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Antisense RNA Technology and Its Applications

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Antisense RNA Technology and its Applications

There are certain disorders like cancer, parasitic and viral infections,
which cause excessive production of specific proteins in day to day life. An
alternative treatment for these disorders is known as Antisense
Technology. A single stranded RNA that is complementary to messenger
RNA (mRNA) is referred to as Antisense RNA. The antisense therapy
includes inhibition of translation by using single stranded
nucleotide, any DNA or RNA sequences or even synthetic ones.
From the practical point of view, most of the antisense therapies work
efficiently and produce best results if used with RNA since RNA specifically
binds to target mRNA and blocks protein synthesis.

Antisense technology was also referred as Gene Subtraction, but it is
proven to be a misnomer as this technology does not remove gene, rather
it just involves inactivation of the gene. Naturally occurring mRNA
antisense mechanism is thehok/sok system in E.Coli R1 plasmid.

The antisense technology is carried out on the basis of the
principle that the cloned gene is ligated into the vector in reverse
orientation. Now, as the antisense technology obstructs the mechanism
of translation it is stoichiometric in nature, and it can prevent synthesis
of the product of the gene that it directs against. The antisense RNA
mechanism involves hybridization of the antisense and sense copies of
RNA. Now, as the ds-RNA molecule is formed, it rapidly degrades by
ribonucleases and the expression is blocked. Another reason could also be
the antisense RNA preventing ribosomes to bind to the sense strand. In
simpler words, if an oligonucleotide is introduced into the cell, it binds to
specific mRNA which forms an RNA dimer in the cytoplasm and halts the
translation mechanism; this is because the mRNA no longer has access to
ribosome and dimeric RNA is rapidly degraded by ribonuclease which in
turn on introduction of oligonucleotide complementary to mRNA leads to
blockage of translation by particular gene, turning off the gene.

RNAi (RNA interference) and Antisense RNA technology though has the
same effect but their mechanisms are quite different. Firstly, RNAi
technology involves degradation of mRNA by small interfering RNAs
triggering catalytic gene silencing; whereas in Antisense RNA technology
mRNA is degraded by RNase H. Secondly, in comparison to antisense
RNA, RNAi are twice larger.

The application of Antisense RNA technology :

This technology was used in Flavr Savr, for tomato ripening;
ripening in tomato produces enzyme Polygalactourodase (PG) which
softens tomatoes and finally rotten them quickly. Two biotechnology
companies: Calgene, USA and ICI Seeds, UK introduced a gene in
plant which synthesizes a complementary mRNA to PG gene and
inhibites the synthesis of PG enzyme delaying over ripening and
rotting.
Antisense therapy is considered for treating certain genetic
disorders and infections. This is also referred to as Gene
Therapy. It includes: isolation of specific gene; its cloning and
inserting it into target tissue cells to make desired protein. It has to
be ensured that the gene is expressed correctly and sufficiently
without causing harm to patient in context with the immune
response.
Antisense RNA technology is also used for cancer therapy. This
therapy is used for treating brain cancer malignant glioma and
cancer of prostate gland, in malignant glioma IGF-I was over
produced and in the prostate cancer IGF-IR was synthesized more.
These two were used to block the translation. Research is carried on
in regard with Antisense RNA drugs for treatment of CMV, HIV,
cancer, etc.
Antisense antiviral drug named Formivirsen is developed to
treat CMV, which was licensed by FDA in August 1998. In 2010,
scientist at NIPGR by using Antisense technology developed tomato
which could last longer for more than 30 days by silencing two
genes (alpha - man and beta hex) which causes softening and
wrinkling in tomatoes during ripening process.
Looking at the advancements in the Antisense RNA technology, it
has potentials for development of pharmacological agents, studying
physiological and pathological processes as well as its use in
effective treatment as gene therapy.

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