Plant roots and microorganisms interact and compete for nutrients within the rhizosphere, which i... more Plant roots and microorganisms interact and compete for nutrients within the rhizosphere, which is considered one of the most biologically complex systems on Earth. Unraveling the nitrogen (N) cycle is key to understanding and managing nutrient flows in terrestrial ecosystems, yet to date it has proved impossible to analyze and image N transfer in situ within such a complex system at a scale relevant to soil-microbe-plant interactions. Linking the physical heterogeneity of soil to biological processes marks a current frontier in plant and soil sciences. Here we present a new and widely applicable approach that allows imaging of the spatial and temporal dynamics of the stable isotope (15)N assimilated within the rhizosphere. This approach allows visualization and measurement of nutrient resource capture between competing plant cells and microorganisms. For confirmation we show the correlative use of nanoscale secondary ion mass spectrometry, and transmission electron microscopy, to i...
The relationship between calcification and photosynthesis in coral was investigated using standar... more The relationship between calcification and photosynthesis in coral was investigated using standard sea water with enhanced calcium concentration. In standard sea water at 23 degrees C with the calcium concentration increased by 2.5 mmol l(-1), incorporation of calcium into the skeleton increased by 30-61 %, depending on the method of data normalisation, and photosynthesis, measured as (14)C incorporation into the tissues, also increased by 87 %. At 29 degrees C, calcium incorporation into the skeleton increased by 54-84 % and (14)C incorporation increased by 32 % when sea water calcium concentration was increased by 5 mmol l(-1). However, photosynthesis measured as net photosynthetic oxygen production did not increase. Similarly there was no change in respiration rate when coral polyps were incubated in high-calcium sea water. It is conjectured that an increase in photorespiration may be responsible for the latter observations. Bisphosphonate has been considered to inhibit calcifica...
Element concentrations were measured by X-ray microanalysis in seawater (SW) compartments and muc... more Element concentrations were measured by X-ray microanalysis in seawater (SW) compartments and mucocytes in bulk, frozen-hydrated preparations of the scleractinian coral Galaxea fascicularis. Quantitative X-ray microanalysis of polyps sampled in the daytime revealed that concentrations of the elements Na, S, K and Ca were all significantly higher in a thin (10-20 micro m) external SW layer adjacent to the oral ectoderm (P<0.05, <0.05, <0.0001 and <0.01, respectively) than in standard SW. In polyps sampled during night-time, concentrations of Ca and S in this external SW layer were significantly reduced (P<0.05). Ca concentration in the coelenteron and extrathecal coelenteron was significantly higher (P<0.001) than in the external SW layer, regardless of time of sampling, suggesting that Ca(2+) transport across the oral epithelium occurs via an active, transcellular route. X-ray microanalyses of mucocytes revealed that the concentration of S was high and did not vary...
To compare the crystalline microstructure of exsert septa, polyps of the scleractinian coral Gala... more To compare the crystalline microstructure of exsert septa, polyps of the scleractinian coral Galaxea fascicularis were sampled from shallow reef flat colonies, from colonies living at a depth of 9 m, and from colonies kept in a closed-circuit aquarium. Septal crystal structure and orientation was markedly different between corals in the field and in aquaria. In samples collected from deep water, acicular crystals were composed of conglomerates of finer crystals, and skeletal filling was considerably reduced when compared with samples collected from shallow water. Comparisons were also made between septa prepared in sodium hypochlorite (commercial bleach), sodium hydroxide (NaOH), hydrogen peroxide (H(2)O(2)), and distilled water (dH(2)O). Commercial bleach was the most effective solvent for tissue dissolution in investigations of skeletal structure. Samples prepared in NaOH commonly displayed crystalline artefacts, while the use of dH(2)O and H(2)O(2) was labor intensive and often r...
Plants rapidly release photoassimilated carbon (C) to the soil via direct root exudation and asso... more Plants rapidly release photoassimilated carbon (C) to the soil via direct root exudation and associated mycorrhizal fungi, with both pathways promoting plant nutrient availability. This study aimed to explore these pathways from the root's vascular bundle to soil microbial communities. Using nanoscale secondary ion mass spectrometry (NanoSIMS) imaging and (13) C-phospho- and neutral lipid fatty acids, we traced in-situ flows of recently photoassimilated C of (13) CO2 -exposed wheat (Triticum aestivum) through arbuscular mycorrhiza (AM) into root- and hyphae-associated soil microbial communities. Intraradical hyphae of AM fungi were significantly (13) C-enriched compared to other root-cortex areas after 8Â h of labelling. Immature fine root areas close to the root tip, where AM features were absent, showed signs of passive C loss and co-location of photoassimilates with nitrogen taken up from the soil solution. A significant and exclusively fresh proportion of (13) C-photosynthate...
Plant roots and microorganisms interact and compete for nutrients within the rhizosphere, which i... more Plant roots and microorganisms interact and compete for nutrients within the rhizosphere, which is considered one of the most biologically complex systems on Earth. Unraveling the nitrogen (N) cycle is key to understanding and managing nutrient flows in terrestrial ecosystems, yet to date it has proved impossible to analyze and image N transfer in situ within such a complex system at a scale relevant to soil-microbe-plant interactions. Linking the physical heterogeneity of soil to biological processes marks a current frontier in plant and soil sciences. Here we present a new and widely applicable approach that allows imaging of the spatial and temporal dynamics of the stable isotope (15)N assimilated within the rhizosphere. This approach allows visualization and measurement of nutrient resource capture between competing plant cells and microorganisms. For confirmation we show the correlative use of nanoscale secondary ion mass spectrometry, and transmission electron microscopy, to i...
The relationship between calcification and photosynthesis in coral was investigated using standar... more The relationship between calcification and photosynthesis in coral was investigated using standard sea water with enhanced calcium concentration. In standard sea water at 23 degrees C with the calcium concentration increased by 2.5 mmol l(-1), incorporation of calcium into the skeleton increased by 30-61 %, depending on the method of data normalisation, and photosynthesis, measured as (14)C incorporation into the tissues, also increased by 87 %. At 29 degrees C, calcium incorporation into the skeleton increased by 54-84 % and (14)C incorporation increased by 32 % when sea water calcium concentration was increased by 5 mmol l(-1). However, photosynthesis measured as net photosynthetic oxygen production did not increase. Similarly there was no change in respiration rate when coral polyps were incubated in high-calcium sea water. It is conjectured that an increase in photorespiration may be responsible for the latter observations. Bisphosphonate has been considered to inhibit calcifica...
Element concentrations were measured by X-ray microanalysis in seawater (SW) compartments and muc... more Element concentrations were measured by X-ray microanalysis in seawater (SW) compartments and mucocytes in bulk, frozen-hydrated preparations of the scleractinian coral Galaxea fascicularis. Quantitative X-ray microanalysis of polyps sampled in the daytime revealed that concentrations of the elements Na, S, K and Ca were all significantly higher in a thin (10-20 micro m) external SW layer adjacent to the oral ectoderm (P<0.05, <0.05, <0.0001 and <0.01, respectively) than in standard SW. In polyps sampled during night-time, concentrations of Ca and S in this external SW layer were significantly reduced (P<0.05). Ca concentration in the coelenteron and extrathecal coelenteron was significantly higher (P<0.001) than in the external SW layer, regardless of time of sampling, suggesting that Ca(2+) transport across the oral epithelium occurs via an active, transcellular route. X-ray microanalyses of mucocytes revealed that the concentration of S was high and did not vary...
To compare the crystalline microstructure of exsert septa, polyps of the scleractinian coral Gala... more To compare the crystalline microstructure of exsert septa, polyps of the scleractinian coral Galaxea fascicularis were sampled from shallow reef flat colonies, from colonies living at a depth of 9 m, and from colonies kept in a closed-circuit aquarium. Septal crystal structure and orientation was markedly different between corals in the field and in aquaria. In samples collected from deep water, acicular crystals were composed of conglomerates of finer crystals, and skeletal filling was considerably reduced when compared with samples collected from shallow water. Comparisons were also made between septa prepared in sodium hypochlorite (commercial bleach), sodium hydroxide (NaOH), hydrogen peroxide (H(2)O(2)), and distilled water (dH(2)O). Commercial bleach was the most effective solvent for tissue dissolution in investigations of skeletal structure. Samples prepared in NaOH commonly displayed crystalline artefacts, while the use of dH(2)O and H(2)O(2) was labor intensive and often r...
Plants rapidly release photoassimilated carbon (C) to the soil via direct root exudation and asso... more Plants rapidly release photoassimilated carbon (C) to the soil via direct root exudation and associated mycorrhizal fungi, with both pathways promoting plant nutrient availability. This study aimed to explore these pathways from the root's vascular bundle to soil microbial communities. Using nanoscale secondary ion mass spectrometry (NanoSIMS) imaging and (13) C-phospho- and neutral lipid fatty acids, we traced in-situ flows of recently photoassimilated C of (13) CO2 -exposed wheat (Triticum aestivum) through arbuscular mycorrhiza (AM) into root- and hyphae-associated soil microbial communities. Intraradical hyphae of AM fungi were significantly (13) C-enriched compared to other root-cortex areas after 8Â h of labelling. Immature fine root areas close to the root tip, where AM features were absent, showed signs of passive C loss and co-location of photoassimilates with nitrogen taken up from the soil solution. A significant and exclusively fresh proportion of (13) C-photosynthate...
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