Understanding the structure and dynamics of water's constituent ions, proton and hydroxide, has been a subject of numerous experimental and theoretical studies over the last century. Besides their obvious importance in acid−base... more
Understanding the structure and dynamics of water's constituent ions, proton and hydroxide, has been a subject of numerous experimental and theoretical studies over the last century. Besides their obvious importance in acid−base chemistry, these ions play an important role in numerous applications ranging from enzyme catalysis to environmental chemistry. Despite a long history of research, many fundamental issues regarding their properties continue to be an active area of research. Here, we provide a review of the experimental and theoretical advances made in the last several decades in understanding the structure, dynamics, and transport of the proton and hydroxide ions in different aqueous environments, ranging from water clusters to the bulk liquid and its interfaces with hydrophobic surfaces. The propensity of these ions to accumulate at hydrophobic surfaces has been a subject of intense debate, and we highlight the open issues and challenges in this area. Biological applications reviewed include proton transport along the hydration layer of various membranes and through channel proteins, problems that are at the core of cellular bioenergetics.
Electroabsorption is used to determine the difference dipole moment, N D m N , and the difference polarizability, D a ,o f . HBT and HBO, two molecules that undergo excited-state intramolecular proton transfer ESIPT . These measurements... more
Electroabsorption is used to determine the difference dipole moment, N D m N , and the difference polarizability, D a ,o f . HBT and HBO, two molecules that undergo excited-state intramolecular proton transfer ESIPT . These measurements are ) . . compared to ab initio 6-31G and semi-empirical INDO1rs calculations. Good agreement is obtained between ab initio and experimental N D m N values. However, the negative D a values obtained experimentally for both molecules are in disagreement with the calculated D a values which are positive. The absorption maxima, measured as a function of solvent polarity, support the electroabsorption results. Agreement between the observed and calulated shift requires that D a for both molecules be negative. q 1998 Elsevier Science B.V. All rights reserved.
Excited-state intramolecular proton transfer (ESIPT) and dual luminescence behaviour of 3-hydroxyflavone (3-HF) have been utilized to monitor its binding to liposomal membranes prepared from egg yolk phosphatydilcholine (EYPC).... more
We have measured the fluorescence decay of I-hydroxypyrene-1,3,6-trisulfonate due to proton transfer to solvent in water-methanol mixtures. The data agree quantitatively with the reversible, diffusion-influenced proton-transfer... more
We have measured the fluorescence decay of I-hydroxypyrene-1,3,6-trisulfonate due to proton transfer to solvent in water-methanol mixtures. The data agree quantitatively with the reversible, diffusion-influenced proton-transfer mechanism in all solutions. No significant deviations from a short-time exponential decay or a long-time power law decay were found that could support a recently suggested water molecule diffusion mechanism. Solvent-induced variations in the deprotonation rate coefficient are very close to those in the corresponding equilibrium coefficient. Analysis of measured and literature pK data indicates that the composition dependence is mainly due to localized counterion stability in water-rich solutions and to proton stability in methanol-rich solutions. Quantitative agreement with literature compilations of proton-transfer free energy is obtained. These observations challenge the prevailing idea that a minimal cluster of four water molecules is the required proton acceptor in these solutions.
... CHEMICAL PHYSICS LETTERS 12Apr11 1991 Volume 179, number 1,2 Munna Sarkar and Pradeep K. Sengupta Saha Institute of Nuclear Physics, 1 AF, Bidhannagar, Calcutta 700 064, India Received 1 November 1990; in final ... [2] A. Nag and K.... more
... CHEMICAL PHYSICS LETTERS 12Apr11 1991 Volume 179, number 1,2 Munna Sarkar and Pradeep K. Sengupta Saha Institute of Nuclear Physics, 1 AF, Bidhannagar, Calcutta 700 064, India Received 1 November 1990; in final ... [2] A. Nag and K. Bhattacharyya, J. Photochem. ...
The phototropins constitute an important class of plant photoreceptor kinases that control a range of physiological responses, including phototropism, light-directed chloroplast movement, and light-induced stomatal opening. The LOV2... more
The phototropins constitute an important class of plant photoreceptor kinases that control a range of physiological responses, including phototropism, light-directed chloroplast movement, and light-induced stomatal opening. The LOV2 domain of phototropin binds a molecule of ...
The structure and electronic spectra of 2-methylamino-6-methyl-4-nitropyridine N-oxide (2M6M) were investigated. The X-ray structure of 2M6M molecule shows that it crystallizes in the monoclinic system of the P21/n space group and forms... more
The structure and electronic spectra of 2-methylamino-6-methyl-4-nitropyridine N-oxide (2M6M) were investigated. The X-ray structure of 2M6M molecule shows that it crystallizes in the monoclinic system of the P21/n space group and forms internally hydrogen-bonded [N
ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full... more
ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.
We report investigations of resonance energy transfer in the green fluorescent protein and calmodulin-based fluorescent indicator constructs for Ca(2+) called cameleons using steady-state and time-resolved spectroscopy of the full... more
We report investigations of resonance energy transfer in the green fluorescent protein and calmodulin-based fluorescent indicator constructs for Ca(2+) called cameleons using steady-state and time-resolved spectroscopy of the full construct and of the component green fluorescent protein mutants, namely ECFP (donor) and EYFP (acceptor). EYFP displays a complicated photophysical behavior including protonated and deprotonated species involved in an excited-state proton transfer. When EYFP is excited in the absorption band of the protonated species, a fast nonradiative deactivation occurs involving almost 97% of the excited protonated population and leading to a low efficiency of excited-state proton transfer to the deprotonated species. ECFP displays a multiexponential fluorescence decay with a major contributing component of 3.2 ns. The time-resolved fluorescence data obtained upon excitation at 420 nm of Ca(2+)-free and Ca(2+)-bound YC3.1 cameleon constructs point to the existence of...
A theoretical and experimental study on the absorption and fluorescence properties of a newly synthesized compound 3,6-bis(4,5-dihydroxyoxazo-2-yl)benzene-1,2-diol in ethanol is reported. Evidence suggesting intramolecular proton transfer... more
A theoretical and experimental study on the absorption and fluorescence properties of a newly synthesized compound 3,6-bis(4,5-dihydroxyoxazo-2-yl)benzene-1,2-diol in ethanol is reported. Evidence suggesting intramolecular proton transfer in the excited singlet state is presented. All possible tautomeric forms are studied by means of TDDFT B3LYP/6-31G(d,p) in both the ground and the first excited singlet state. On the basis of the results obtained excited state double proton transfer in the title compound is proposed.
Photophysical and photochemical dynamics of ground state and excited state proton transfer reaction is reported for Pyrrole 2-Carboxyldehyde (PCL). Steady state absorption and emission measurements are conducted in PCL. The theoretical... more
Photophysical and photochemical dynamics of ground state and excited state proton transfer reaction is reported for Pyrrole 2-Carboxyldehyde (PCL). Steady state absorption and emission measurements are conducted in PCL. The theoretical investigation is done by using different quantum mechanical methods (e.g. Hartree Fock, DFT, MP2, CCSD etc.). The reaction pathway and two dimensional potential energy surfaces are computed in various level of theory. A transition state is also reported in gas phase and reaction filed calculation. It is established that PCL forms different emitting species in different media. A large Stokes shifted emission band, which is attributed to species undergoing excited state intramolecular proton transfer, is observed in hydrocarbon solvent. Intermolecular proton transfer is observed in hydroxylic polar solvent. Experimental observations yield all possible signatures of intramolecular and intermolecular proton transfer in excited state of PCL. The origins of these signatures have been explained successfully using corresponding quantum mechanical theories.
We obtain an accurate long time solution for the diffusive kinetics of an excited geminate pair dissociating reversibly in solution, where the excited-state lifetimes of the bound and unbound states may be non-equal. We analyze the... more
We obtain an accurate long time solution for the diffusive kinetics of an excited geminate pair dissociating reversibly in solution, where the excited-state lifetimes of the bound and unbound states may be non-equal. We analyze the long-time asymptotic behavior, finding a transition between two types of behaviors. In region A, the excited bound pair decays as t -3/2 exp(-t /t'0), where t'0 is the lifetime of the unbound state. In region AB, the decay is a pure exponential. At the critical value of the parameters where the transition occurs, we find a t -1/2 exp(-t /t'0) decay. These predictions are tested against an exact numerical solution of the corresponding coupled partial differential equations. For region A, we supply an experimental example involving time-resolved excited-state proton transfer from 5-cyano-2-naphthol to dimethyl sulfoxide.