather than a measured
value.
MRM In pesticide residue analysis: multi-residue method.
MRM In mass spectrometry: Application of selected reaction
monitoring (SRM) to multiple product ions from one or more
precursor ions.
MS Mass spectrometry.
MS/MS n
Tandem mass spectrometry here taken to include MS . An
MS procedure in which ions of a selected mass to charge
ratio (m/z) from the primary ionisation process are isolated,
fragmented usually by collision and the product ions
separated (MS/MS or MS2). In ion-trap mass spectrometers
the procedure may be carried out repetitively on a
sequence of product ions (MSn)although this is not usually
practical with low-level residues.
Must MUST within this document means an absolute requirement
(the action is mandatory).
MUST NOT means an absolute no.
Non-compliant(or A residue that exceeds the MRL when expanded
violative) residue measurement uncertainty is subtracted
NPD Nitrogen-phosphorus detector.
Performance verification See analytical quality control (AQC).
Precision The closeness of agreement between independent
analytical results obtained by applying the experimental
procedure under stipulated conditions. The smaller the
random part of the experimental errors which affect the
results the more precise the procedure. A measure of
precision (or imprecision) is the standard deviation21.
Precursor ion Ion that reacts to form particular product ions or undergoes
specified neutral losses. The reaction can be of different
types including unimolecular dissociation, ion/molecule
reaction, change in charge state, possibly preceded by
isomerization.
Priming Priming effects resemble long-lasting matrix effects and are
(of GC injectors and typically observed in gas chromatography. Typically, an
columns) aliquot of sample extract that has not been subjected to
clean-up may be injected after a new column or injector liner
is fitted or at the beginning of a batch of determinations. The
objective is to “deactivate” the GC system and maximise
transmission of the analyte to the detector. In some cases
large quantities of analyte may be injected with the same
objective. In such cases it is critically important that injections
of solvent or blank extracts are made before samples are
analysed, to ensure the absence of carryover of the analyte.
Priming effects are rarely permanent and may not eliminate
matrix effects.
Procedural blank See blank.
 Procedural standard Procedural standards are prepared by spiking a series of
calibration blank test portions with different amounts of analyte, prior to
extraction. The procedural standards are then analysed in
exactly the same way as the samples.
Product ion Ion formed as the product of a reaction involving a particular
precursor ion.
Reagent blank See blank.
Recovery Recovery (of analyte through an analytical method):
(of analyte through an Also referred to as ‘extraction recovery’, ‘absolute recovery’,
analytical method) or ‘recovery factor’.23 The proportion of analyte remaining at
the point of the final determination following its addition
(usually to a blank sample) prior to extraction. Usually
expressed as a percentage. Routine recovery refers to the
determination(s) performed with the analysis of each batch
of samples.
Reference material Material characterised with respect to its notionally
homogeneous content of analyte. Certified reference
materials (CRMs) are normally characterised in a number of
laboratories for concentration and homogeneity of
distribution of analyte. In-house reference materials are
characterised in the owner’s laboratory and the accuracy
may be unknown.
Reference spectrum A spectrum of absorption (e.g. UV. IR) , fluorescence,
ionisation products (MS) , etc.. derived from the analyte and
which may be characteristic of it. The reference mass
spectrum preferably should be produced from the “pure”
standard (or a solution of the “pure” standard) by the
instrument used for analysis of the samples, and similar
ionisation conditions must be used.
”Reference” standard A solid, liquid or gaseous compound that has been prepared
in a largely purified form and packed appropriately to ensure
stability and allow transportation and storage. The storage
conditions, expiry date, and purity must be indicated as well
as the hydratation water content and the isomer
composition where this is relevant.
Where standards are bought in solution they should be
treated as secondary standards (i.e. as stock or working
solutions).

23 Burns DT, Danzer K, Tow A., IUPAC Recommendations 2002, Use of the terms “recovery” and “apparent recovery” in analytical
procedures. Appl. Chem., 2002, 74(11), 2201-2205.
Repeatability (r) The precision (standard deviation) of measurement of an
analyte (usually obtained from recovery or analysis of
reference materials) , obtained using the same method on
the same sample(s) in a single laboratory over a short period
of time during which differences in the materials and
equipment used and/or the analysts involved will not occur.
The measure of precision usually is expressed in terms of
imprecision and computed as standard deviation of the test
result.
May also be defined as the value below which the absolute
difference between two single test results on identical
material, obtained under the above conditions, may be
expected to lie with a specified probability (e.g. 95%).
Reporting limit (RL) The lowest level at which residues will be reported as absolute
numbers. It is equal to or higher than the LOQ. For EU
monitoring purposes where samples for surveys are analysed
over a 12-month period, the same RL should be achievable
throughout the whole year.
Reproducibility (R) The precision (standard deviation) of measurement of an
analyte (usually by means of recovery or analysis of
reference materials) , obtained using the same method in a
number of laboratories, by different analysts, or over a period
in which differences in the materials and equipment will
occur. The measure of precision usually is expressed in terms
of imprecision and computed as standard deviation of the
test result.
Within-lab-reproducibility (RSDwR) is that produced in a single
laboratory under these conditions.
May also be defined as the value below which the absolute
difference between two single test results on identical
material. obtained under the above conditions, may be
expected to lie with a specified probability (e.g. 95%).
Response The absolute or relative signal output from the detector when
presented with the analyte.
RSD Relative standard deviation (coefficient of variation).
Sample A general term with many meanings but, in these guidelines,
refers to laboratory sample, test sample, test portion, or an
aliquot of extract.
Sample preparation The first of two processes which may be required to convert
the laboratory sample into the test sample. The removal of
parts that are not to be analysed, if required.
Sample processing The second of two processes which may be required to
convert the laboratory sample into the test sample. The
process of homogenization, comminution, mixing, etc.. if
required.
SDL The screening detection limit of a qualitative screening
(qualitative screening) method is the lowest concentration for which it has been
demonstrated that a certain analyte can be detected (not
necessarily meeting unequivocal identification criteria ) in at
least 95% of the samples (i.e. a false-negative rate of 5% is
accepted).
Selectivity The ability of the extraction, the clean-up, the derivatisation,
the separation system and (especially) the detector to
discriminate between the analyte and other compounds.
GC-ECD is a selective determination system providing no
specificity.
Should SHOULD within this document means a recommendation
that may be ignored but only in particular circumstances
(because of valid reasons) and the full implications of
ignoring the recommendation must be understood and
carefully assessed before choosing a different course of
action.
SHOULD NOT means not recommended. although it may be
acceptable in particular circumstances, but the full
implications of ignoring the recommendation must be
understood and carefully assessed.
Significant figures Those digits in a number that are known with certainty, plus
the first uncertain digit.
Ex. 3 significant figures.
0.104. 1.04. 104. 1.04 x104
The 1 and the middle 0 are certain, and the 4 is uncertain, but
significant.
Note: Initial zeroes are never significant. Exponential number
has no effect on the number of significant figures.
SIM Selected ion monitoring. Operation of a mass spectrometer
in which the abundance of several ions of specific m/z values
are recorded rather than the entire mass spectrum.
S/N Signal-to-noise ratio.
Solid phase dilution Dilution of a pesticide by distribution within a finely divided
solid. such as starch powder. Normally used only for insoluble
analytes such as the complex dithiocarbamates.
Specificity The ability of the detector (supported by the selectivity of the
extraction, clean-up, derivatisation or separation, if
necessary) to provide signals that effectively identify the
analyte. GC-MS with EI is a fairly non-selective determination
system capable of high specificity. High resolution mass MS
and MSn can be both highly selective and highly specific.
Spike or spiking Addition of analyte for the purposes of recovery
determination or standard addition.
SPME Solid phase micro-extraction.
SRM Selected reaction monitoring. Measurement of specific
product ions corresponding to m/z selected precursor ions
recorded via two or more stages of mass spectrometry (MSn).
Standard A general term which may refer to a “pure” standard, stock
standard, working standard or calibration standard.
Standard addition a) “Sample standard addition” refers to standard addition to
analytical test portions, prior to extraction
b) “Extract standard addition” refers to standard addition to
aliquots of the sample extract, prior to injection
Stock standard solution The most concentrated solution (or solid dilution, etc.) of the
“pure” standard or internal standard, from which aliquots are
used to prepare working standard solutions or calibration
standard solutions.
Test portion A representative sub-sample of the test sample, i.e. the
portion which is to be analysed.
Test sample The laboratory sample after removal of any parts that are not
to be analysed, e.g. bones, adhering soil. It may or may not
be comminuted and mixed before withdrawing test portions.
See also Directive 2002/63/EC.
Trueness The measure of trueness is normally expressed as ‘bias’.
The closeness of agreement between the average value
obtained from a series of test results (i.e. the mean recovery)
an accepted reference or true value (ISO 5725-1).
Uncertainty A range around the reported result within which the true
(of measurement) value can be expected to lie with a specified probability
(confidence level, usually 95%). Uncertainty data should
encompass trueness (bias) and reproducibility.
Unit (sample) A single fruit, vegetable, animal, cereal grain, can, etc. For
example, an apple, a T-bone steak, a grain of wheat, a can
of tomato soup.
Unit mass resolution Mass resolution such that it is possible to clearly distinguish a
peak corresponding to a singly charged ion from its
neighbours 1 Dalton away, usually with no more than 5–10 %
overlap.
Validation See method validation.
Violative residue A residue which exceeds the MRL or is unlawful for any other
reason.
Within-laboratory See reproducibility.
reproducibility
Working standard A general term used to describe dilutions produced from the
solution stock standard, which are used, for example, to spike for
recovery determination or to prepare calibration standard
solutions.