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Ontological Unpacking as Explanation: The Case of the Viral Conceptual Model

Published: 18 October 2021 Publication History

Abstract

Inspired by the need to understand the genomic aspects of COVID-19, the Viral Conceptual Model captures and represents the sequencing of viruses. Although the model has already been successfully used, it should have a strong ontological foundation to ensure that it can be consistently applied and expanded. We apply an ontological analysis of the Viral Conceptual Model, using OntoUML, to unpack and identify its core components. The analysis illustrates the feasibility of bringing ontological clarity to complex models. The process of revealing the ontological semantics of a data structuring model provides a fundamental type of explanation for symbolic models, including conceptual models.

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Cited By

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  • (2023)Conceptual Modeling: Topics, Themes, and Technology TrendsACM Computing Surveys10.1145/358933855:14s(1-38)Online publication date: 17-Jul-2023
  • (2023)A Reference Meta-model to Understand DNA Variant Interpretation GuidelinesConceptual Modeling10.1007/978-3-031-47262-6_20(375-393)Online publication date: 6-Nov-2023
  • (2023)Ontological Representation of FAIR Principles: A Blueprint for FAIRer Data SourcesAdvanced Information Systems Engineering10.1007/978-3-031-34560-9_16(261-277)Online publication date: 12-Jun-2023
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        Published In

        cover image Guide Proceedings
        Conceptual Modeling: 40th International Conference, ER 2021, Virtual Event, October 18–21, 2021, Proceedings
        Oct 2021
        427 pages
        ISBN:978-3-030-89021-6
        DOI:10.1007/978-3-030-89022-3
        • Editors:
        • Aditya Ghose,
        • Jennifer Horkoff,
        • Vítor E. Silva Souza,
        • Jeffrey Parsons,
        • Joerg Evermann

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        Springer-Verlag

        Berlin, Heidelberg

        Publication History

        Published: 18 October 2021

        Author Tags

        1. Viral Conceptual Model (VCM)
        2. Ontological analysis
        3. OntoUML
        4. Virus genomics
        5. COVID-19

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        Cited By

        View all
        • (2023)Conceptual Modeling: Topics, Themes, and Technology TrendsACM Computing Surveys10.1145/358933855:14s(1-38)Online publication date: 17-Jul-2023
        • (2023)A Reference Meta-model to Understand DNA Variant Interpretation GuidelinesConceptual Modeling10.1007/978-3-031-47262-6_20(375-393)Online publication date: 6-Nov-2023
        • (2023)Ontological Representation of FAIR Principles: A Blueprint for FAIRer Data SourcesAdvanced Information Systems Engineering10.1007/978-3-031-34560-9_16(261-277)Online publication date: 12-Jun-2023
        • (2022)An Initial Empirical Assessment of an Ontological Model of the Human GenomeAdvances in Conceptual Modeling10.1007/978-3-031-22036-4_6(55-65)Online publication date: 17-Oct-2022
        • (2022)An Ontological Analysis of Digital TechnologyConceptual Modeling10.1007/978-3-031-17995-2_7(92-101)Online publication date: 17-Oct-2022
        • (2022)An Ontology of Security from a Risk Treatment PerspectiveConceptual Modeling10.1007/978-3-031-17995-2_26(365-379)Online publication date: 17-Oct-2022

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