ABCA1 (Q286987)

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protein-coding gene in the species Homo sapiens

ATP-binding cassette, sub-family A (ABC1), member 1
Abca1
ABC-1
Abc1
ABC1
CERP
HDLDT1
TGD
ATP binding cassette subfamily A member 1
HDLCQTL13
HPALP1

Language	Label	Description	Also known as
English	ABCA1	protein-coding gene in the species Homo sapiens	ATP-binding cassette, sub-family A (ABC1), member 1 Abca1 ABC-1 Abc1 ABC1 CERP HDLDT1 TGD ATP binding cassette subfamily A member 1 HDLCQTL13 HPALP1

Statements

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

protein-coding gene

1 reference

Ensembl Release 87

Ensembl gene ID

ENSG00000165029

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

ATP binding cassette subfamily A member 1

1 reference

6 July 2017

UniProt protein ID

genetic association

determination method or standard

genome-wide association study

1 reference

https://gemma.msl.ubc.ca/phenotypes.html?phenotypeUrlId=DOID_11830&ncbiId=19

http://www.genome.gov/gwastudies/index.cfm?gene=ABCA1

A genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population

25 May 2020

metabolic disease

determination method or standard

genome-wide association study

1 reference

https://gemma.msl.ubc.ca/phenotypes.html?phenotypeUrlId=DOID_0014667&ncbiId=19

http://www.genome.gov/gwastudies/index.cfm?gene=ABCA1

Genome-wide screen for metabolic syndrome susceptibility Loci reveals strong lipid gene contribution but no evidence for common genetic basis for clustering of metabolic syndrome traits

25 May 2020

lipid metabolism disorder

determination method or standard

genome-wide association study

1 reference

https://gemma.msl.ubc.ca/phenotypes.html?phenotypeUrlId=DOID_3146&ncbiId=19

http://www.genome.gov/gwastudies/index.cfm?gene=ABCA1

Genome-wide association study identifies multiple loci influencing human serum metabolite levels

25 May 2020

coronary artery disease

determination method or standard

genome-wide association study

1 reference

https://gemma.msl.ubc.ca/phenotypes.html?phenotypeUrlId=DOID_3393&ncbiId=19

http://www.genome.gov/gwastudies/index.cfm?gene=ABCA1

Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project

25 May 2020

Tangier disease

2 references

UniProt protein ID

13 August 2019

Open Targets Platform

24 August 2023

https://platform.opentargets.org/evidence/ENSG00000165029/MONDO_0008783

based on heuristic

inferred from an Open Targets association score over 0.7

human chromosome 9

genomic assembly

genome assembly GRCh38

Genome assembly GRCh37

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

strand orientation

genomic assembly

genome assembly GRCh38

Genome assembly GRCh37

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

107543283

human chromosome 9

genomic assembly

Genome assembly GRCh37

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

104781006

human chromosome 9

genomic assembly

genome assembly GRCh38

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

107690518

human chromosome 9

genomic assembly

Genome assembly GRCh37

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

104928155

human chromosome 9

genomic assembly

genome assembly GRCh38

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

cytogenetic location

9q31.1

1 reference

15 May 2022

21130

1 reference

15 May 2022

Gene Atlas image

PBB GE ABCA1 216066 at fs.png
732 × 530; 12 KB

0 references

PBB GE ABCA1 203504 s at fs.png
732 × 530; 11 KB

0 references

2 references

HomoloGene build68

21130

Orthologous MAtrix

https://omabrowser.org/oma/vps/O95477/

1 reference

HomoloGene build68

21130

1 reference

HomoloGene build68

21130

Caenorhabditis elegans

1 reference

HomoloGene build68

21130

2 references

HomoloGene build68

21130

Orthologous MAtrix

https://omabrowser.org/oma/vps/O95477/

1

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

left adrenal gland

2

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

left adrenal cortex

3

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

right adrenal gland

4

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

5

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

right adrenal cortex

6

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

epithelium of colon

7

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

stromal cell of endometrium

8

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

lower lobe of lung

9

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

10

1 reference

7 June 2024

https://www.bgee.org/gene/ENSG00000165029

http://identifiers.org/ncbigene/19

1 reference

Identifiers.org

http://www.ebi.ac.uk/miriam/main/collections/MIR:00000069

Identifiers

1 reference

15 May 2022

1 reference

15 May 2022

1 reference

Ensembl gene ID

ENSG00000165029

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

Ensembl transcript ID

ENST00000494467

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

ENST00000374733

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

ENST00000374736

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

ENST00000423487

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

ENST00000678995

1 reference

ensembl Release 106

Ensembl gene ID

ENSG00000165029

1 reference

Freebase Data Dumps

publication date

28 October 2013

HGNC gene symbol

1 reference

15 May 2022

1 reference

15 May 2022

1 reference

Online Mendelian Inheritance in Man

19 August 2019

1 reference

based on heuristic

inferred by common HGNC mappings on source and on Wikidata

15 June 2023

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

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