Fishes, Volume 9, Issue 7 (July 2024) – 46 articles

Aquaculture production has been growing consistently over the last few decades to meet the increasing animal protein demand of the human population. However, increased production and rearing intensities raise the challenges of guaranteeing fish health and welfare, which is essential to avoid losses and ensure product quality. Biomarkers can provide insights into the fish’s nutritional, physiological, and health status, and aid in the evaluation of early nutritional and physiological imbalances, distress conditions, and pathological diagnosis. The discovery and validation of biomarkers rely mostly on the use of information provided by different parameters, including biochemical, metabolic, or immunologic, as well as several omics, from genomics and transcriptomics to proteomics and metabolomics. In this review, a summary of the main biomarkers used in aquaculture is provided along with an overview of the main omics technologies available for further biomarker research. This review also highlights the need to develop non-lethal biomarkers that can easily and quickly be measured to provide a prompt response to producers. Full article

Lumpfish are broadly used as biological sea lice removers in Norwegian salmon farming and are mostly produced in hatcheries. To date, there is little systematic documentation on the mortality causes of lumpfish in hatcheries. In the current study, data from 12 selected fish groups from four hatcheries in Norway were collected to understand the challenges and opportunities related to the categorization of mortality causes of lumpfish in hatcheries. This study indicated that a high proportion of lumpfish mortality was categorized by the hatcheries as unspecified. When specified, mortality was primarily assessed as due to fin damage. Our analyses showed that mortality categorized as fin damage correlated with the detection of infectious agents in dead fish, suggesting that mortality was due to infections rather than fin damage. It was not possible to conclude whether infection with pathogens present in the environment caused fin damage or if injuries from aggression were a gateway for pathogens. Furthermore, due to the lack of information regarding production conditions, it was not possible to assess risk factors causing eventual aggression or the presence of pathogens. This study revealed that mortality causality—the chain of events leading to death—is mainly unclear in lumpfish hatcheries because (1) mortality categorization does not focus on underlying causes and (2) there is little documentation of production conditions, making it very difficult to relate mortality rates to external factors. The present findings highlight that there are gaps in the registrations made by hatcheries and that there is an urgent need to implement standardized monitoring protocols for lumpfish hatcheries. This will help identify the causes of mortality and, therefore, allow for the implementation of proper measures that will ensure better survival. Full article

Blue gourami (gourami, Trichogaster trichopterus) is a model for labyrinth fishes (Anabantoidei) adapted to partial air breathing. Its reproductive endocrinology has been extensively studied, and transcriptomic sex differences in the gonads were described. Nevertheless, sex differences in gene expression in non-gonadal tissues ostensibly affected by the sex-specific hormonal balance, e.g., the brain, are unknown. To assess such differences, we used bulk RNA-seq to assemble and compare polyA+ transcriptomes between whole brains of four adult male and five adult female gourami, in addition to other tissues (three dorsal fin and five ovary samples) from the same female group. While all nine brain transcriptomes clustered together relative to the other tissues, they showed separation according to sex. A total of 3568 genes were differentially expressed between male and female brains; of these, 1962 and 1606 showed lower and higher expression in males, respectively. Male brains showed stronger down-regulation of specific genes, which included hormone receptors, e.g., pituitary adenylate cyclase-activating polypeptide receptor (pacap-r1). Among the genes with lower expression in male brains, multiple pathways essential to brain function were over-represented, including GABA, acetylcholine and glutamate receptor signaling, calcium and potassium transmembrane transport, and neurogenesis. In contrast, genes with higher expression in male brains showed no significant over-representation of brain-specific functions. To measure the mRNA levels of specific hormone receptors known from prior studies to regulate reproductive function and behavior in gourami and to validate RNA-seq results for these specific genes, we performed RT-qPCR for five receptors, pacap-r1, gonadotropin-releasing hormone 2 receptor (gnrh2r), kisspeptin receptor 1 (gpαr1/kiss1), insulin-like growth factor 1 receptor (igf1r), and membrane progesterone receptor 1 (mpr1), in the brain RNA sample groups. Of these, pacap-r1 showed a significant, three-fold down-regulation, while gpαr1/kiss1 showed a significant two-fold down-regulation in male vs. female gourami brains. Our results are novel in describing the suppression of brain function-related gene expression in male, as compared to female, gourami brains. Further research is needed to assess the behavioral significance of this effect and its prevalence in other vertebrate groups. Full article

For freshwater or marine fish farming to be successful, live fish must be transported. This can be performed with eggs, larvae, juveniles, and adults. Nonetheless, because of the handling, confinement, and duration of transport, it is considered a difficult procedure. To prevent significant physiological changes that could result in fish mortality, it is crucial to look for ways to reduce stress and enhance the quality of transport water. Consequently, a comprehensive range of research on the use of additives in water, including salt and artificial or natural anesthetics, is presented in this review, which also discusses potential changes in water quality factors during transport, such as dissolved oxygen (DO), carbon dioxide (CO₂), pH, ammonia, and temperature. The usage of stocking densities during transport is also covered in this review, with consideration given to the various recommendations for each species, fish size, and length of transport. Full article

A subarctic Norwegian watercourse is known for its population of threespine sticklebacks (Gasterosteus aculeatus Linnaeus 1758) with unusual pelvic spine polymorphism; the upper lake contains a mixture of specimens that are normal-spined, asymmetric-spined, and spineless. In contrast, the downstream lakes and the nearby marine site contain only the normal spined morph. We investigated the maternal-line genetic structure in the watercourse using mitogenomics. A total of 242 sticklebacks representing two lakes and a marine site were assessed based on individual and pooled DNA sequencing. While two distinct mitogenome clades were detected in the upper lake (Lake Storvatnet), only one of these clades was present in the downstream lake. The marine site pooled DNA sample, however, contained several mitogenome haplotypes. We present mitogenome sequence features that include gene-specific single nucleotide polymorphisms, molecular phylogeny, and genetic differentiation assessments based on pairwise comparisons of pooled population samples from each site. The Lake Storvatnet mitogenomes belong to two distinct Euro-North American (ENA) clades; one of the ancestral lineages likely corresponds to the original maternal lineage in the watercourse, and the other was introduced more recently. We hypothesize that the second invader carried nuclear genomic features responsible for the observed present-day pelvic spine polymorphism in Lake Storvatnet. Full article

The in vitro biotransformation of phenol at 11 °C was studied using pre-spawn adult rainbow (Oncorhynchus mykiss) (RBT), brook (Salvelinus fontinalis) (BKT), and lake trout (Salvelinus namaycush) (LKT) hepatic microsomal preparations. The incubations were optimized for time, cofactor concentration, pH, and microsomal protein concentration. Formation of Phase I ring-hydroxylation and Phase II glucuronidation metabolites was quantified using HPLC with dual-channel electrochemical and UV detection. The biotransformation of phenol over a range of substrate concentrations (1 to 180 mM) was quantified, and the Michaelis–Menten kinetics constants, Km and Vmax, for the formation of hydroquinone (HQ), catechol (CAT), and phenylglucuronide (PG) were calculated. Species differences were noted in the Km values for Phase I enzyme production of HQ and CAT, with the following rank order of apparent enzyme affinity for substrate: RBT > BKT = LKT. However, no apparent differences in the Km for Phase II metabolism of phenol to PG were detected. Conversely, while there were no apparent differences in Vmax between species for HQ or CAT formation, the apparent maximum capacity for PG formation was significantly less in LKT than that observed for RBT and BKT. These experiments provide a means to quantify metabolic activation and deactivation of xenobiotics in fish, to compare activation and deactivation reactions across species, and to act as a guide for future predictions of new chemical biotransformation pathways and rates in fish. These experiments provided the necessary rate and capacity (Km and Vmax) inputs that are required to parameterize a fish physiologically based toxicokinetic (PB-TK) model for a reactive chemical that is readily biotransformed, such as phenol. In the future, an extensive database of these rate and capacity parameters on important fish species for selected chemical structures will be needed to allow the effective use of predictive models for reactive, biotransformation chemicals in aquatic toxicology and environmental risk assessment. Full article

Unlike adult mammalian cardiomyocytes, cardiomyocytes in teleosts display high proliferative capacity throughout adulthood. This study aimed to identify the immunohistochemical profiles of cardiomyocytes and immune cells in the hearts of Molly fish by assessing the immunolabelling expression of key proteins involved in cell proliferation, differentiation, and tissue protection. The cardiac anatomy of Molly fish includes the atrium, ventricle, and bulbus arteriosus. The expression of SOX9, NF-κB, myostatin, and S100 proteins in myocardial cells indicates the proliferative features of the heart in Molly fish. The bulbus arteriosus is characterized by collagenous chambers and smooth muscle cells that express Ach and iba1. The atrium of Molly fish serves as a storage unit for rodlet cells and immune cells. Rodlet cells displayed immunoreactivity to NF-κB, iba1, Olig2, Ach, and S100 proteins, suggesting their roles in the immune response within the heart. Furthermore, telocytes (TCs) have emerged as a significant component of the atrium of Molly fish, expressing Ach, CD68, S100 protein, and iba1. These expressions indicate the involvement of TCs in multiple signaling pathways that contribute to heart architecture. This study delineates the intricate relationship between cardiomyocytes and innate immune cells in Molly fish. Full article

Fish stocks are declining in marine capture coastal fisheries in West Africa. Many observers have blamed climate change and the system of open access for the decline. Open-access fishing encourages too many people to take up fishing, and the result is overfishing of the stocks. According to such critics, this is a classic example of Hardin’s tragedy of the commons, whereby a continuous increase in the number of users of a natural resource eventually leads to the collapse of the resource. The present study, which analysed stakeholders’ perceptions about their open-access fishing in Siera Leone’s marine fisheries, conducted 32 key informant interviews. Our research found that while they perceived that open-access fishing impacted fish stocks, most Sierra Leone’s marine capture fishers did not see open access as a cause of fish decline; instead, they blamed the lack of enforced regulations on the methods and extent of fishing. Accordingly, these fishers favoured the continuation of open access—not least because it helps to alleviate hunger and is a readily available source of protein in Sierra Leone’s coastal communities—but accompanied by strict regulations on both the type of fishing gear used and the quantity, size, and species of fish caught. In other words, they preferred regulated open access to unregulated open access. The central government’s resolve to regulate its fishery will determine whether it will transition from unregulated open access to regulated open access or other forms of OA. This study recommends detailed research into how to influence political will to enforce regulations. Full article

To understand the fish community structure characteristics and changes in Poyang Lake after the Yangtze River fishing ban in 2021, seven sampling stations were established, namely in Hukou, Lushan, Duchang, Yongxiu, Nanjishan, Ruihong, and Poyang, for fishery resource surveys between 2020 and 2021. The results showed that 93 fish species were identified, belonging to 11 orders, 20 families, and 61 genera, which was an increase of 4.5% from before the fishing ban. Of these, 52 Cyprinidae species were identified, comprising the highest proportion (55.91%). Four invasive alien species (hybrid sturgeon, Cirrhina mrigala, Piaractus brachypomus, and Mugil cephalus) were identified, and the number of alien species in Poyang Lake was higher than before the fishing ban. Carnivorous and mid-lower-level fish showed a significant increase, accounting for 47.31% and 38.71% of the total species, respectively. Compared with the Yangtze River before the fishing ban, the body length and body weight of the main economic fish in Poyang Lake increased by 6.10–61.26% and by 15.14–291.57%, respectively. In terms of age structure, the proportion of major economically important fish aged 1 or 2 years decreased significantly, while the proportion of older fish increased substantially. There was little difference in the diversity of fish communities at different stations in Poyang Lake. In terms of biodiversity, the Shannon–Wiener index ranged from 2.158 to 2.909, with Poyang having the highest value and Nanjishan the lowest. Margalef’s index ranged from 4.265 to 6.459, with Lushan having the highest value and Nanjishan the lowest. Pielou’s index ranged from 0.617 to 0.822, with Duchang having the highest value and Nanjishan the lowest. Hence, the Yangtze river fishing ban has played an important and positive role in the restoration of fishery resources in Poyang Lake. However, long-term tracking and monitoring are needed to provide information to comprehensively evaluate the ecological impact of the Poyang Lake fishing ban. Full article

Fish behavior often varies across a species’ distribution range. Documenting how behaviors vary at fringes in comparison to core habitats is key to understanding the impact of environmental variation and the evolution of local adaptations. Here, we studied the behavior of Wels catfish (Silurus glanis) in Lake Möckeln, Sweden, which represent a European northern fringe population. Adult individuals (101–195 cm, N = 55) were caught and externally marked with data storage tags (DSTs). Fifteen DSTs were recovered a year after tagging, of which 11 tags contained long-term high-resolution behavioral data on the use of vertical (depth) and thermal habitats. This showed that the catfish already became active in late winter (<5 °C) and displayed nocturnal activity primarily during summer and late autumn. The latter included a transition from the bottom to the surface layer at dusk, continuous and high activity close to the surface during the night, and then descent back to deeper water at dawn. During the daytime, the catfish were mainly inactive in the bottom layer. These behaviors contrast with what is documented in conspecifics from the core distribution area, perhaps reflecting adaptive strategies to cope with lower temperatures and shorter summers. Full article

Streptococcus agalactiae is a highly invasive bacterium that causes significant economic losses in tilapia aquaculture around the world. Furthermore, it is a pathogen for mammals, including humans, emphasizing its importance in One Health. The aim of this work was to evaluate the evolution of clinical and histopathological lesions caused by acute infection with two serotypes of S. agalactiae. For this, two strains isolated from natural outbreaks in Brazilian aquaculture farms (S13, serotype Ib; S73, serotype III) were used to challenge juvenile Nile tilapia (Oreochromis niloticus) intraperitoneally. Target organ samples were collected ten times, between 1 and 96 h post-infection, for microbiological and histopathological analyses. Anorexia was the first clinical sign and the first death occurred at 24 and 30 h in the fish infected with strains S13 and S73, respectively. Serotype Ib initially caused more pronounced lesions in the nervous system; however, serotype III lesions progressed more aggressively, reaching the same severity as those of serotype Ib. This trend was repeated in the mortality curve after 32 h. These results elucidated the important stages in the pathogenesis of S. agalactiae serotypes Ib and III in tilapia and suggest “tips and tricks” to improve the positive culture rate in the clinical diagnosis of infections in some tissues. Full article

This study delves into the realm of competitive sport fishing in Greece’s inland waters, where recent years have witnessed a notable surge in such activities. Despite the absence of official records, insights into the sport’s trend and the motivations and socio-demographic characteristics of anglers participating in fishing competitions were gleaned from digital data sourced from online platforms and interviews with anglers. Our findings illuminate the growing popularity of sport fishing in Greece, evident in the increasing number of fishing competitions and the burgeoning angling community. Predominantly male, anglers exhibit a strong dedication to catch-and-release practices, citing relaxation and socialization as primary motivations, with competitive aspirations also shaping their involvement. Moreover, the study highlights legislative gaps in inland water fisheries regulations, underscoring the need for updates to ensure sustainable management and to mitigate illegal activities. Additionally, there exists an opportunity to bolster anglers’ ecological awareness through targeted education initiatives. Ultimately, addressing these conclusions holds the potential to foster responsible fishing practices and contribute to the long-term sustainability of inland water fisheries. Full article

Mesopelagic fishes hold an important position in marine food webs, serving as a link between lower trophic levels and top predators and transferring energy from their deep mesopelagic habitat to shallower oceanic layers. Despite their ecological importance, research on mesopelagic fishes’ diet and feeding habits in the Mediterranean Sea is far from thorough. The present work attempts to assess the preying patterns and diet composition of four myctophid (Benthosema glaciale, Ceratoscopelus maderensis, Myctophum punctatum, Notoscopelus elongatus) and two sternoptychid (Argyropelecus hemigymnus, Maurolicus muelleri) species from the Corinthian Gulf (Ionian Sea, Greece), sampled during pelagic trawl surveys in 2018 and 2019. Stomach vacuity was high for myctophids caught during daytime, a pattern which sternoptychids did not follow. Estimated trophic indices revealed high dietary diversity (Shannon’s H’ index) for most investigated species, but a narrow trophic niche breadth (Levins’ normalized B_n index). Copepods and various marine crustaceans were dominant in all diets, classifying them under the zooplanktivorous trophic guild, while A. hemigymnus exhibited high concentrations of particulate organic matter in their stomachs and N. elongatus exhibited a higher consumption of fish. Diet overlap was significant among most studied mesopelagic species, as indicated by Shoener’s S index and confirmed by both a multidimensional scaling ordination and a hierarchical cluster analysis. Information on mesopelagic fishes’ diet composition in this poorly studied part of the Mediterranean is useful in further assessing and parameterizing marine food webs and midwater trophic interactions, as well as in quantifying the ensued energy transfer to top predators of commercial interest or conservation concerns. Full article

As a member of the pattern recognition receptor (PRR) class, scavenger receptor class B type 1 (SRB1) plays a key role in innate immunity. Grass carp (Ctenopharyngodon idellus) ranks among the most extensively cultivated freshwater aquaculture species in China. However, little is known about the function of SRB1 in C. idellus. In this research study, a SRB1 gene was identified in C. idellus, named CiSRB1. The full-length cDNA of CiSRB1 is 2486 bp long, with an open reading frame (ORF) of 2486 bp encoding a 497 amino acid (aa) protein containing a conserved CD36 domain. The identified genomic DNA length of CiSRB1 is 20,042 bp, including 12 exons and 11 introns. The predictive analysis of protein interactions revealed that CiSRB1 could interact with the outer capsid proteins of typical GCRV strains. The tissue distribution of CiSRB1 exhibited age-dependent characteristics. CiSRB1 displayed the highest expression in the intestines and moderate levels in muscle, spleen, liver, and brain of one-year-old grass carp while maintaining relatively low levels in three-year-old grass carp. Following grass carp reovirus (GCRV) infection, notable upregulation of CiSRB1 transcripts was observed in major immune tissues (gills, intestines, spleen, and liver). Furthermore, significant differences were found between one-year-old and three-year-old grass carp, with lower CiSRB1 expression levels being detected in the older group. Additionally, a distinct response to GCRV infection was observed in one-year-old and three-year-old grass carp. It was found that one-year-old individuals had a mortality rate of up to 84% 6 days post-infection (dpi), whereas all three-year-old counterparts survived after GCRV infection. The analysis of GCRV copy numbers across tissues revealed substantially higher levels in one-year-old grass carp compared with their older counterparts, confirming the existence of age-dependent susceptibility to GCRV infection in grass carp. Combined with these results, it was speculated that the decline in cell-surface CiSRB1 expression with age may impede reovirus binding to host cells, potentially explaining why older grass carp demonstrated enhanced resistance to GCRV infection. This observation accentuates the importance of CiSRB1 in the context of GCRV infection and provides insights into age-dependent susceptibility to reovirus. Full article

Wild fish are preferred by consumers primarily for their superior sensorial qualities, including taste and texture. However, their limited availability often results in higher prices. Considering this, we explored the possibility of enhancing the quality of earthen pond aquaculture fish by transferring them to a near wild environment. This study investigated how rewilding time affects the physical properties, nutritional composition, and volatile profile of grass carp muscle. The results showed that compared to the 0M group, the crude protein content in grass carp muscle did not change significantly (p > 0.05) as the rewilding time increased to 6 months. Meanwhile, the significant increase in hardness and springiness (p < 0.05) indicated that the textural characteristics of muscle, which were key sensory and physical indices of muscle quality, were improved. Although the 6M group showed a 58.93% reduction in crude fat content compared to the 0M group, it retained the highest docosahexaenoic acid (DHA) content. Sensory evaluation demonstrated that as the rewilding time increased, the fishy and grassy odors of the rewilding grass carp diminished. Furthermore, cluster heatmaps and partial least squares discriminant analysis (PLS-DA) revealed that cultured grass carp and rewilding grass carp at three time points exhibited differences in various indicators. The variable importance in projection (VIP) showed that volatile flavor compounds (acetone, propionaldehyde-D, 1-penten-3-ol) and hardness were key factors in distinguishing between them. Therefore, extending the rewilding time can potentially enhance the acceptability of cultured grass carp by improving the physical properties, nutritional quality, and volatile profile of the muscle. This approach may provide a new pathway for fish aquaculture. Full article

This study presents an extensive evaluation of the contamination levels in fish, mollusks, water, and sediments in the Black Sea over eight years, from 2016 to 2023. The primary aim was to determine the concentrations and distribution patterns of heavy metals (HMs), polychlorinated biphenyls (PCBs), polycyclic aromatic hydrocarbons (PAHs), and other persistent organic pollutants (POPs) in fish, water, and sediments of the Black Sea, and their implications for marine ecosystem health and human safety. Data were collected through scientific cruises and the methodology involved systematic sampling across different regions of the Romanian Black Sea, followed by rigorous laboratory analyses to identify and quantify the presence of contaminants. The study also examined the temporal trends of these pollutants, providing insights into their sources, pathways, and persistence in the marine environment. Additionally, the research assessed the bioaccumulation of contaminants in various biota, offering a critical perspective on food safety and potential risks to human consumers. The findings revealed significant spatial insights, highlighting areas of concern that require immediate attention and action. Notably, industrial discharge, agricultural runoff, and historical pollution hotspots were identified as major sources of contamination. This research underscores the need for enhanced monitoring and regulatory frameworks to mitigate pollution sources and safeguard the Black Sea ecosystem, advocating for sustainable practices and effective management strategies to preserve marine resources in the Black Sea. Full article

Aquaculture chemotherapeutants used to control sea lice in finfish aquaculture can disperse into the marine habitat and have the potential to affect non-target species like crustaceans. Some of the compounds used (especially in Canada) include in-feed drugs such as emamectin benzoate (EMB), and ivermectin (IVER), as well as bath pesticides such as azamethiphos (AZA) and hydrogen peroxide (HP). Despite the paucity of data, crustacean life cycle stages appear to have varying sensitivities to these compounds. This data review sets out to examine the intraspecies variation in sensitivity within life stages for lobster (Homarus) and prawn (Pandalus) species. Despite limited information, it appears that prawn eggs, adults, and juveniles are less sensitive to AZA and EMB compared with larvae, whereas for lobster the opposite is true: adults and juveniles are more sensitive than larvae to AZA (there was insufficient data to assess EMB). For HP, the sensitivity of prawn eggs appears comparable to larvae, but hatching success data suggest that this important stage of development is less impacted than eggs themselves as indicated by one study. These differences are important considerations for toxicity threshold determination processes and risk assessments, which ideally are environmentally relevant, and highlight the need for more data. Full article

The present study aimed to explore whether water flow velocity could affect the swimming ability and overall energy metabolism of wild Amur grayling (Thymallus grubii). Swimming performance was assessed by measuring critical swimming speed (U_crit), burst speed (U_burst), and oxygen consumption rate (MO₂) based on the stepped velocity test method. Our results showed that the absolute values of U_crit and U_burst tended to increase with body length. In contrast, the relative values of U_crit and U_burst tended to decrease and increase, respectively. MO₂ in Amur grayling was elevated with increasing velocity, suggesting relatively high swimming efficiency. We also measured the biochemical indices related to energy metabolism. Lactate dehydrogenase, hexokinase, and pyruvate kinase activities significantly increased (p < 0.05). Hepatic glycogen, glucose, and muscle glycogen contents decreased with the increasing trend of velocity (p < 0.05), the lactic acid contents of the blood and muscles increased significantly with the increase in velocities (p < 0.05), and changes in creatine phosphate content showed no significant difference (p > 0.05). The results not only denote the relationship between body size and swimming speed but also show the effects of water flow velocity on energy metabolism in Amur grayling. The results provide basic data for the construction of fish passage. Full article

Background: This study was part of a larger comprehensive project (BIOACID) addressing the physiological resilience of Polar cod, Boreogadus saida, to ocean acidification and global warming and aimed to unravel underlying molecular mechanisms of the observed physiological responses. Methods: Fish were acclimated long-term to three CO₂ concentrations comprising control conditions (390 ppm) and two projected climate scenarios (780 ppm and 1170 ppm). Each CO₂ treatment was combined with four temperatures: 0, 3, 6, and 8 °C. Here, we focused on the hepatic transcriptomic profiles from these previously physiologically characterized fish. Results: Generally, we did not detect signs of a classical stress response. Consistent with functional observations, warming induced much stronger molecular responses compared to elevated PCO₂, but an interaction between both factors existed to some extent. Gene ontology analysis revealed a strong response in lipid, amino acid, and protein metabolism. With increasing temperature, we observed a shift away from lipid metabolism, while carbohydrate metabolic pathways remained stable. Conclusions: Although we found Polar cod to be quite resilient to ocean acidification, temperature will remain a critical parameter for this valuable Arctic keystone species, and the question remains as to whether the observed acclimation strategies can be implemented in its natural habitat, especially when food supply is limited. Full article

This study presents new records of three Critically Endangered angel shark species (Family: Squatinidae) occurring in the Eastern Mediterranean—Smoothback Angelshark S. oculata Bonaye, 1840, Sawback Angelshark S. aculeata Cuvier, 1829, and Angelshark S. squatina (Linnaeus, 1758). The supporting data serves to highlight three potential Critical Angel Shark Areas (CASAs) in Türkiye: Fethiye Bay, Çanakkale Strait (i.e., Dardanelles), and Antalya Bay. These data also demonstrate that female S. oculata may mature at a smaller size than prior published estimates of length at first maturity. This new dataset provides details of 23 S. squatina specimens, 52 S. oculata specimens, and 5 S. aculeata specimens, totalling 80 recent angel shark specimens found in Turkish waters mostly sent to us from small-scale fishers who had incidentally caught angel sharks. Also presented are four capture-induced parturition events in Turkish waters onboard fishing vessels, thus providing details on internal yolk sacs, reproductive habitats, and indications of spawning season. Our dataset presented here spans from 2018 to 2023 and suggests that mature adults of S. squatina and S. oculata still occur in Turkish waters, in Fethiye Bay and Çanakkale, respectively. Due to elevated chances of fishers encountering Critically Endangered angel sharks in Türkiye, we suggest that fishers are trained in handling and safe-release methods, to ensure reduced incidents of capture-induced parturition, and improved post-release survival. This study demonstrates that bottom set nets set by small-scale fishers pose less risk to mortality for angel sharks as they are almost always encountered alive after a usual 12 h soak time, suggesting that bottom trawling in critical habitats should be better regulated (or phased out) to help improve national angel shark conservation initiatives. Full article

The objective of this study was to investigate the effects of salmon gonadotropin releasing hormone analog (S-GnRH-A) and human chorionic gonadotropin (HCG) on the serum levels of gonadotropins (GtHs) and sex steroid hormones in Manchurian trout during sexual maturity. Females in the treatment group were injected with 20 µg/kg S-GnRH-A and 400 IU/kg HCG, whilst males were injected with half the amount. Blood samples were collected at 0, 5, 10, and 20 days post injection (dpi). The results showed an increase in female follicle-stimulating hormone (FSH) levels in the treatment group at 5 dpi, and from 5 dpi onwards, a difference was observed between the groups, with higher FSH levels in the treatment group compared to the control group. In males, FSH levels showed group differences at only 5 dpi (p < 0.05) and were higher in the treatment group. In females, luteinizing hormone (LH) peaked at 10 dpi in the treatment group, and there were differences between the two groups at 10 dpi and 20 dpi. In males, LH was significantly higher in the treatment group than in the control group at 5 dpi and 10 dpi (p < 0.05). In females, estradiol (E2) was significantly higher in the treatment group than in the control group at 5 dpi and 10 dpi (p < 0.05), whereas in males, the difference between the two groups was only observed at 5 dpi (p < 0.05). The female testosterone (T) level in the treatment group was significantly higher than that of the control group at 5 dpi and 10 dpi (p < 0.05), while T levels were significantly higher in the male treatment group than in the control group at 5 dpi (p < 0.05). The level of 17α–hydroxyprogesterone (17α-OHP) in the females of the treatment group was significantly higher than that of the control group at 5 dpi and 10 dpi (p < 0.05), and 17α-OHP levels were significantly higher in the male treatment group than in the control group at 10 and 20 dpi (p < 0.05). The fish were successfully spawned after S-GnRH-A and HCG injections, and brood amount, fertilization rate, and hatching rate were significantly increased (p < 0.05). This study provides a framework for a better understanding of the mechanisms of exogenous hormone-mediated control of reproduction in Manchurian trout. Full article

Morphine, a drug of abuse used to treat moderate-to-severe pain, elicits its actions by binding to the opioid receptors. Cocaine is an example of a recreational drug that inhibits dopamine reuptake. The molecular effects of morphine and cocaine have been described in different specific brain regions. However, the systemic outcome of these drugs on the whole organism has not been fully addressed. The aim of this study is to analyse the global effects of morphine (10 μM) and cocaine (15 μM) in the expression of proteins related to the reward pathway. Zebrafish embryos were exposed to these drugs from 5 hpf (hours post-fertilisation) to 6 dpf (days post-fertilisation). Dopamine levels were determined by ELISA, and the expression of Fos proteins, Creb, its activated form p-Creb and tyrosine hydroxylase (Th) were examined by Western blot. Both drugs decreased Th levels at 72 hpf and 6 dpf and modified the expression of Fos family members, pCreb and Creb in a time-dependent manner. Morphine and cocaine exposure differentially modified dopamine levels in 72 hpf and 6 dpf zebrafish embryos. Our results indicate that drugs of abuse modify the expression of several proteins and molecules related to the activation of the reward pathway. Full article

In this study, we employed geometric morphometrics (GMs) to analyze the shell shape differences among two mass-selected strains of bay scallops (red shell strain (RS) and black shell strain (BS)) and a control group (CG). The results revealed distinct shell shape differences corresponding to shell coloration, with the black shell strain displaying a more elliptical shell compared to the red shell strain. Additionally, the umbonal angle of the red shell strain was smaller than that of the black shell strain, indicating that the black shell strain had a more favorable jet direction that could enhance swimming capabilities. To evaluate the model’s performance in practical applications, leave-one-out cross-validation was carried out on the two shell strains and one control group. The results demonstrated discrimination accuracy rates of 67.44%, 47.62%, and 68.18% for the BS strain, RS strain, and CG, respectively. Similarly, for the right valves, the discrimination accuracy rates were 62.79%, 50.00%, and 75.00% for the BS strain, RS strain, and CG, respectively. Full article

The digital economy plays an important role in promoting the high quality and sustainable development of the marine fishery economy. Based on the panel data of the digital economy and marine fishery development from 2011 to 2022, we firstly adopted the entropy method to comprehensively evaluate the economy quality level of the digital economy and marine fishing. Secondly, we constructed a two-way fixed effect model to empirically analyze the impact of digital economy development on the marine fishery economy quality and the mediating role of marine green science and technology innovation, and further explored the regional heterogeneity of the digital economy on the marine fishery economy quality. Several findings emerge. The digital economy and the marine fishery economy quality level was relatively low and showed a fluctuating increase. The development of the digital economy can significantly improve the economy quality of marine fishing, and the conclusion was still valid after considering a series of robustness tests. The digital economy can drive the development quality of the marine fishery economy through marine green technology innovation. This paper proposes fostering the advancement of digital technology in the marine fishery sector, to effectively harness the innovation-driven potential of the digital economy, so as to facilitate the harmonious development of both the marine and digital economies. Full article

The feedback regulatory effects of estrogen (E2) and androgen (T) on the gonadotropin-releasing hormone (GnRH) and gonadotropin (GtH) within the brain–pituitary–gonad (BPG) axis in eels with undeveloped ovaries were investigated through in vivo studies. However, the regulatory role of the BPG axis only became apparent during ovary development in the migratory stage. To further elucidate the direct feedback regulation of the BPG axis, female Anguilla japonica underwent artificial induction of vitellogenesis, and the regulation of BPG axis tissues by GtH (human chorionic gonadotropin, hCG), E2, and T was explored through in vitro exposure. The mRNA expression levels of GnRH (mGnRH), GtH (fshb and lhb), and steroid biosynthesis enzymes (cyp11a1, hsd3b, cyp17a1, and cyp17a2) in the diencephalon, pituitary, and ovary, respectively, were determined. The results showed that the expression level of mGnRH in the diencephalon was significantly downregulated by 0.1 IU/mL hCG but upregulated by both 1 nM E2 and higher concentrations of T, suggesting a direct positive feedback regulation of E2 on mGnRH. In the pituitary, the expression levels of fshb and lhb were upregulated by E2, while fshb was suppressed by T. In the ovaries, the expression of cyp11a1 and hsd3b was upregulated by 1 nM E2, whereas T exposure resulted in an opposite effect. Cyp17a1 mRNA levels did not differ significantly with E2 treatment but were upregulated by 1 nM T. These findings suggest that low concentrations of E2 exhibited positive feedback regulation on all three levels (diencephalon, pituitary, and ovary) of the BPG axis, while T showed weaker and differential feedback regulation in BPG axis tissues. Overall, this study’s results revealed the direct feedback regulation of hCG, E2, and T on the BPG axis in eels, a phylogenetic base of teleosts. Full article

Microbial communities have been documented as playing many pivotal roles, and contributing to the growth or health performance of animal hosts. Thus, many studies are currently looking for potential beneficial bacteria “probiotics” from diverse environments, including wild species. The present study aimed to investigate the diversity and potential metabolic functions of bacterial communities in the gastrointestinal tract of wild spiny lobsters. The gastrointestinal (GI) tracts of two wild lobster species (Panulirus ornatus and Panulirus homarus) were dissected aseptically and analyzed through high-throughput sequencing, followed by PICRUSt analysis. The results exposed that the most dominant phyla inhabiting both lobster species at the post-puerulus and juvenile stages were Proteobacteria, Firmicutes, Bacteriodota, Patescibacteria, and Verrucomicrobiota, while at the genus level, the GI tracts were mostly dominated by Photobacterium, Candidatus Bacillopora, Vibrio, and Catenococcus at the post-peurulus stage, and Vibrio, Catenococcus, Acanthopleuribacter, Acinetobacter, Pseudoalteromonas, Grimontia, and Photobacterium at the juvenile stage. Further metagenomic prediction analysis discovers many potential probiont properties indicated by the detection of marker genes corresponding to many important metabolic activities, such as antimicrobial compounds (streptomycin, vancomycin, carbapenem, tetracycline, novobiocin, penicillin, cephalosporin, ansamycines, butirosin, and neomycin), antioxidants (e.g., flavonoids and carotenoids), and several important digestive enzymes (e.g., lipase, protease, and amylase). These results suggest that GI tracts of wild spiny lobsters are potential sources to discover novel probionts for aquaculture purposes. Further studies, such as the isolation of the natural product-producing bacteria, or cloning of the beneficial compound-identified genes, are highly recommended to develop novel probiotic strains for aquaculture purposes. Full article

In this study, we added LDN-193189 2HCL to inhibit the BMP signaling pathway in Scylla paramamosain and then explored the function of this pathway in molting through the changes in the growth performance and molt-related gene expression. The study findings indicated that the expression of ACVR1, BMPRIB, and Smad1 in Scylla paramamosain was suppressed when the LDN-193189 2HCL concentration in the culture water was 2 µm/L. Subsequently, following a 30-day experiment, there was a significant reduction in the molting frequency, growth rate, and body size of the S. paramamosain larvae. An analysis of the BMP pathway gene expression during the molting phase revealed that the BMP2, BMPR2, and Smad1 genes displayed cyclic expression patterns, while ACVR1, BMP7, and BMPRIB maintained consistent expression levels throughout the molting cycle. Additionally, the expression levels of BMP2, BMPR2, and Smad1 in the inhibition group were significantly lower compared to those in the control group. Furthermore, the inhibition of the BMP pathway led to an increase in the expression of MIH during the intermolt period and a decrease in the expression of EcR during the premolt period. These findings demonstrate that the BMP signaling pathway affects the molting of Scylla paramamosain juvenile crabs by influencing the expression of the critical genes MIH and ECR during molting, offering valuable data for functional research on the BMP signaling pathway in crustaceans. Full article

Climate change has led to significant fluctuations in marine ecosystems. As a component of the food web, the trophic diversity and spatiotemporal changes of fish communities are crucial for understanding ecosystems. In recent years, stable isotope analysis has been increasingly used as a comprehensive tool for quantitative assessment of trophic diversity to explore spatiotemporal variations in fish community diversity. This study is based on carbon ($\delta$¹³C) and nitrogen ($\delta$¹⁵N) stable isotope analysis using different biomass-weighted isotope diversity indices, including isotopic divergence index (IDiv), isotopic dispersion index (IDis), isotopic evenness index (IEve), and isotopic uniqueness index (IUni). The overall results indicate that IDis, IEve, and IUni values of fish communities were relatively low, while IDiv was relatively high in the Haizhou Bay ecosystem. IDiv, IDis, IEve, and IUni were lower in autumn than in spring; IDiv and IDis were relatively higher in offshore waters, while IEve and IUni were relatively higher in inshore waters. The changes in species composition and intensive pelagic–benthic coupling in Haizhou Bay may lead to significant spatiotemporal variations in the trophic diversity of fish communities in the area. These findings highlight the importance of incorporating trophic relationships into ecosystem models, which will help to enhance our understanding of the complexity of the trophic structure of fish communities. Full article

Fish possess lipases from embryonic development to adulthood. Lipase activity methods vary and significantly differ in terms of the concentration of the substrate used, bile salt, Ca²⁺, temperature, pH, and type of lipase units, which limits comparative studies. The three most-used substrates are p-nitrophenyl (p-NP), β-naphthyl (β-N) derivates, and emulsified natural oils. These were selected to be redesigned in this study to measure lipase activity under temperature, pH, ion, and bile salt conditions closer to fish physiology, using the appropriate molar absorption coefficient to calculate the lipase units. Cynoscion parvipinnis (CP), Seriola rivoliana (SR), Centropomus viridis (CV), Elop affinis (EA), and Canthidermis maculate (CM) pyloric caeca-intestine extracts were studied. Sodium taurocholate showed the highest activity for intestinal lipases, and the fatty acid length in the substrates changed the lipase hydrolysis rate. The highest lipase activity was obtained with p-NP butyrate and p-NP caprylate in four fish species. Lipase activity was highly activated with Ca²⁺ (4–7 mM). The β-N absorption spectrum indicates a plateau between 534 and 554 nm for fish lipases. Salmon oil was identified as the most digestible lipid in the four fish species using the in vitro digestibility assay. The lipase zymogram showed an apparent size of 46.3 kDa for CP, 40.2 kDa for SR, 46.2 kDa for CM, 106.6 kDa for EA, and 58.3, 84.6, and 162.1 kDa for CV. Full article

The Yangtze River floodplain is an area with an extremely rich diversity of fish species. Poyang Lake, as an important part of this river–floodplain system, is a crucial habitat for the survival of fish. However, prolonged human activities, such as environmental pollution and hydroelectric development, have degraded the habitat in the Poyang Lake Basin, posing threats to fish populations. Understanding genetic diversity is crucial for maintaining fish populations and understanding their dynamics. The genetic diversity of Hemiculterella wui, an economically endemic species in China of subfamily Cultrinae (Cypriniformes: Cyprinidae), has been understudied. This study investigated the genetic diversity and structure of H. wui populations from the Ganjiang, Xinjiang, Fuhe, and Raohe rivers in the Poyang Lake Basin using mitochondrial Cytb gene analysis. Results showed high haplotype diversity but low nucleotide diversity in H. wui’s Cytb sequences. Analysis of molecular variance (AMOVA) showed no significant geographic genetic structure among populations. Haplotype network analysis revealed no clear geographical clustering. Neutrality tests and haplotype nucleotide mismatch distribution indicated that all populations had experienced expansion events. These findings suggest that H. wui in Poyang Lake does not show a distinct geographic structure. However, it is still necessary to monitor the genetic characteristics of H. wui to maintain the genetic diversity of fishes in Poyang Basin, considering the threat of habitat loss and fragmentation to the population. Full article