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Extended probe method for linkage discovery over high-cardinality alphabets

Published: 07 July 2007 Publication History

Abstract

The work addresses the problem of identifying the epistatic linkage of a function from high cardinality alphabets to the real numbers. It is a generalization of Heckendorn and Wright's work that restricts problem representation into the binary-string domain. Discrete Fourier transform is used to analyze underlying structure in high-cardinality alphabets space. Boolean operators are replaced with new operators such as ⊕, ⊖, ⊗ and so on in high cardinality alphabets. The "probe" formulation is redesigned to determine epistatic properties of non-binary function. Theoretical analysis shows the close relationship between probe value and problem structure. A deterministic and a stochastic algorithm based on properties of probes are proposed to completely identify the linkage structure and rigourously compute all Fourier coefficients. Some discussion about linkage detection for continuous problems is given.

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Cited By

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  • (2012)Inductive linkage identification on building blocks of different sizes and typesInternational Journal of Systems Science10.1080/00207721.2011.56663943:12(2202-2213)Online publication date: Dec-2012
  • (2008)Research topics in discrete estimation of distribution algorithms based on factorizationsMemetic Computing10.1007/s12293-008-0002-71:1(35-54)Online publication date: 12-Dec-2008
  • (2007)Matrix interpretation of generalized embedded landscapeProceedings of the 9th annual conference on Genetic and evolutionary computation10.1145/1276958.1277269(1540-1542)Online publication date: 7-Jul-2007

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cover image ACM Conferences
GECCO '07: Proceedings of the 9th annual conference on Genetic and evolutionary computation
July 2007
2313 pages
ISBN:9781595936974
DOI:10.1145/1276958
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Association for Computing Machinery

New York, NY, United States

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Published: 07 July 2007

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Author Tags

  1. Fourier transform
  2. epistasis
  3. high-cardinality probe
  4. linkage detection

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GECCO07
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GECCO '07 Paper Acceptance Rate 266 of 577 submissions, 46%;
Overall Acceptance Rate 1,669 of 4,410 submissions, 38%

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Cited By

View all
  • (2012)Inductive linkage identification on building blocks of different sizes and typesInternational Journal of Systems Science10.1080/00207721.2011.56663943:12(2202-2213)Online publication date: Dec-2012
  • (2008)Research topics in discrete estimation of distribution algorithms based on factorizationsMemetic Computing10.1007/s12293-008-0002-71:1(35-54)Online publication date: 12-Dec-2008
  • (2007)Matrix interpretation of generalized embedded landscapeProceedings of the 9th annual conference on Genetic and evolutionary computation10.1145/1276958.1277269(1540-1542)Online publication date: 7-Jul-2007

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