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DNAReplication 103108

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Chapter 2.

DNA Replication
The discovery of the double helical DNA structure
provided a hint as to how DNA divides and makes
copies of itself.
This model suggests that the two strands of the double
helix separate during replication, each strand serving
as a template from which the new complementary
strand is copied.
Suggested Models of DNA Replication
Meselson and Stahl Experiment
DNA Replication in Prokaryotes

Lesson 1
DNA Replication Process
1. DNA unwinds at the origin of replication.
2. Helicase opens up the DNA-forming replication
forks; these are extended bidirectionally.
3. Single-strand binding proteins coat the DNA around
the replication fork to prevent rewinding of the
DNA.
DNA Replication Process
4. Topoisomerase binds at the ahead of the replication
fork to prevent supercoiling.
5. Primase synthesizes RNA primers complementary
to the DNA strand.
6. DNA polymerase starts adding nucleotides to the 3’-
OH end of the primer.
DNA Replication Process
7. Elongation of both the lagging and the leading
strand continues.
8. RNA primers are removed by exonuclease activity.
9. Gaps are filled by DNA pol by adding dNTPs.
DNA Replication Process
10. The gap between the two DNA fragments is sealed
by DNA ligase, which helps in the formation of the
phosphodiester bonds.
DNA Replication Process
Enzymes Involved in the Prokaryotic DNA
Replication
Prokaryotic DNA Replication Enzymes and Their Function

Enzyme/Protein Specific Function


Exonuclease activity removes RNA primer and
DNA pol I
replaces with newly synthesized DNA
DNA pol II Repair function
Main enzyme that adds nucleotides in the 5’-3’
DNA pol III
direction
Opens the DNA helix by breaking hydrogen bonds
Helicase
between the nitrogenous bases.
Enzymes Involved in the Prokaryotic DNA
Replication
Prokaryotic DNA Replication Enzymes and Their Function
Seals the gaps between the Okazaki fragments to
Ligase
create one continuous DNA strand
Synthesizes DNA primers needed to start the
Primase
replication
Helps to hold the DNA polymerase in place when
Sliding Camp
nucleotides are being added
Helps relieve the stress on DNA when unwinding by
Topoisomerase
causing breaks and then resealing the DNA
Enzymes Involved in the Prokaryotic DNA
Replication
Prokaryotic DNA Replication Enzymes and Their Function
Binds to single-stranded DNA to avoid DNA
Single-strand binding proteins (SSB)
rewinding back
DNA Replication in Eukaryotes

Lesson 2
DNA Replication in Eukaryotes
• Eukaryotic genomes are much more complex and
larger in size than prokaryotic genomes.
• Eukaryotic chromosome have multiple origins of
replication; humans for example can have up to 100,
000 origins of replication.
DNA Replication in Eukaryotes
• The rate of replication is approximately 100
nucleotides per second.
• DNA polymerases in eukaryotes is much more than
prokaryotes: 14 are known, 5 of which are known to
have major roles during replication.
(1)pol , (2)pol , (3)pol , (4) pol , (5) pol 
Telomere Replication
• Telomeres - the ends of the linear chromosomes.
• - have repetitive sequences that code for no
particular gene.
• - These telomeres protect the genes from getting
deleted as cells continue to divide.
Telomere Replication
• The discovery of the enzyme telomerase helped in
the understanding of how chromosome ends are
maintained. The telomerase enzyme contains a
catalytic part and a built-in RNA template.
Telomere Replication
Telomerase and Aging
• An enzyme named telomerase adds bases to the ends
of telomeres. In young cells, telomerase keeps
telomeres from wearing down too much. But as cells
divide repeatedly, there is not enough telomerase, so
the telomeres grow shorter and the cells age.
Telomerase and Aging
• An enzyme named telomerase adds bases to the ends
of telomeres. In young cells, telomerase keeps
telomeres from wearing down too much. But as cells
divide repeatedly, there is not enough telomerase, so
the telomeres grow shorter and the cells age.
Difference between Prokaryotic and Eukaryotic
Replication
Property Prokarypotes Eukaryotes

Origin of Replication Single Multiple

Rate of Replication 1, 000 nucleotide/s 50 to 100 nucleotide/s

DNA polymerase types 5 14

Telomerase Not present Present

RNA primer removal DNA pol I Rnase H

Strand elongation DNA pol III Pol , pol 

Sliding camp Sliding Camp PCNA

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