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    Stephanie Palmer

    To evaluate the nature of the neural code in the cerebral cortex, we have used a combination of theory and experiment to assess how information is represented in a realistic cortical population response. We have shown how a sensory... more
    To evaluate the nature of the neural code in the cerebral cortex, we have used a combination of theory and experiment to assess how information is represented in a realistic cortical population response. We have shown how a sensory stimulus could be estimated on a biologically-realistic time scale, given brief individual responses from a population of neurons with similar response
    A behavioral response appropriate to a sensory stimulus depends on the collective activity of thousands of interconnected neurons. The vast majority of cortical connections arise from neighboring neurons, and thus understanding the... more
    A behavioral response appropriate to a sensory stimulus depends on the collective activity of thousands of interconnected neurons. The vast majority of cortical connections arise from neighboring neurons, and thus understanding the cortical code requires characterizing information representation at the scale of the cortical microcircuit. Using two-photon calcium imaging we densely sampled the thalamically evoked response of hundreds of neurons spanning multiple layers and columns in thalamocortical slices of mouse somatosensory cortex. We then used a biologically plausible decoder to characterize the representation of two distinct thalamic inputs, at the level of the microcircuit, to reveal those aspects of the activity pattern that are likely relevant to downstream neurons. Our data suggest a sparse code, distributed across lamina, in which a small population of cells carries stimulus-relevant information. Furthermore, we find that, within this subset of neurons, decoder performance improves when noise correlations are taken into account.
    The origin of orientation selectivity in primary visual cortex (V1) is a model problem for understanding cerebral cortical circuitry. A key constraint is that orientation tuning width is invariant under changes in stimulus contrast. We... more
    The origin of orientation selectivity in primary visual cortex (V1) is a model problem for understanding cerebral cortical circuitry. A key constraint is that orientation tuning width is invariant under changes in stimulus contrast. We have previously shown that this can arise from the combination of feedforward lateral geniculate nucleus (LGN) input and an orientation-untuned component of feedforward inhibition that dominates excitation. However, these models did not include the large background voltage noise observed in vivo. Here, we include this noise and examine a simple model of cat V1 response. Constraining our simulations to fit physiological data, our single model parameter is the strength of feedforward inhibition relative to LGN excitation. With physiological noise, the contrast invariance of orientation tuning depends little on inhibition level, although very weak or very strong inhibition leads to weak broadening or sharpening, respectively, of tuning with contrast. For any inhibition level, an alternative measure of orientation tuning -- the circular variance -- decreases with contrast as observed experimentally. These results arise primarily because the voltage noise causes large inputs to be much more strongly amplified than small ones in evoking spiking responses, relatively suppressing responses to nonpreferred stimuli. However, inhibition comparable to or stronger than excitation appears necessary to suppress spiking responses to nonpreferred orientations to the extent seen in vivo and to allow the emergence of a tuned mean voltage response. These two response properties provide the strongest constraints on model details. Antiphase inhibition from inhibitory simple cells, and not just untuned inhibition from inhibitory complex cells, appears necessary to fully explain these aspects of cortical orientation tuning.
    Guiding behavior requires the brain to make predictions about the future values of sensory inputs. Here, we show that efficient predictive computation starts at the earliest stages of the visual system. We compute how much information... more
    Guiding behavior requires the brain to make predictions about the future values of sensory inputs. Here, we show that efficient predictive computation starts at the earliest stages of the visual system. We compute how much information groups of retinal ganglion cells carry about the future state of their visual inputs and show that nearly every cell in the retina participates in a group of cells for which this predictive information is close to the physical limit set by the statistical structure of the inputs themselves. Groups of cells in the retina carry information about the future state of their own activity, and we show that this information can be compressed further and encoded by downstream predictor neurons that exhibit feature selectivity that would support predictive computations. Efficient representation of predictive information is a candidate principle that can be applied at each stage of neural computation.