PWJohn
PWJohn
PWJohn
php
P Statistical Design
and Analysis
of Experiments
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Statistical Design
and Analysis
of Experiments
Peter W. M. John
University of Texas at Austin
Austin, Texas
51IITL.
Society for Industrial and Applied Mathematics
Philadelphia
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
SIAM's Classics in Applied Mathematics series consists of books that were previously
allowed to go out of print. These books are republished by SIAM as a professional service
because they continue to be important resources for mathematical scientists.
Editor-in-Chief
Robert E O'Malley, Jr., University of Washington
Editorial Board
Richard A. Brualdi, University of Wisconsin-Madison
Herbert B. Keller, California Institute of Technology
Andrzej Z. Manitius, George Mason University
Ingram Olkin, Stanford University
Stanley Richardson, University of Edinburgh
Ferdinand Verhuist, Mathematisch Instituut, University of Utrecht
Classics in Applied Mathematics
C. C. Lin and L A. Segel, Mathematics Applied to Deterministic Problems in the Natura!
Sciences
Johan G. F. Belinfante and Bernard Kolman, A Survey of Lie Groups and Lie Algebras with
Applications and Computational Methods
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Contents
Preface
xi
x111
xxiii
Chapter 1. Introduction
1.1 The Agricultural Heritage
1.2 An Example of an Experiment
1.3 Tests of Hypotheses and Confidence Intervals
1.4 Sample Size and Power
1.5 Blocking
1.6 Factorial Experiments
1.7 Latin Square Designs
1.8 Fractional Factorials and Confounding
1.9 Response Surfaces
1.10 Matrix Representation
2
3
5
7
8
10
12
12
14
14
17
2.1
2.2
2.3
2.4
2.5
2.6
2.7
2.8
2.9
17
18
19
19
20
21
22
23
26
Introduction
Linear Models
Distribution Assumptions
The Method of Least Squares
The Case of Full Rank
The Constant Term and Fitting Planes
The Singular Case
Pseudo-Inverses and the Normal Equations
Solving the Normal Equations
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
vi
Contents
2.10 A Theorem in Linear Algebra
2.11 The Distribution of Quadratic Forms
2.12 The Gauss-Markoff Theorem
2.13 Testing Hypotheses
2.14 Missing Observations
28
29
34
35
37
3.1 Analysis of the Completely Randomized Experiment
3.2 Tukey's Test for Treatment Differences
3.3 Scheff's S Statistic
3.4 A Worked Example
3.5 Qualitative and Quantitative Factors and Orthogonal Contrasts
3.6 The Gasoline Experiment (Continued)
3.7 The Random Effects Model
3.8 The Power of the F Test with Random Effects
3.9 Confidence Intervaas for the Components of Variance
3.10 The Gasoline Experiment (Continued)
3.11 The Randomized Complete Block Experiment
3.12 The Gasoline Experiment (Continued)
3.13 Missing Plots in a Randomized Complete Block Design
3.14 The Analysis of Covariance
3.15 Analysis of Covariance for the Randomized Complete Block Design
39
41
45
45
46
48
52
52
53
54
54
55
58
59
60
63
66
66
68
70
73
75
76
77
80
81
86
86
87
88
92
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Contents vii
5.5
5.6
5.7
5.8
5.9
94
96
98
101
102
105
6.1
6.2
6.3
6.4
6.5
6.6
6.7
6.8
106
108
110
111
114
115
117
120
Analysis
Limitations of the Model
Graeco-Latin Squares
Sets of Orthogonal Latin Squares
Experiments Involving Several Squares
Change-Over Designs
Change-Over Designs Balanced for Residual Effects
Designs for Experiments with Residual Effects
123
124
127
130
132
134
136
137
139
140
143
144
144
145
148
8.1
8.2
8.3
8.4
8.5
8.6
8.7
149
151
152
153
155
157
158
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
viii Contents
173
177
3n Designs
Latin Squares as Main Effects Plans
9.3 3n - k Fractions with Interactions
9.4 Orthogonal Main Effects Plans
9.5 The Plackett and Burman Designs
9.6 Addelman's Designs
9.7 Fractions of 2m3 n Designs of Resolution V
9.8 Two Nonorthogonal Fractions of the 43 Design
9.1
9.2
159
161
163
165
167
167
170
172
178
179
181
184
185
187
190
191
193
194
10.5
196
198
201
204
206
208
209
211
213
213
219
11.1
11.2
11.3
11.4
220
216
221
223
226
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Contents ix
227
230
230
233
233
235
238
242
242
245
248
250
252
253
254
255
255
256
259
260
262
265
12.1
12.2
12.3
12.4
12.5
12.6
12.7
12.8
12.9
12.10
268
13.1
13.2
13.3
13.4
13.5
13.6
13.7
13.8
13.9
13.10
270
271
274
275
276
277
281
282
283
286
Chapter 14. The Existence and Construction of Partially Balanced Designs 288
290
291
292
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Contents
14.4
14.5
14.6
14.7
14.8
14.9
Singular Designs
Semiregular Designs
Regular Designs
Designs with the Triangular Scheme
The Nonexistence of Some Triangular Designs
Designs for the Latin Square Scheme
293
293
295
301
305
305
310
Geometric Designs
Latent Roots of the Intrablock and Interblock Matrices
Cyclic Association Schemes
Partially Balanced Association Schemes with Three Associate
Classes
15.5 The Hierarchic Group Divisible Scheme
15.6 The Rectangular Scheme
15.7 The Cubic Scheme
15.8 The Triangular Scheme for m = 3
15.9 The LS3 Association Scheme
15.10 Cyclic Designs
15.11 Generalized Cyclic Designs
15.12 Designs for Eight Treatments in Blocks of Three
15.13 Conclusion
310
312
315
316
317
318
319
320
321
322
324
325
327
329
Matrices
Orthogonality
Quadratic Forms
Latent Roots and Latent Vectors
Simultaneous Linear Equations
329
331
332
332
335
15.1
15.2
15.3
15.4
A.1
A.2
A.3
A.4
A.5
Bibliography
339
Index
351
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Preface
This book, about the design of experiments, is for the mathematically oriented
reader. It has grown primarily from courses that 1 have given during the past
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xii Preface
From a practical standpoint, many readers will find the second chapter more
difficult than those that follow it. Unfortunately, this can hardly be avoided,
whether one uses Cochran's theorem or Scheff's geometric approach.
The choice of topics for a one-year course will vary with the interests of the
instructor and the mathematical abilities of the students. The first twelve chapters
are of interest to researchera and form the basis of a one-year course, with the
chapter on Latin squares coming either at the end of the first semester or at the
beginning of the second. This allows the first semester to be devoted to analysis of
variance and the complete factorial experiment. The second semester then
contains 2n and 3n designs, fractional factorials, response surfaces, and incomplete
block designs.
The last three chapters call for considerably more mathematical maturity than
the others, and it is not necessary that the practitioner of experimental design
read them. They take the reader to the frontier of research in the construction of
incomplete block designs, and a course for graduate students with a theoretical
emphasis should include some of these topics. Alternatively, I have sometimes
used these chapters as the basis for an advanced seminar.
I am greatly indebted to my wife, Elizabeth, for her continued help and
encouragement.
Austin, Texas
P. W. M. J.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Introduction
In the 27 years since the initial publication of this book, much has changed
in both application and theory of the design of experiments. The prime
catalysts have been the personal computer (PC) and its increasingly sophisticated software, and the concomitant burgeoning of experimental design
in industry. There are key debates over fixed, mixed, and random models
in the analysis of variante and over the theory of optimal designs. This
second release gives me a welcome opportunity to comment about these
topics and how they might have changed this book had it been written
today.
2.
Computers
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xiv
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xv
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xvi
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xvii
random, and then one strikes out certain interaction terms that involve
fixed effects, following rule 4. The reader should now call this rule 4r (to
correspond to the restricted rule) and add the following rule 4u (if he or
she wishes to use the unrestricted rule).
4.1. Rule 4u
In the unrestricted rule, an interaction is called fixed if and only if all its
factors are fixed. Otherwise, it is random. In the expected mean square
for any effect, strike out any interaction that is fixed and leave the others.
Do not strike out an interaction from its own EMS.
In the case of three factors with A random and B and C fixed, the only
fixed interaction is BC. We strike it out of the expectations of the mean
squares for B and C, but we do not strike it out in the line for BC itself.
Because A is random, we do not strike out the ABC interaction from any
mean square.
The restricted rule is much more liberal than the unrestricted rule in
striking out terms.
These distinctions also apply to the general balanced design in which
some factors are crossed and others are nested. We can still begin by
following the first four steps of the procedure of Bennett and Franklin that
is described in Section 5.6.
Step 5 should be revised as follows.
Write the EMS, assuming that all the factors are random and following
the rules that (i) each line of the EMS table contains all the terms that have
as subscripts all the letters in the title of the line, and (ii) the coefficient of
any component is the product of the levels of all the factors that correspond
to absent subscripts. Then strike out terms using step 5r or step 5u.
fixed effects.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xviii
5. Optimal designs
Kiefer (1959) presented to the Royal Statistical Society a paper about his
work on the theory of optimal designs. How do we choose between one
design for p factors in n points and another? How do we find the best design? This book mentions the criterion of minimizing the average variance
of the estimates of the effects, which came to be known as A-optimality or
trace-optimality.
Kiefer spoke of D-optimality, choosing the design that maximized the
determinant, D, of X'X, where X is the design matrix. How does one find
such a design?
The factors can be discrete or continuous. Users of 2n factorials have
the discrete case with x i = 1. Mitchell (1974) published his DETMAX
algorithm, enabling us to find a design that maximizes D when the experimental space has a finite number of points. His algorithm has since been
improved and is now available in some standard software packages, so that
an engineer has only to type in the values of n and p and the model (with
or without interactions), and out comes a design.
It is all very easy, but there are questions in addition to the obvious
possibility of local maxima. The criterion is very sensitive to the model.
Suppose that the model has q terms. If you drop one of the terms, a
design that was optimal for q terms in n runs is not necessarily optimal for
q 1 terms in n runs, nor does an optimal design for q factors in n points
necessarily contain a subset that is a D-optimal design for n 1 points.
Also, the solution in any case may not be unique. If one permutes the
columns of X, or if one multiplies any column by minus one, which corresponds to changing the level of that factor at every point, D is unchanged.
One can call such solutions isomorphic to one another. But there are nonisomorphic solutions in some cases. In the small problem of fitting main
effects and two-factor interactions for a 2 4 factorial in 12 points, there are
4 families of nonisomorphic solutions, all with the same maximum value of
D, and one of them is a foldover design! Furthermore, none of them is an
optimal plan for main effects only. In this case, an optimal design is given
by any 4 columns of the Plackett and Burman design for 11 factors in 12
runs.
The continuous case is beyond the scope of this book. Its mathematical
demands go further into measure theory and functional analysis than most
of our readers wish. It has become a flourishing field of research among the
more mathematically oriented statisticians. A survey of the field written by
Atkinson (1982) has more than 100 references, including books by Fedorov
(1972) and Silvey (1980). A follow-up survey by the same author in 1988
has many more.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xix
7. Finis
By contemporary standards, mine has been an unusual career. Nowadays
youngsters are expecteded to set a straight path almost as soon as they
become upper-division undergraduates and pursue it doggedly to the end.
My path has zigged and zagged with the help of some outstanding teachers
to whom I am deeply grateful. I began as a pure mathematician and first
encountered statistics in 1948 in the postgraduate diploma (now M.Sc.)
course at Oxford, where I was taught by David Finney, P.A.P. Moran, and
Michael Sampford. Upon coming to the United States, I set statistics aside
for a few years while earning a Ph.D. in probability.
Then an extraordinary opportunity occurred in industry. In 1957 I
joined Chevron Research Corporation in Richmond, California, as their
first statistician. In effect, that gave me a 4-year postdoctoral period working with Henry Scheff, whom Chevron had retained as its consultant in
the previous year. Chevron sent me to Gordon Conferences on Statistics,
which were then dominated by George Box and his pioneering work in the
application of design of experiments to chemical engineering and, in particular, to response surfaces. The conferences had an electric atmosphere
of intellectual ferment. At the same time, Henry set me to read the Box
Wilson (1951) paper and the I.C.I. book on industrial experimentation,
edited by my fellow Welshman Owen Davies. I learned a lot from that
book. The level of exposition is excellent and, unlike the spring of 1949,
when Sampford was lecturing about design to a young mathematician who
had never seen a real experiment, I now knew what an experiment was.
Real ones were going on all around me.
After 4 invaluable years at Chevron, I chose to return to the academie
world, where I have been ever since. I greatly enjoy teaching. Indeed, at
Henry's instance, for the last 3 of those years I had taught a course in the
statistics department at the University of California, Berkeley, in addition
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xx
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xxi
arranged for the first eight points to be either a resolution IV half replicate
defined by I = +ABCD, or I = ABCD, in random order. Then we
would have had a design with good salvage value when the darned pump
broke. Clearly, it would have been better to modify the randomization.
The other example led to my interest in nonorthogonal fractions. I had
persuaded an engineer to try a 2 factorial. The raw material came from a
facility in Scotland by slow boat. They sent enough for only 6 runs. I knew
what to do with 8 runs; I knew what to do with 4 runs; but 6 was betwixt
and between. I had to work out what to do. That led me to 4 factors in
12 runs, and thus to three-quarter replicates.
Both problems arose by accident. They should never have happened.
A referee of a paper about one of them objected that the problem was
contrived. It certainly was not. It was a real-life situation that probably
would not have occurred to me had I just spent my time in an ivory-tower
office thinking about mathematical theorems in the design of experiments.
Henry Scheff was right. There are all kinds of practical research problems lurking in industrial applications, just waiting to be found and solved.
I advise students to keep their eyes open and spot them. Some can be
tremendously interesting and full of theoretical challenge. Above all, being
helpful to people is rewarding in itself.
I end with the sentence that concluded my original preface. It is still
true. I am greatly indebted to my wife, Elizabeth, for her continued help
and encouragement.
Austin, Texas
P. W. M. J.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
ATKINSON,
DAVIES, O.
DICKINSON,
FEDOROV, V.
York.
HILL,
nometrics, 2, 67-82.
HOCKING,
MITCHELL, T. J.
xxiii
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
xxiv
SCHEFF, H. (1956). "A Mixed Model for the Analysis of Variance." Ann. Math.
Statist., 27, 23-36.
SCHEFF, H. (1956).
Imperial
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
Introduction
It is the view of many statisticians, amongst whom the author counts himself,
that statistics is a branch of applied mathematics, and that its health and growth
depend upon the involvement of the statistician in practical problems. This book
deals with one of the interfaces between applied mathematics and scientific
investigation: the design of experiments.
To some scientists, the idea that a statistician can contribute substantially to
the design of an experiment is, if not patently absurd, at least dubious. A common
image of statisticians is one of people who are rather clever with figures and hence
useful for reducing data to tables; the statistician might be of some help in the
analysis, but only if there are reams of data to feed into computers. One hopes that
this false image is fading with the passage of time. Meanwhile, however, this
attitude frustrates the statistician and deprives the scientist of valuable help.
It is true that the statistician is not usually an expert in the particular areas of
biology or engineering in which the experiments are being made. It is true also
that, given a computer, or for that matter enough time, pencils, and paper, one can
fit a straight line or a plane to almost any hodgepodge of data whether relevant or
not. The bigger the computer, the more variables it can handle in a multiple
regression program, and, unfortunately, the more miles of useless numbers it can
print out. It is clear, therefore, that some planning before the data is obtained is in
order, and that the planning had best be made with the method of analysis of the
experiment as well as its objectives in mind.
It follows that the role of the statistician in an experimental program should be
not merely to analyze the results of the experiment, but also to help the scientist
plan his experiment in such a way as to produce valid results as efficiently as
possible. There is little sense in waiting until the end of the experiment and then
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Introduction
[Ch. 1
visiting the statistician for the first time with a pile of data to deal with as best he
can. Every applied statistician can tell horror stories of having been asked after
the event to analyze data from lengthy and expensive experiments which were so
badly planned that no valid conclusions could be drawn from them. There are
also numerous experiments which, although valid results have been obtained,
would have yielded even more information if skilled knowledge of design had
figured in the planning, and others in which the results obtained could, with
efficient design, have been obtained with less effort and expense.
This book is written for the mathematically oriented statistician, scientist, and
engineer. The basis of all the theory of design and analysis will be the linear model
and the analysis of variance, and throughout we shall refer the reader to the book
by Henry Scheff (1959). It is the most authoritative book available on the
analysis of variance and is invaluable as a reference book. The examples that we
include are drawn from various fields; most of them are taken from the published
literature, and some of them come from experiments in which the author has
participated as a consultant.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 1.2]
An Example of an Experiment 3
This ignores the essential fact that the statistician really thinks in terms of
linear mathematical models. He is distinguished from many experimenters, who
are deeply involved in their own specialized sphere, by mathematical training
with a certain amount of emphasis on abstract thinking. This makel it easier
for him to see the essential mathematical similarity between an experiment
comparing varieties of barley and an experiment comparing operating temperatures in a catalytic cracker at an oil refinery.
The process of designing an industrial experiment is not, however, just a
matter of taking a standard design from an agricultural handbook and substituting temperature for variety and run for plot. Indeed, differences do exist
between agricultural and industrial experimentation, and, with all the incumbent
risks of generalizing, we suggest a few. One is that the agronomist usually has to
sow his experimental plots in the spring and harvest them in the fall. Plots and
plants are relatively cheap, and the emphasis has to be on. designing relatively
complete experiments; if anything is omitted it will have to wait until next year.
On the other hand, much industrial experimentation can be carried out relatively
quickly, in a matter of days rather than months, but experimental runs are
often very expensive. The emphasis should, therefore, be on small experiments
carried out in sequence, with continual feedback of information, so that in
designing each stage the experimenter can make use of the results of the previous
experiments.
The agronomist is more interested in the tests of significance in the analysis
of variance than is the industrial experimenter. One of the reasons is that the
agronomist is more often concerned with uniformity trials. Can he produce
strains of seed that are essentially equivalent? Can he produce a new variety of
seed that will do well, not just on the experimental farm at Davis, California,
but all up and down the hot Central Valley and perhaps also in the coastal
region, in the other states where the erop is grown, and even in other countries?
He wants to be able to accept the null hypothesis of uniformity. The position
of the industrial experimenter often differs from that of the agronomist in two
ways: he frequently knows before starting the experiment that his treatments
are not all the same and is interested in finding out which ones differ and by
how much. His emphasis will be on estimation rather than hypothesis testing.
He will sometimes argue that failure to reject the null hypothesis is merely the
result of taking too small an experiment. Expecting to reject the null hypothesis,
he is more interested in confidence intervals.
In the sections that follow we shall introduce the topics of the various chapters
by considering a typical experiment.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
4 Introduction
Ch. 1]
feedstock, passes through the plant unchanged; some is converted into the
petrochemical, or product. The liquid that comes out of the plant is separated
into product and unconverted feedstock, and the yield, or response, is the
percentage of feedstock converted into product.
An obvious procedure is to make one or more plant runs using each of the
catalysts and to compare the average yields on each catalyst. There are, however, some other considerations that enter the picture. How many catalysts?
How many runs? How do we compare these averages after we have obtained
them? Let us assume for the moment that the crude supply is plentiful and
consider just two catalysts, A and B, which make up the simplest situation.
We take r runs on each catalyst, N = 2r runs altogether, and we obtain average
yields yl on A and y2 on B.
The first of our mathematica) models now enters the picture. Let y ij denote
the yield on the jth run made with the ith catalyst; y ij is a random variable and
we assume y t; = m i + e ij where m i is the true value for the ith catalyst and e^ 5 is
a random component of error or noise. We further assume that on the average
the noise contribution is zero; sometimes it is positive and sometimes negative,
but it averages out over the long haul, in the sense that E(e 5 ) = 0, and so
E(y11) = m ; . Then yt will be an unbiased estimate of m i , and y l y2 will be an
unbiased estimate of m l m 2 .
The word random should not be passed over lightly. The use of randomization
is the keystone of the application of statistical theory to the design of experiments, and the validity of our deductions rests upon the principle of randomization. The very least that can be said as a recommendation for randomization is
that it is only prudent to avoid the introduction of systematic bias into an
experiment. An agronomist comparing two varieties of corn would not rationally
assign to one variety all the plots that were in the shade and to the other all the
plots that were in the sun. If he did, he would not be able to teil after the experiment whether any apparent difference in yields resulted from varietal differences
or from the fact that one variety had more sun. Furthermore, Fisher (1947) has
shown that the fact that the treatments have been randomly assigned to the runs
is itself an adequate basis for obtaining tests of significance and confidence
intervals.
The other maxim of experimental design emphasized by Fisher was replication
to provide a proper estimate of the error variance, V(e t; ). If we were to take
r = 1 and obtain y l = 80, Y2 = 79, we should not be able to make conclusions
about the relative potencies of the catalysts with much confidence. We could pick
the winner and recommend catalyst A because y l l > y21, but we should have no
idea whether the apparent difference was genuine or a result of noise (error). If
we made several runs with each catalyst, and found that the observations were
highly repeatable, i.e., that the range of the observations on A, and the range of
the observations on B were both very small, we could be happy about concluding
that m l > m 2 when we observed y l > y2 . On the other hand, if the observations
on both A and B were scattered between 60 and 90, a difference between the
means of only one would hardly be convincing.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 1.3]
and they are, as we suspected all the time, m t = i . We can also obtain an estimate of a 2 by comparing repeated observations on the same treatment. Looking
first at A, J ; (y, ; y^) 2 is an unbiased estimate of (r 1)u 2 . If there are t
treatments, E(Se ) = t(r 1)a2.
[Ch. 1
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
6 Introduction
(rt 1)a 2 = (N t) 2 ,
where N = ^, r1 . The estimate of a 2 is thus 5 2 = Se /(N t). When the hth and
ith treatments are to be compared, the statistic
Yn Yt
_
_
t s(1/rh
+ 1/ri) 1I2
+ r 2 1 az = v 2 ,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 1.4]
-1
dY,
where c is an arbitrary constant. If g(y) is directly proportional to y, the transformation z = In y is appropriate; in y denotes the natural logarithm of y;
log la y will do just as well. For binomial data the transformation z = Arcsin y
may be used, but this is often not done if the range of y is not large, especially
when p is about 0.5. When p = 0.5 we have pq = 0.25, and when p = 0.3 or
p = 0.7 the product pq only decreases to 0.21.
and
8 = (za + zs )V(2/r).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
8 Introduction
[Ch. 1
1.5 Blocking
There are two ways in which we can reduce the variance of m l m 2 . We
can take more data points, i.e., increase r and thereby increase the cost of the
experiment, or we can somehow improve the design.
Some reduction can be made by refinement in experimental technique and by
improved methods of measurement and chemical analysis, but these improvements are limited in their achievement and there still remains what might be
called the natural noire of the system. Some engineers have difficulty accepting
the fact that a system or a procedure has a built-in variability. This is true for
analytical procedures, and the American Society for Testing Materials has tried
hard to make its members realize that in standard measurements a certain amount
of variability is to be expected because of the nature of the measurement
procedure. Hence, failure to have duplicate measurements identical is not
necessarily an indication of incompetence on the part of the operator. It is
regrettable that in some laboratories duplicate measurements are useless
because the atmosphere is such that the operator feels so strong a pressure to
have his second reading conform to the first reading that the second reading
can by no stretch of the imagination be considered as an independent observation. W. J. Youden has suggested that second readings obtained in this way
should be regarded not so much as duplicate readings as duplicity; they certainly
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 1.5]
Blocking
give the scientist a false sense of confidence in his results. Genuine duplicates can
be obtained by sending the analytic laboratory coded samples, e.g., pouring a
gallon of product into eight pint bottles and calling for a single determination
on each of the eight "different" samples. It is a nuisance to have to do this, but
it is often worth the trouble, and the results can be quite revealing.
One way of improving the precision of estimates of differences, such as
m l m 2i is by blocking. If there are t catalysts, perhaps we can take a barrel of
crude oil, divide it into t parts, and use one part with each catalyst. The agricultural equivalent is to divide a field into blocks and then to subdivide each block
into t plots. This topic is discussed at the end of Chapter 3. When we have a
completely randomized design in which the runs are made in completely
random order, or in which the plots with any given treatment are scattered all
over the field, then comparisons between treatments contain additional variability from the fact that some runs are made from one barrel and some from
another, or that some are made on good land and some on stony land. The idea
behind the blocking is that by balancing the treatments over the blocks we make
the differences between the blocks cancel out when we compare the treatments.
The individual estimates of m l and m 2 are no better than they were before, in the
sense that V(y) has not been reduced, but V(y l y 2 ) has hopefully suffered a
considerable reduction.
This is the randomized (complete) block experiment, and the reader should
note that the word randomized appears again. We assign the treatments at
random to the runs within each block; we should perhaps be suspicious if we
always used the first sample drawn from each barrel for catalyst A and the last
sample for catalyst B that there might be some systematic bias introduced. We
modify our earlier model and, letting yl; denote the observation on the ith
treatment in the jth block, we write y tf = m ; + b1 + e{; where b; is the effect of
the jth block. We shall actually write the model a little differently later when we
come to look at it a little more closely.
This procedure works well so long as each barrel of crude oil is big enough
to handle t runs, and the randomized complete block design is said to be the
most commonly used experimental design. If, however, the blocks are not big
enough to accommodate all the treatments, we have to resort to incomplete
blocks, with k (<t) treatments being contained in each block. The topic of
incomplete block designs is introduced in Chapter 11. If we cannot arrange to
have every pair of treatments appear together in every block, perhaps we can
arrange the design so that every pair appears in A blocks where t is a constant.
Such a design is called a balanced incomplete block design. These designs were
introduced by Yates in 1936, but long before then such arrangements of symbols
had been of interest to pure mathematicians. Number theorists have for years
investigated the combinatorial properties of these designs without any care for
possible statistical applications. Chapter 13 is devoted to the problems of the
construction of balanced incomplete block designs. It is a chapter for mathematicians, and the experimenter who simply wants a particular design for his
experiment might be content to look it up in the Fisher and Yates tables.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
10 Introduction
[Ch. 1
The restriction that each pair of treatments shall appear in exactly A blocks is
demanding, and designs do not exist for all values of t, k, and A. In 1939 Bose
and Nair introduced partially balanced incomplete block designs. These designs
are the topics of Chapters 12 and 14, the latter chapter being devoted to the
construction of the designs for different partially balanced schemes. In partially
balanced designs each treatment appears with n l of the other treatments ,1 1 times,
with n 2 of them d 2 times, and so on. There are also some further restrictions, but
they can wait until Chapter 12.
Just as one would not normally use an incomplete block design when a
suitable complete block design is available, so balanced incomplete block
designs are preferable to partially balanced designs because of their higher
efficiency. The measure of efficiency is the average of the variances of the
estimates m,, m i for all pairs of treatments; the measure is made scale free by
dividing it by the average that would be obtained for a complete block design
with the same number of observations, if such a design could have been used.
Kempthorne (1956a) conjectured, and J. Roy (1958) proved that for any given
set of numbers N, t, k (k < t) the most efficient incomplete block design is the
balanced design; that is, if one exists.
Here m is a grand mean effect, a, is the main effect of the ith level of A, and bj is
the main effect of the jth level of *B. We talk of the several crude oils as being
levels of the factor "crude oil." The terminology sounds artificial in this context,
but its justification becomes more apparent when we think of a quantitative
factor such as temperature at levels of 100, 200, and 300 degrees.
The model that we have just written is an additive model. It may be
inadequate. It could happen that the first catalyst is clearly better than the
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 1.6]
Factorial Experiments
11
others on all crude oils except the Sumatran, which might perhaps have a higher
sulfur content. This failure of the additive model, inasmuch as the expectation
of the difference between observations on different crude oils does not remain
constant from catalyst to catalyst, is an example of interaction between the
factors. Interaction is an added complication, and at this stage the experimenter
has to face up to a problem that he should have thought about earlier. From
what populations did the levels of the factors that were used come? If the
catalysts are some specific types having perhaps an alumina base, a silica base,
and so on, we have a fixed factor, meaning that the levels are fixed effects, and
the parameters a i are unknown constants. The objective would then be to
investigate comparisons between the parameters a i .
On the other hand, suppose that the barrels of crude oil were all drawn from
day-to-day production in the same California oil field. The effect b. would be a
random variable representing the day-to-day variation in the quality of the oil.
Then B would be a random factor, and the objective would usually be to obtain
an estimate of the component of variance V(b) = ob.
If both factors are fixed, we have a fixed effects model. If both are random, we
have a random effects model. If there is one of each, we have a mixed model.
The analysis, particularly in regard to the choice of denominators for the F
statistics, depends upon which of these three types of model is relevant. This is
discussed for the case of two factors in Chapter 4.
In Chapter 5 we turn to factorial experiments with several factors. Some of
the further development is a routine extension of the results of Chapter 4 to a
few more dimensions. There are, however, other complications and variations
that will be considered at that time. One of them merits mention now.
Let us return for a moment to the crude oils and the catalysts. Suppose that
there is indeed within each oilfield barrel-to-barrel variation in the quality of the
crude oil, and that we take three barrels from each of four fields and make one
run with each catalyst from each of the twelve barrels. This is an example of
what is called a split plot experiment. The catalysts see every barrel, and so
barrel differences cancel out in comparing catalysts. However, in comparing
crude oils each crude oil average contains the variability only of its own barrels,
and this does not cancel out.
The term split plot comes from the agricultural background at Rothamsted.
A modern example of split plots occurs with the use of crop-dusting aircraft.
One possibility is to take several fields; these will be the plots, or the whole plots.
We now divide the field into strips and plant each strip with a single variety of
barley; if there are enough strips we may have several strips to each variety.
These strips are the subplots. Suppose now that we also want to test some
fertilizers. We can then fertilize each complete field with the same fertilizer by
spraying it from an aircraft. Comparisons between fertilizers will be made
between whole fields. Comparisons between varieties of barley will be made
between strips in the same field. Conversely, one could apply the different
fertilizers by hand to the different strips in the fields, and then sow the seeds a
field at a time from an aircraft. A more complicated approach would be to sow
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
12 Introduction
[Ch. 1
strips running north-south from the air using different varieties for each strip in
each field, and then to spread different fertilizers over the field by having the
aircraft fertilize strips running in the east-west direction. There are numerous
possibilities.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 1.8]
one block, and the remainder in one or more other blocks. One of the possible
contrasts between the data points will coincide with the differente between the
block totals. That degree of freedom is said to be confounded with blocks.
Clearly we should not like, for example, to include all the points at high temperature in one block and all the points at low temperature in the other block,
because then the temperature effect, if any, would be hopelessly confused or
confounded with the block effects. We should like to divide the design into
blocks in such a way that the division does as little damage as possible to the
design.
In Chapters 8 and 9 we turn to fractionation. We have already mentioned the
Latin square design as a 1/3 fraction of a factorial with three factors, each at
three levels. There are several reasons for the extensive use of fractional factorials. The relatively high cost of industrial experimentation makel it essential
that the designs used be as economical and as efficient as possible. Runs on a
refinery unit may cost several thousand dollars a time, and, even though the
eventual payoff may be many times more than that, management decision
makers are usually loath to spend more money on experimentation than they
feel is absolutely necessary.
The fact that it is possible to carry out experiments in relatively quick
succession means that it is feasible to consider in the initial stages of an experimental program a large number of factors in the hope of finding a few important
ones for further investigation. Such an initial experiment is called a screening
experiment, and it is customary to use as small a fraction as possible with hardly
any more degrees of freedom than there are factors. We shall consider such
designs for n 1 factors in n runs.
An example in which, on the other hand, the scientist hopes to find no
important factors is found in the food industry. Suppose that a company has
developed a new cake mix. When made in their laboratory ovens it is excellent.
Before marketing it, however, the company needs to be sure that it is robust
against the vagaries of the outside world, the uncertainties of the equipment in
many home kitchens, and the mistakes of some housewives. Will the new mix
produce an acceptable cake if the oven is ten degrees too hot or ten degrees too
cold, if it is left in too long or taken out a few minutes too Boon, if when the
cook adds the prescribed two eggs, she uses extra large eggs or the smaller
economy size? Here it is appropriate to run a screening experiment to check a
whole list of possible mistakes as factors with the hope than none, or at most only
a few, will turn out to be damaging to the cake.
Interest in fractional factorials has grown steadily during the last decade.
With factors at two levels, we shall present designs that allow us to estimate all
the main effects and two factor interactions if the higher order interactions are
ignored; smaller designs for estimating main effects but not the two factor
interactions; and even smaller designs for estimating all the main effects if all
the interactions are ignored. With factors at three or more levels, the number of
degrees of freedom taken up by the two factor interactions increases fast with n,
and most of the designs that are used are for the estimation of main effects only.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
14 Introduction
[Ch. 1
Y=X t l + e,
t2
where e is the vector of errors and X is a matrix with three columns and N = 2n
rows. The first column of X is 1 N , a column of N unit elements which corresponds
Matrix Representation 15
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 1.10]
=
t
(Ys1 .Yti) 2
1y, ; =Nm+ni,+n12 ,
n92 =
n9l=1Ylf=nm+ni,
X'Y = X'X(m, tt 1 , 1 2 ).
y2f = nm + n? 2i or
We cannot invert X'X because it is singular. Had we stayed with the earlier
formulation of the model, we would have avoided this crisis. However, we are
really concerned with (m + t1 ) (m + 2 ) = Zl 12 . Subtracting the third
normal equation from the second we have i l 12 = Yl 92, which comes as no
surprise; also, = y i .
We now consider four quadratic forms. One of them is the raw sum of squares
li Ir Y i = Y'Y = Y'IY. The second is N92 , where y is the mean of all N
observations. This form may be written as Y'J N Y/N, where J N denotes a square
matrix of order N with every element unity.
The identity
y4 r = NY 2 +
r
(Yj 9)2
{
may be written
Y'Y = Y'A 1 Y + Y'A 2 Y + Y'A 3 Y,
where
Al = N - i JN,
A 2 = (2n) - [
J" ij
Jn
I n - 'J,^
A3_
0
[
0
I, n Jj
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
16 Introduction
[Ch. 1
(the ranks of the forms are equal to the numbers of degrees of freedom). Under
2) distribution, and the test is
the null hypothesis this statistic has the
the same as the usual t test.
Indeed, we have
F(1, N
n(91 Y2)
2
se _ n(Y1 Y2)2 t .
N-2
2s2
2
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
Linear Models
and Quadratic
Forms
2.1 Introduction
In this chapter we derive some of the mathematica) results that will be used in
the subsequent chapters. The treatment makes considerable use of matrices and
quadratic forms; a short discussion of these topics appears in the appendix.
If we arrange the data in an experiment in a vector Y, the analysis of variance
procedure involves separating the sum of squares of the observations y 2 or
Y'Y into a set of quadratic forms
Y'Y=Y'A 1 Y+Y'A 2 Y+Y'A 3 Y+
If the observations Y are normally distributed, tests of hypotheses are made by
examining some of the ratios of these forms. The distribution of quadratic forms
is the topic of one of the later sections. This section is somewhat more demanding
mathematically than the rest of the chapter. Some readers may wish to omit it
provided they are prepared to accept our assurances that except where we say
otherwise:
(i) Y'A Y does, with the proper divisors, have a X 2 distribution with the
number of degrees of freedom equal to the rank of A,
(ii) The forms are independent, and, hence, (iii) The corresponding ratios
have F distributions.
{
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 2
yt =
Nixil
N2xi2
++
NP tD +
ei,
with xij denoting the value of the jth coordinate at the ith data point. We shall
customarily use matrix notation and write
Y=Xf3+e,
where Y is a vector of N observations, X is a matrix of known constants, (3 is a
vector of p parameters, and e is the vector of random errors.
The matrix X = (x j ) is sometimes called the design matrix; it has N rows and
p columns. In the experimental design situations that will be considered, x, i will
take only the values zero or one. That restriction is not, however, necessary for
the results of this preliminary chapter. The elements of the parameter vector (3
will usually be unknown constants; there will be some occasions in later chapters
when we shall consider the special case in which the parameters f3; are random
variables. Our main purpose will be to obtain estimates of these parameters f3,
or some functions of the parameters, and to test some hypotheses about them.
The hypotheses will usually be that some subset of the parameters P 1 , ... , ,8 are
all zero.
The model is raid to be linear because it expresses y as a linear combination
of the parameters P; . There is no restriction that the model has to be a linear
function of the x j or that the Jatter be independent. We can put the polynomial
Po + flix + j2 x 2 + 93x 3 into this form by setting x l = x, x2 = x 2 , x 3 = x 3 .
Some models that are not linear can be made so by transformations. For
example, y = AeBx becomes z = Po + , 1 x if we take z = in y; then Po = ln A
and S l = B. On the other hand, the two models
Y = N1 + 1 f(N2 + N3x)
and
y = AeBX + CeD"
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.4]
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 2
p N
XisxijP, = o.
X^jYi
s=li=1
{=1
These are called the normal equations. In matrix form they may be written
X'Y = X'X.
The matrix X'X is a symmetric matrix with p rows and p columns. Its rank
is the same as the rank of X, which is the number of linearly independent
columns of X.
Furthermore,
coV ( f") = (X'X)-1X'Ia2X(X'X)-1 = (X'X) 1 a 2 .
-
whence,
Se = Y'(I X(X'X) - 'X')Y.
We denote the quadratic form Y'X(X'X) 'X'Y by SR and call it the sum of
squares for regression. We have a subdivision of the total sum of squares into
two components, Y'Y = S R + Se.
-
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.6]
We shall see later that the expectations of these two component quadratic
forms are E(SR ) = (3'X'Xp + pa 2 , E(Se ) = ( N p)a 2 . Since X'X is positive
definite, p'X'X(3 is nonnegative and is zero only when (3 = 0. Under normality,
SR /a 2 has a noncentral x 2 distribution with p d.f., and SQ /a 2 has a centra! X2
distribution with (N p) d.f.; furthermore, the two forms are distributed
independently. Thus, an appropriate test for the hypothesis H0 : (3 = 0, with
alternative HA : (3 s4 0, makes use of the test statistic F = p~'SR /(N
Under the null hypothesis, F has Snedecor's F distribution with p and (N p)
d.f. The critical region is the upper tail of the F distribution. This is a consequence of the following results about the distribution of quadratic forms in
normal variables. Let Y N(, I). Then Y'AY X 2 (m) if, and only if, A is an
idempotent matrix of rank m; Y'AY and Y'BY are independent if, and only if,
AB = 0.
We shall not attempt a comprehensive discussion of fitting planes and hyperplanes to data. The reader who wishes to look further at the practical aspects is
referred to the book by Draper and Smith (1966). It has become the custom to
refer to the variables x 1 , ..., Xk as independent variables and the observed
response y as the dependent variable. The use of the word independent should not
be taken seriously. It derives from the habit in beginning algebra courses of
labeling y as the dependent variable and x as the independent variable in the
formula y = x + 3, because one can choose any value of x, substitute in
the formula, and obtain the value of y. Nothing, however, is implied about the
independence of the x variables. Indeed, as we mentioned before, we can fit a
polynomial in x by letting x = x,.
In some situations we have no control over the elements of the design matrix
X. When we can choose the points at which observations are to be taken, we
note that cov () = (X'X) -1 a 2 , and choose the experimental points with this in
mind. One possibility could be to choose X in such a way as to minimize the
average variance of the Pi . This is equivalent to minimizing the trace of (X'X) -1 .
This procedure of fitting hyperplanes is commonly used to obtain equations
for predicting future values of the response given x 1 , ... , X. If f3 = 0, we might
conclude that x ; is of little use as a predictor variable, although one should be
careful about jumping to that conclusion when x i is highly correlated with other
independent variables. One might ask the following question: are the predictor
variables x 1i x 2 , ... , X k collectively useless as predictors, or, alternatively, does
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch.2
adding the set of x variables give a significant improvement over the simpler
prediction equation E(y) = P o ? More formally, we wish to test the hypothesis
Ho : p* = 0 where (3* = (P1, P2. Pi), against the alternative HA : F3* # 0.
We have two nested models:
L: E(y) = po i
Qi : E(y)
= Po +
fl,x1.
Under normality, the three quadratic forms Y'A 1 Y, Y'A Z Y, Se have, upon
division by o 2 , independent X 2 distributions with 1, k, and N k 1 d.f.
respectively. The test statistic for Ho is
= Y'A 2Y/k = Se /(N k 1),
which has, under the null hypothesis, the F(k, N k 1) distribution. Some
writers prefer to call Y'A 2Y the sum of squares for regression. We shall not do
this, but shall continue instead to let SR = Y'Y S. The generaI question of
testing subhypotheses will be considered later.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.8]
p1
P2=(3+t)
(5+t)= 2,
P0
X' = X'XPX'.
(2.1)
X'XP = X'XPX'XP,
so that X'XP is idempotent. It may similarly be shown that XPX' and PX'X
are also idempotent. Furthermore, multiplying on the right by X gives
X'X(PX'X I) = 0, so that a general solution to the equations X'X (i = 0 is
(PX'X I)Z, where Z is an arbitrary vector. A general solution to the normal
equations is thus
= PX'Y + (PX'X I)Z.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 2
If P = (X'X) -1 , the extra term vanishes; if k < p, it would appear that we might
find ourselves in the awkward position of having numerous solutions. If we seek
to estimate a linear function = a'(3 by substituting solution vectors (3 for [i,
we obtain a set of estimates
^ = X'PX'Y + X'(PX'X I)Z. (2.2)
We now define an estimable function [Bose (1944)]. A linear combination
= X'[3 of the parameters is said to be estimable if, and only if, there exists a
linear combination c'Y of the observations such that E(c'Y) = a'(3, i.e., such
that c'X(3 = ?'f3 for all vectors P. The condition is that a vector c exists such
that X'c = ).. A linear function 0 is estimable if, and only if, ais a linear combination of the rows of X. It follows that the set of estimable functions forms a
vector space. The dimension of the vector space, i.e., the number of linearly
independent estimable functions, is equal to the rank of X.
An equivalent necessary and sufficient condition for a linear combination of
the parameters to be estimable is that there exists a solution vector to the
system of equations X'Xr = a. If such a vector r exists, then we let Xr = c.
Conversely, if there is a vector c such that X'c = a, c is a solution vector to that
set of equations, and hence r(X') = r(X', l). It follows that r(X'X) and
r(X'X, X) are also equal, and so the set of equations X'Xr = a has a solution
vector r.
Multiplying Equation 2.1 on the left by r' and on the right by X gives
r'X'X = r'X'XPX'X or a' = X'PX'X. Hence the term X'(PX'X I)Z in
Equation 2.2 vanishes, and that equation becomes = X'PX'Y.
Let P* be any other solution matrix. From Equation 2.1 we have X'XPX' _
X'XP*X'. Multiplying on the left by r' gives a'PX' = X'P*X', whence _
a'PX'Y = a'P*X'Y.
Thus, we have shown that the estimates of estimable functions are unique.
They are the same, no matter which solution vector (i to the normai equations we
choose. Henceforth, we can denote ?'PX'Y by and call it the least squares
estimate of a'(3.
The estimate is unbiased; we have
E(^) = E(X'PX'Y) = X'PX'Xp = X'(3.
The variance of is given by
V() = V(a'PX'Y) = X'PX'XP'aa 2 = a'Paa 2 .
This means that we can, in calculating the variances of least squares estimates of
estimable functions, act as if Pa 2 is the variance-covariance matrix of 0. In
particular, for any solution matrix P we have
V(N1 Ni) = (Ptt + pij pui Pi1 )a2
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.8]
X'=
0 0 0;
0 0 0 1
6 3 3
X'Y = 3 3 0 .
3 0 3
The usual method of solving the equations is to impose the side condition
t l + t 2 = 0 upon the parameters. This makes the first equation 6m = G,
whence 61 1 = 2T1 G and 612 = 2T2 G. The corresponding solution
matrix P l is unsymmetrical.
1 0 0
6P 1 = --1 2 0
1 0 2
1
12P 2 = 1
1 3
1 3
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 2
Two other solution matrices having t 2 = 0 and t l = (T1 T2 )/3 are given by
00
3P 3 = 0 1 1 ,
0 0
3P 4 = 0
1 1
1 1
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.9]
A* = [XIX H'1
H 0
Then r(A*) = p + m, and A* -1 exists. Let
A* _1 = B11 B12
B21 B22]
(2.3)
X'XB 12 + H'B 22 = 0,
(2.4)
HB 11 = 0,
(2.5)
HB 12 = I.
(2.6)
Multiplying Equations 2.3 and 2.4 on the left by D' and recalling that D'X' = 0
and that D'H' is not singular, we have D'H'B 21 = D', whence B12 = B'21 =
D(HD) -1 and D'H'B 22 = 0, whence B 22 = 0.
Multiplying Equation 2.3 on the left by B 11 gives B 11 X'XB 11 = B, and so
X'XB 11 is idempotent.
X'XB 11 = I H'B21 = I H'(D'H')
-1
D',
In the second method [Scheff (1959) and Plackett (1960)], the solution
matrix is P* = (X'X + H'H) -1 , with 0* = P*X'Y as the corresponding
solution vector (see particularly Scheff, p. 17). Numerically, P*X'Y = B 11 X'Y,
but it does not follow that (X'X + H'H) -1 = Bl1.
cov (*) = (X'X + H'H) -1 X'X(X'X + H'H) - lo2 = cov (^) = B ll v2 .
But (X'X + H'H)(I D(HD) -1 H) = X'X, and so
(X'X + H'H) -1 X'X(X'X + H'H) -1 = (I D(HD) -1 H)(X'X + H'H) -1 = B11.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 2
so that
(X'X + H'H) -' = B 11 + D(D'H'HD) - 'D'.
where
P'A'P = (0 0)
and
P'A,P = (B; Cl )
i
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.111
where A is the diagonal matrix whose diagonal elements are the n l nonzero
latent roots of A l , and B ; is a square matrix of order n l . Throughout this proof,
j takes the values 2 < j 5 k.
Suppose all the A. are idempotent. To establish condition (ii), it is enough to
show that A,A ; = 0 for all j. We have A = I and 1, tr (Bi ) = 0; but P'AfP
is idempotent, and so the diagonal elements of B ; cannot be negative. Hence
B1 = 0 and C, = 0 for each j. It follows that A 1 A, = PP'A 1 PP'A1P = 0.
Since P'A;P is idempotent, E; is idempotent. Then n = tr (In ) = n l +
1 tr (E; ) = n l + 1 n f , and condition (iii) is established.
We now show that conditions (ii) and (iii) each imply condition (i). Suppose
A,A 1 = 0 for all pairs i, j where i j. Then for each i,
A;= AtiI= A{(A1+ ..+Ai+...+A,j=A,.
.
Lemma. Let E(Y) = p and cov (Y) = Io 2 . Then E(Y'AY) = 'A + a 2 tr (A).
PROOF.
Y'AY =
a, t yi + 2
t
E(y) = i
+ a 2 ,
at,yty>>
<1
E(ytyf) = tlif
Hence,
= &' AN.
+ a2 tr (A).
t<1
[Ch. 2
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Suppose X
U)' V
(X
U)},
and the corresponding multiple integral over the range 00 <X < +00 is
unity. The moment-generating function of Y'AY is
E[e<Y"A Y ] = (2^.) - Nj 2
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.11]
PxooF. We give a proof for the case = 0 when the distribution is central
X2.
Two extensions of this theorem are of interest: we state them without proof as
corollaries.
Corollary 1. 1f Y N(, Ia 2 ), the quadratic form Y'AY/a 2 has a noncentral X 2
distribution with m d.f. and noncentrality parameter A = 'A/2a 2 if, and only if,
A is idempotent of rank m.
Corollary 2. 1f Y N(, V), the form Y'AY has a noncentral x 2 distribution
with m d.f. and noncentrality parameter A = 'A/2 if, and only if, AV is an
idempotent matrix of rank m.
The following theorem is concerned with the independence of quadratic forms
in normal variables. There are at least five proofs in the literature, mostly for the
case = 0 [Craig (1943), Hotelling (1944b), Ogawa (1949), Aitken (1950), and
Lancaster (1954)]. The validity of the first two proofs has been questioned.
Hotelling questioned Craig's proof, and his proof in turn was questioned by
Ogawa. The proof that we shall give is a modification by Lancaster of Aitken's
proof.
Theorem 3. Let Y N(1r., I). Two quadratic forms Y'AY, Y'BY are independent
ifandonlyifAB = 0.
PROOF. [Lancaster (1954)]. This proof is for the case = 0. We have shown
that the moment-generating functions of Y'AY and Y'BY are 11 2AsI -112 and
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 2
(2.3)
for all values of s and t in an interval around the origin if, and only if, AB = 0.
The sufficiency part is trivial since, if AB = 0, we have
^I-2AsJ I-2BtI = ^I 2As 2Bt+4ABst = ^I-2As-2BtI.
Conversely, suppose Equation 2.3 is true. Let P be an orthogonal matrix such
that
P'AP =
`0
(A 0
0)
P'BP =
C^^ C^2
C21
C22
where A is diagonal and A and C 11 are square matrices of order r(A). It follows
from Equation 2.3 that for any ,1 0 we may replace s by s/A and t by t/)) to
obtain
IJ-2AsH Ju-2BtI = a"IM-2As-2BtI
or
^1I 2P'APs
2P'BPtI
2P'APs 2P'BPtI.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.11 ]
For sufficiently small s we have
+ ... + ( 2As)"
+ ... ),
+ 2Bt +(2Bt) 2
_X
(i) n i = n;
(ii) Each A t is idempotent;
(iii) A,A1 = 0 for all pairs i, j, where i 0 j;
(iv) Y'A 1Y x 2 (ni) for each i;
(v) Y'A {Y, Y'A 5Y are independent for all i, j where i # j.
Each of the forms Y'A,Y may be written as Y'Bi'B1Y where Bt is a matrix of n,
rows and n columns such that B,B! = I74 i.e., such that the columns of Bi form
an orthonormal set of ni vectors, It follows from the fact that A tA; = 0 that
BBI' = 0 also, for we have
A1A5 = BiB,BJBJ = 0,
and, multiplying on the left by B i and on the right by Bi,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch.2
Since :G* is unbiased, E(*) = 0 and b'Xp = 0. for all parameters [i so that we
have b'X = 0.
Then
V(O*) = (a'PX' + b')(a'PX' + b')'a 2
= (a'PX'XPa + b'XP'a + )^'PX'b + b'b)a 2
= V(^) + b'bo2 = V(^) + bi a 2 .
Thus V(/*) >_ V(+) with equality only if b = 0. We have already shown that
is unique. Hence, is the unique unbiased estimate of 0 with the minimum
variance.
u
We now show that the least squares procedure produces an unbiased estimate
of a2 . The expected values of the observations are estimable functions with
estimates Y = X^i, and we have minimized the sum of squares for error Se =
(Y Y). The subdivision of Y'Y into rums of squares, Y'Y = SR + Se ,
was sketched briefly at the beginring of this chapter for the case in which
r(X'X) = p. In the general case, recalling that X' = X'XPX', we have
yl
' = ^i'X'XO = Y'XP'X'XPX'Y = Y'XPX'Y = Y'Y = Y'Y,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.12]
and
Se =Y'YY"'i'Y+' 't = Y'(I XPX')Y,
SR = Y'XPX'Y = ^3'X'Y.
Since E(Y) = X(d and cov (Y) = Ia',
E(Y'Y) = (3'X'1X13 + a 2 tr (I) = f3'X'X(3 + Na 2 ,
and
E(SR) = E(Y'XPX'Y) = E3'X'XPX'XR + a 2 tr (XPX').
XPX' is idempotent, and so tr (XPX') = r (XPX'). Now r (XPX') < r (X) = k;
but X' = X'XPX', and so r(X) = r(X') < r(XPX'). Hence, r(XPX') _
r(X) = k, and we have
E(SR) = f'X'X13 + ka 2 ,
and, by subtraction,
E(Se) = (N k)a 2 .
Thus, we see that the sum of squares for error provides an unbiased estimate
S 2 = Se /(N k) of the error variance a 2 .
The matrices XPX' and (I XPX') of the quadratic forms SR , SQ are both
idempotent. Under normality, the conditions of Cochran's theorem are satisfied
if we replace Y by o - 1 Y, and so SR /a2 and Se /o 2 have independent X 2 distributions with k and (N k) d.f. respectively.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 2
+ t*('P%ls2)-1I2
We write S R (P 2 ), SR (P) for the sums of squares for regression under the
reduced and complete models, respectively, and SR(P1IP2) for the difference
SR (P) SR (P 2 ). Let M be a solution matrix for the reduced normal equations
X2Y = X' X 2 (3 2 i X 2 MX2 is idempotent and SR (P 2 ) = Y'X 2 MX2Y.
We now have a subdivision of Y'Y into three quadratic forms:
Y Y = SR\N2) + SR(P1I P2) + Se,
'
Missing Observations 37
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 2.14]
The first term is minimized if we take 0 to be any solution vector to the normal
equations for the N actual data points, and the second term is zero if we take
y=x0.
From an abstract point of view we appear to have gained nothing except to
say that the best estimate y is obtained by solving the normal equations for the
actual data and substituting 0 for (3 to obtain y = x^i. In practice, however, the
design matrix (X', x')' is usually chosen in such a way that the augmented
normal equations can be solved very easily, whereas the equations X'X[3 = X'Y
may be more awkward to handle computationally. Since y x^3 = 0, an
equivalent procedure, which we shall use later, is to choose for y the value that
will fit the model with zero residual when the least squares procedure is carried
out on the set of (N + 1) points consisting of the N data points and the missing
plot (x, y).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 2
Exercises
1. Let y l and y a be independent random variables each N(, 1). Then Z =
(Y Y2)/V2 N(0, 1) and Z 2 _ X 2 (1). Writing Z 2 = Y'AY where Y' =
(Yi, Ya) show that the expression for the moment-generating function of Z 2 :
M(t) = II 2Atj -1 j 2 exp '{I (I 2At) -1 }/2 reduces to (1 2t) -112 .
2. Let Y N(, I). We proved the theorem that Y'AY X 2 (n,), if, and only if, A is
an idempotent matrix of rank n, for the case = 0. Prove it for the case ^ 0.
3. Prove that if Y N(0, V) then Y'AY X 2 (n) if, and only if, AV is an idempotent
matrix of rank n.
4. If Y N(0, V) show that the two forms Y'AY, Y'BY are independent if, and only
if, AVB = 0.
5. If A and B are nonnegative definite matrices and if Y N(0, I), show that the
forms Y'AY, Y'BY are independent, if and only if, tr (AB) = 0.
6. Let Y N(0, D) where Dis diagonal, and let
A = D - ' (D - 'JD -1 /1'D -1 1).
Show that Y'AY X 2 (n 1).
7. Let Y be a vector of n independent normal random variables with E(y) = , and
V(y ) = wr 1 , and let y = 1 w,y,/> w,. Show that
1 ws(Y1 9) 2
X 2 (n 1).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
Experiments
with a
Single Factor
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.1 ]
yij=
i= 1, 2,...,t;j= 1,2,...,r,
s +e15,
where y{ f denotes the jth observation on the ith gasoline, or the yield on the jth
of the plots that were sown with the ith variety of wheat, , denotes the " true "
value of the octane number or the yield of the ith gasoline or variety; i.e.,
E(y 15 ), and e15 is the random error of the (ij)th observation or plot. We assume
that the , are unknown constants, and that the e11 are uncorrelated random
variables, each distributed with the same mean, zero, and the same variance Q 2 .
We use the general term treatments for the gasolines or the varieties and speak of
an experiment with t treatments.
In addition we may make the normality assumption, namely that the elf are
normally distributed, i.e., the vector e of the e15 has a multivariate normal
distribution with mean vector 0 and covariance matrix Ia 2 .
The least squares estimate of p-, which is the maximum likelihood estimate
under the normality assumption, is the average of the observations on the ith
treatment. Writing
G
Ti = > y1j,
y11,
y,. = Yt = Ti/r,
we have
(3.1)
11 = yt.,
Se = t(r 1 )s 2
( Yti
y1.) 2 =
2u
T2 /r.
(3.2)
If the number of observations is not the same for each treatment, we denote the
number of observations on the ith treatment by r, and let y,. = Tlr,. .Then
Equation 3.2 becomes Se = I i Ii yi'i l { T,2 /r1 .
We shall use N to denote the total number of observations, G for the grand
total 1, I i ytj of the observations, and y.. or y for the grand mean G/N. The case
where ri = r for all i will be called the equireplicate case. (Some people like to say
that the ith treatment is replicated r, times; we shall do so when we consider
incomplete block designs in a later chapter).
Under the normality assumption the hypothesis , = ,. can be tested by
Student's t test. In the equireplicate case the test statistic
t = (yi Y'i) (r /25 2 )
has, under the hypothesis, Student's t distribution with t(r 1) d.f.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
ri + eu ,
where yi and e15 are the same as before, is a general mean, and T{ is an unknown constant parameter associated with the ith treatment. We shall call -Ti the
main effect of the ith treatment. Neither nor T{ is estimable; if we were to add
any arbitrary constant c to and subtract c from each T,, the expected value of
each observation y ij would remain unchanged.
The model may also be written E(y 5) = + l h XhTh where x, = 1 if the
observation is made on the ith treatment and zero otherwise. The design matrix
X has N rows and t + 1 columns; assuming that there is at least one observation
on each treatment, the rank of X is t. The first column, corresponding to , is 1 N ,
a vector with every element unity. The remaining columns, corresponding to
treatments, consist of zeros and ones, and in any row exactly one of these
columns has unity as its element. Thus, the first column is equal to the sum of the
last t columns, and the last t columns are linearly independent.
If, therefore, we wish to use this model, we must impose a side condition on
the parameters. Three possibilities come to mind.
(i) = 0. This sends us back to the original model with Ti instead of ,.
T l = 0. This is useful in some computer programs. It amounts to designating treatment 1 as a base treatment. If treatment 1 is a control or
standard treatment, this has some merit.
(iii) 1 t ri ri = 0. This is the most commonly used side condition. It reduces to
1, -r, = 0 in the equireplicate case. An attractive consequence is that
with this side condition = 1, I f yij /N = y. We shall use this condition.
(ii)
Although and Tt are not estimable, ( + Ti) is estimable. Its least squares
estimate is y i ., which is the same as i was before. Similarly, the hypothesis
= . is the same as the hypothesis T, = -r,., and can also be tested by y 1 . yi ...
One might ask what, if anything, is gained by introducing the additional
complication of singular design matrices. It will actually turn out that when we
consider several factors, or experiments with blocking, we shall be faced with
singular design matrices anyway. The advantage in this simple experiment lies in
the fact that the new model gives a sum of squares for treatments.
The simplest model that could have been chosen for the data would have been
ysi=+eu,
which is equivalent to assuming that all the i are equal, or that with the side
condition 1 Ti = 0 all the -r, are zero. Under this model = G/N, and the error
sum of squares is
S=
G=yii
t
G 2 /N.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.1]
When the treatment parameters r, are added to the model the estimate of is
stil! . = y; the estimate of Tt is Tt = y,. y, and the new sum of squares for
regression is
SR = G + Tf zt = G 2 /N +
i
TT(yc.
9) _ T2 /rr .
t
The reduction in the sum of squares for error or the increase in the sum of
squares for regression because of the addition of the treatment parameters to the
model is thus 1 T,a/r G 2 IN. This is called the sum of squares for treatments
and is denoted by S. The sum of squares for error, S e , is the same as it was with
the first model.
We now have the subdivision of the sum of the squares of the observations
{
Y'Y = G 2 /N
(y{r y,) 2
or
Y'Y =C+St + Se .
The term G 2 /N is called the correction for the mean and is often written as
C. Y'Y is called the raw sum of squares; the corrected sum Y'Y C is called
the total sum of squares, and we shall occasionally denote it by ST .
The quadratic forms C, St , and Se have ranks 1, t 1 and N t respectively.
Under normality they have, upon division by a2 , independent chi-square
distributions. The expected value of C is a2 + N -1 (N + r,-r,) 2 . 1f we write
rr r1 = NT, this becomes a2 + N( + T) 2 , and if we take the side condition
r,-r, = 0, E(C) reduces to u2 + N2 . To compute E(St) we note that
Then
E(S) = (tal + Ng + 2
2
rt T, + rir2) E(C)
_ (t 1)a 2 +
r,(_, T) a .
Source
SS
EMS
d.f.
Total
Y'Y C
N 1
Treatments
Error
7 /r, C
Y'Y 7 /r,
t 1
a2 + ( t
N t
aa
1)' r ( r, T)z
{
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
There has been a tendency in the last few years to replace the words analysis of
variance by the single word, Anova. In the column headings SS stands for sum
of squares and EMS for the expected value of the mean square, the Jatter being
the sum of squares divided by the number of degrees of freedom. The mean
squares for error and treatments may be denoted by Me and Mt respectively,
although we shall usually use s 2 rather than Me .
The hypothesis Ho : T l = T 2 = = Tt , which is the hypothesis that there
are no treatment differences, is tested by the statistic F = Mt /s 2 . Under the
normality assumption F has, when the null hypothesis is truc, a central
F(t 1, N t) distribution; when the null hypothesis is false, the distribution
of F is a noncentral F with a noncentrality parameter ,1 = r{ Ti /2a 2 . The
test has for its critical region the upper tail of the F distribution, and the null
hypothesis is rejected if F exceeds the upper a value of F. Some authors add a
fifth column to the analysis of variance table, in which they enter values of F;
these entries are indicated by one asterisk if they exceed the 5 per cent value of F
and with two asterisks if they exceed the one percent value. We mean by the
upper a value of F( l , 2 ) the value F* defined by fF f(u) du = a where f(u)
is the probability density function of a random variable, u, having the F( 1 , 0 2 )
distribution.
This hypothesis, which may also be expressed as r = 0 where T is the vector
of the i, is of interest in uniformity trials where, for example, an agronomist
wants to ascertain whether several strains of wheat are essentially equivalent
or whether the yield of a particular variety is reasonably constant under varying
conditions. (Power calculations for the F test involve integrals for the noncentral distribution. Tang (1938) has prepared a set of tables for use in power
calculations. Subsequently, charts were made by Pearson and Hartley (1951) and
by Fox (1956). These charts are somewhat easier to use than the Tang tables.)
In many industrial situations, however, the hypothesis that there are no
treatment differences is of little interest; the scientist expects to find differences
and is more concerned with finding which treatments differ or in investigating
contrasts among the treatments.
We shall confine ourselves now to the equireplicate case with the normality
assumption and consider contrasts in the treatment effects, = ^ c,T, where
1 ct = 0 (or, equivalently 0 = c'T where c'1 = 0). The difference between two
effects, T i i-, will sometimes be called a comparison. The least squares estimate
of 0 is = 1 c iT, = c'T = 1 C,yt .; ^ is normally distributed with variance c'co 2 /r,
and an obvious test for the hypothesis 0 = 0 is Student's t test.
To carry out a t test for a hypothesis such as ri = T,. we can use a least
significant difference (LSD). We have Tt T t . = y t . y.. Under the null
hypothesis, (yi . y1 ..)/(2s 2 /r)" 2 has Student's distribution with (N t) d.f.
The hypothesis is rejected in the two-tailed test if 1 y1 . y i .. > t *(2s 2 /r) 112
where t * is the critical value of t with the desired significance level a.
The quantity t*(2s 2 /r) 112 is the LSD. The multiple t test is carried out by
comparing the treatment means and by declaring any pair of treatments whose
means differ by more than the LSD to be different.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.3]
Scheff's S Statistic 45
This is a simple and convenient procedure, but the criticism has been made
that when this LSD is applied to all possible pairs of treatments there is an
increased chance of type-one errors. The argument of the critics is essentially
that whereas it is true that the probability is 0.95 that any two observations
made at random from a normal population will differ by less than 1.96a, if we
take a sample of n > 2 observations, the probability that the largest and the
smallest of them differ by more than 1.96a is greater than 0.05 and increases
as n increases. This has led to the development of tests with the property that
the probability of a type-one error per experiment (rather than per comparison)
is a. Three such tests in common use are due to Newman (1939), Duncan (1955),
and Tukey (1953); Newman's test was revived by Keuls (1952) and is more
commonly known as the Newman-Keuls test. We shall derive Tukey's test.
Accounts of the other two tests are found in the references cited and in the books
by Federer (1955) and Miller (1966).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
taken a look at the data. The derivation of this statietic may be found in Scheff's
original paper (1953) or in his book (1959). The procedure is the following.
Let = c'T be an estimate of an estimable function 0 = c'T, and let s 2 be an
independent quadratic estimate of the variance based on a X 2 distribution with
0 d.f. We write & = c'cs 2 . Scheff's result is as follows: The probability is
(1 - a) that, for all possible estimable functions,
^-S& fr <
+S&*,
Observations
Gas
A
B
C
D
E
91.7
91.7
92.4
91.8
93.1
91.2
91.9
91.2
92.2
92.9
90.9
90.9
91.6
92.0
92.4
Total Mean
90.6
90.9
91.0
91.4
92.4
364.4
365.4
366.2
367.4
370.8
91.10
91.35
91.55
91.85
92.70
A Worked Example 47
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.4]
TABLE 3.2
ANALYSIS OF VARIANCE
Source
SS.
d.f.
MS.
19
Total 67.96 58.482 = 9.478
4 1.527 = Mt 6.78
St 64.59 58.482 = 6.108
Se 67.96 64.59 = 3.370 15 0.225 = s 2
The upper 5 per cent and 1 per cent points of F(4, 15) are 3.06 and 4.89. The
ratio Mt /Me = 6.78 exceeds both these values, and so the hypothesis Ho : r = 0
is rejected. We could put two stars after 6.78 in the F column to show that 6.78
exceeds the upper one per cent value.
It should be noted that the fact that S t + Se adds up to the total sum of
squares does not in itself provide much of a check on the calculations, because it
provides no check that the quantities Y'Y, C and T'T have been computed
correctly. If we had erroneously calculated Y'Y as 77.96, we should still have
obtained an analysis of variance table which, superficially at least, would look
valid; on the other hand, if we had mistakenly calculated T'T/4 as 54.59, that
would have given a negative value of St , which would have indicated that either
T'T/4 or C was wrong. A check can, however, be made by obtaining the sum of
the squares of the deviations Ij (yt5 y,.) 2 for each treatment and then checking
that S. = 1 Ij (yu
{
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
zl = ( 3 T1 T2 + T3 + 3T4),
z2 = (+ Tl T2 T3 + T4),
z3 =(T1 +3T2-3T3+T4).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.5]
+1
+1
0
+1
0
Tz
T3
T4
T5
Ts
+ 1 + 1 1 1 1
0
0
2
0
1
0
0+ 1
0
+1
0 +1
0
0
0
2
0
1
0
+1
The engineer can also test the Ford vs. the Plymouth if he wishes, even though
that contrast is not orthogonal to the others.
The factor used in this experiment is a qualitative factor. The experimenter is
interested in establishing and estimating the differences, if any, between the
various makes of cars. The prediction of the performance in some subsequent
run at some intermediate level of the factor, such as a hybrid of Plymouth and
Mercury, is not relevant to the experiment. However, with a quantitative factor
such as temperature, which may in a particular experiment have such levels as
100, 200, 300, or 400 degrees, we are usually interested in the whole range
covered. We might wish to use the data to predict what the response would be if
a subsequent run were to be made at 150, or even to predict where in the range
is the "best" temperature in the sense of the temperature at which the response is
either a local maximum or a local minimum.
This leads to the fitting of linear, quadratic, and higher order trend lines,
y = f(t), for predicting the response as a polynomial function of the temperature.
Consider, for example, the cubic polynomial
y = a + bt + ct 2
+ dt .
3
One approach is to fit this model to the data by least squares, test the hypothesis
d = 0, and then, if that hypothesis is accepted, to fit the reduced model
y=a+bt+ct 2 .
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
stage. We can test in the analysis of the cubic model whether the cubic term is
necessary, but unless the contraets are orthogonal we cannot test simultaneously
c = 0 and b = 0.
An alternative approach is to make use of orthogonal polynomials. This is
conveniently done if the levels of the factor are equally spaced. We illustrate the
procedure by an example. Suppose that one observation is made at each of the
five temperatures, 100, 200, 300, 400 and 500 degrees, and that we wish to fit
the cubic function
E(y)
Y1u1 +
Y2u2
+ Y3u3,
= - 2c 2 .
u2
The choice a2
= - 2, c 2 =
1, or u 2
u1 - 2, gives
=+ 2,-1,-2,-1,+2.
5a3 + 10e3 = 0,
10a3 + 34e 3 = 0,
= - 1,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.5]
y1=(-2,-1,0,+1,+2)Y/10,
Y2 = (+2, 1, 2, 1, +2)Y/14
The contrasts
(-2, 1,0, +1, +2)Y,
(+2, 1, 2, 1, +2)Y,
and
(-1,+2,0,-2,+1)Y
Year
$3.03
$3.24
$3.41
$3.69
$3.79
Linear estimate
$3.04
Quadratic estimate $3.02
Cubic estimate
$3.04
$3.24
$3.24
$3.22
$3.43
$3.45
$3.45
$3.63
$3.64
$3.66
$3.83
$3.81
$3.80
Actual earnings
$4.02
$3.97
$3.77
Notice that throughout the range of actual reported data there are only slight
differences among the linear, quadratic, and cubic estimates; the range of the
three estimates is never more than three cents. At the extrapolated point, however, the question of whether the higher order terms are included becomes more
important. Adding the quadratic term to the linear estimate reduces the estimate
by five cents; the cubic term makes a difference of twenty cents (about 5 per
cent) in the extrapolated value.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
y,
90.97
91.34
91.71
92.08
92.45
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.8]
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
mately 0.90.
where for confidence, (1 a), Xu, and XL are the upper and lower a/2 points of
the chi-square distribution with 2 d.f.
An approximate confidence interval for a can be obtained in the same way
using St and assuming that 52 = o. We should then have
[St/Xu(6 1)] s 2
Unfortunately, this method can give negative lower limits even when the F test
rejects the hypothesis a = 0. A preferable approach is to argue, as in the
previous section, that F/(1 + n 2 0) has a central F(o 1 , 0 2 ) distribution. Then
we can obtain a confidence interval with confidence (1 a) by writing
(1 + n 2 0)FL < .F < (1 + n 2 0)FLI ,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.11]
the product from the same plant, and that apart from random variation the
contents of the tanks were essentially the same. We have
Yu=i'
+tt+ei3,
where tt N(0, Q). The hypothesis Q = 0 is rejected by the F test. The point
estimates of o and a are 8 = Me = 0.225 and & = (Mt Me )/4 = 0.326.
A two-sided 95 per cent confidence interval for a is obtained in the customary
way using X 2 with 15 d.f. as follows:
3.370/27.49 < a < 3.370/6.262,
and even though Ho : o = 0 was emphatically rejected, the lower limit turns
out to be negative.
The second procedure, which was the one we recommended, has for 95 per
cent confidence Fr, = F0025 (4, 15) = 3.80 and FL = 1 /F0 025(15, 4) = 0.1155.
Then the desired confidence interval is
0.04<v<3.25.
Yi=+
Ti
+fr,
where y ij is the observation on the ith gasoline in the jth of the cars assigned to
it, T, is the effect of the ith gasoline, and f f is the random error in the observations. The f i are uncorrelated random variables with zero means and variance
o. Let us eiamine these f, f terms a little more closely.
Our assumptions imply that if we were to take several cars and observe the
octane number of gasoline A in each of them, the observations would be
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
56
[Ch. 3
scattered about the " t r u e " value of the octane number of gasoline A in a
random manner with variance a2. The scatter in the observations comes from
two sources: first, different cars rate gasolines differently; second, even in the
same car, repeated observations on the same gasoline will differ because of what
might be called the "noise" in the system or the general uncooperativeness of
nature. We can rewrite the model to take account of these two sources of
variation by splitting ftj into two terms:
yu = I* + rt + cm + e^.
Here cm is a " c a r " component which corresponds to the^'th of the cars that
were assigned to the ith gasoline.
Suppose that cw is a random variable with mean zero and variance a2, while
etj as usual has mean zero and variance a2. We have a2 = a2 + a2. We assume
also that the population from which the cars were chosen is so large that for
sampling purposes it can be regarded as infinite. Then if we were to take an
observation on a gasoline in each of r cars and average them, the variance of the
mean of the observations would be (a2 + a2)jr. The situation is analogous to
that in which d dams are assigned to a sire and a single offspring is observed
from each litter.
What would happen if, instead of taking twenty cars, we were to take four cars
and to use each gasoline once on each car? The experiment might take a little
longer because each car would now be used for five gasolines, but on the other
hand there would be fewer cars to worry about. Are there more pressing arguments in favor of this new design ? Does it give data that are in some sense better ?
As before, we estimate /* by the grand mean G/20 and (/n + T4) by the average
yt- = 2 / W 4 (to be derived shortly). Neither /*. nor T, is estimable, but, as
before, we can estimate T( rf- by yt. yv.. In the original experimental design
we had V(yt.) = of/4, and V(yt. - yv.) = 2CT?-/4. In the new design, V(yt.) is
still aj/4 so that as far as estimating p. + T( is concerned there has been no
improvement in precision in the sense that there has been no reduction in the
variance. However, V(y(. - yr.) is reduced to 2CT2/4. This reduction becomes
apparent when we rewrite the model
yu = /* +
T,
+ Cj + eu,
because car j is now they'th car for each of the gasolines, and we no longer need
to write cm. Then
+ T(
= 4(n -
T|.)
+ ci + e ~ V- -
TY
- Cj - eVj]
+ 2 ( - eVi) = 4(T, i
T(.) +
2 ew ~ 2 *<'
i
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.11]
What has happened is that the car effects have canceled out and the precision
of the estimates of treatment comparisons has been thereby increased. The same
procedure is commonly used in agronomy. Instead of dividing a field into N = rt
plots and. assigning the treatments to the plots at random, the field is first split
up into blocks that are as homogeneous as possible, and each variety is sown on
one plot in each block. Thus, each variety gets a plot on the good land, and each
gets a plot on the bad land, and so on. The term block has been retained in
standard use in all areas of application. In our experiment, each car constituted
a block. This kind of experiment is called a randomized complete block experiment or design: complete because each block contains each treatment, and
randomized because the plots are assigned to the treatments at random in each
block.
We now derive the analysis. The model for t treatments, each appearing
exactly once in each of b blocks, is
yt =+T{ +Pf+e,
;
where y { 3 is the observation on the ith treatment in the jth block. We shall
assume that the block effects, fl, are random normal variables, independently
distributed with zero means and variance ab. It does not matter, so far as our
derivation of estimates is concerned, whether the /3 are fixed or random. The
distinction is of interest when we consider applying the results of the analysis.
If the blocks can be considered as chosen at random from some population, it is
not unreasonable to suppose that the conclusions about treatment contrasts will
hold throughout the population of blocks bf which those used are regarded as
"typical. However, if the cars chosen come from a small group or if they are to
be regarded as fixed effects, there are problems when we wish to apply our results
elsewhere. Of what population are the cars used typical? Is it the population of
low priced 1969 cars? Or of all 1969 cars? Or the population of cars driven to
work by engineers in the research laboratory during the third week in July?
Just as in the case of the random samples from random batches, we have two
choices, under normality, when the blocks are random effects. We can solve the
maximum likelihood equations for the estimates of the parameters, noting that
the observations are no longer uncorrelated because cov (yij, yir.) = ab (j # j')
That approach will be taken up in the exercises at the end of this chapter.
The second approach is to act as if the / are fixed effects to obtain least squares
estimates. We shall follow the Jatter course. (Indeed, if we did not know the
distribution of the flf it would be the only course open to us.)
In vector notation the model can be written
Y = XO + e,
where 0' = (, r', (3'). The design matrix X has 1 + t + b columns. The first
column is 1 N , a column of ones, corresponding to the mean; the next t columns
are associated with treatments, and the othrs with blocks. The row for y j has
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
one in the first column, the (i + l)th column and the (1 + t + j)th column;
the other entries are zero. Columns 2 through t + 1, and columns t + 2 through
1 + t + b both add up to 1 N , and so X is of rank t + b 1.
The oormal equations are
G=N.+b f,+t>f,
4
Ti =b11+bfj +^p1 ,
B =t+^ +
{
where Bf = li yj is the sum of the observations in the jth block. Imposing the
side conditions 1 r, = 0 and 1 f f = 0, we immediately have
=G/N,
Tt=TilbA,
Pr =Bi /tA.
We note that the estimates T, are the same as they would have been without the
/3 in the model, and the nf are the same as they would have been without th Ti .
We therefore say that treatments are orthogonal to blocks. This property is a
consequence of the balance in the experiment inasmuch as every treatment
appears exactly once in every block. We shall have more to say about this
when we discuss two-factor experiments. The sum of squares for regression
SR = C + + 1 PA may be split into three forms, C, St , which we have
seen before, and a similar sum of squares S b = B C, the sum of squares
for blocks. The analysis of variante table becomes:
TABLE 3.3
ANALYSIS OF VARIANCE
Source
Total
Treatments
Blocks
Error
SS.
Y'Y C
EMS
d.f.
N-1
Tz/b C
t 1
If B, /t C
b 1
o2 + b 1, T;/(t 1)
02 + tob
Y'Y C St Sb (t 1)(b 1) a 2
The result of blocking has thus been to remove from the error sum of squares,
Se , a portion with b 1 d.f.; hopefully the amount of residual removed has
been appreciable, at least enough to compensate for reduction of d.f. for error.
With fewer d.f., the critical values of F and t will be increased.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.13]
Source
SS.
d.f.
M.S.
Total
Treatments
Blocks
Error
9.478
6.108
60.676 C = 2.194
1.176
19
4
3
12
1.527
0.731
0.098
15.6
7.46
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
he can perform the usual analysis (with some modification). There is the alternative of analyzing the data as an incomplete block experiment with unequal
block Bizes and unequal numbers of replications of the treatments. That, as will
be seen in a subsequent chapter, calls for messy calculations, and is considerably
less convenient than the procedure suggested here.
We discussed the general problem of missing plot formulae in the previous
chapter. Suppose that y jj is missing. Let T' denote the sum of the b 1 actual
observations on the ith treatment, B' the sum of the t 1 observations on the
jth block, and G' the sum of all N 1 observations. We take as our estimate of
the missing plot or observation the value u which minimizes S e when the
ordinary analysis of variance procedure is carried out on the N points (the
N 1 actual points and u). We showed in the last chapter that this was equivalent to choosing u so as to give an exact fit. In that case
_ tT' +bB' G
u (b 1)(t 1)
We are mainly concerned with comparisons y,. y,... The missing plot value
is a linear combination of the observations, and so Ti is correlated with the
other treatment totals. It can be shown that, when there is a missing observation
in the ith treatment,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 3.14]
on the growth of young pigs of some change in the standard diet, we may take
weight at six months as the response, y, and adjust it for the initial weight, x.
The adjustment is linear, and we consider here only the case of a single concomitant variable. The model that we shall take is
f: Yti = F^ + Ti + 1xt7 +
eti,
where x 15 is the measurement made on the concomitant variable on the ijth run,
or for the ijth datum point.
We introduce the following notation
E . =
(x{i xt ) 2 ;
t
E., =
E,
T, =
. =
vv =
(x,i x..) 2 ;
S, =
(Yu yt.) 2 ;
Txv = G
(x,. x..) 2 ;
(xt . x..)(Yt.
(yt. y..) 2 ;
r
S.. =
S = G > (Ytt y) 2 .
{ r
where S = T + E. We do not assume that there are necessarily the same number
of observations at each level of the factor being considered; x t . is the average of
the x measurements for the ith treatment, and x.. is the average of all N
measurements of the concomitant variable.
The most convenient computational procedure for calculating these quantities
is to carry out a one-way analysis of variance for x and for y and a parallel
calculation for xy. We then obtain, writing X.. for Nx.. and Y.. for Ny.., the
following table:
TABLE 3.5
ANALYSIS OF COVARIANCE
Source
d.f.
xy
Raw total
Mean
Treatments
Error
1, J i 4
l s I x,5Yi
l i l t Y%
1
t1
X^/N
T.
X..Y../N
T.,
Y.^/N
T.
N t
Exx
Exy
Ey
T+E
N1
S...=T...+Exx.
Sz7
Sw
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
Under this model P is estimated by = S./Sxz , and the sum of squares for
error is S = S, (S) 2 /S.
Suppose now that we have treatment effects and that the model is 0 1 . This
model implies that there is a family of parallel lines, one for each treatment.
Some of the lines may coincide; S2 o corresponds to the case in which all of
the lines coincide. The data for the ith treatment alone give an estimate bi of ,
where
b`
s
I f (xif xi.)(Yif Yi.) Q
and
V(bi) =
=
1i (xi5
xi.)2
(xi> xi .) 2
The several estimates, bi , are clearly uncorrelated because they involve different
data. The minimum variance unbiased combined estimate from them is P =
l i wibi , where the weight, wi , given to any bi is inversely proportional to V(bs ),
and wi = 1. This gives w, = I i (x 5 xt.) 2 IE. and
p = Ex /E
x.
E (E.v) 2 /E
We can now write down the analysis of variance table. The sum of squares
for treatments is the reduction in error made by fitting individual Tines rather
than a common line, i.e., SB Se
.
TABLE 3.6
ANALYSIS OF VARIANCE
Source
Total
d.f.
N 1
1
Treatments
Error
t 1
N t 1
SS
S.
(S.Y)2 /Sxx
(Sy, (SS) 2/Sxz) (E
Ey, ( E.xy) 2 /Ezx
(Exy) 2 /Exx)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
where y, is the jth block effect and i = 1, ..., t; j = 1, ..., r. We shall use
capital letters X, Y to denote totals. Thus Y{ . = y, and so on. The normai
equations are, with the side conditions
= 0, I f yf = 0,
_ {^ ^ xti r
X. YY . + N
-1
X.. Y..
t
1
X.1 t 1
X a + N 1 X }.
The coefficient of P is the sum of squares for error obtained when an analysis of
variance, including blocks, is carried out on the x, 5 . The left side of the equation
is the corresponding sum obtained from the xy terms. We write Ex x , Ezj for
these quantities and define similarly E^, Sx x , Sx v , S. We then obtain
xv xx
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 3
= (Y.. $X..)/N,
Y.. +
Y.,
The "recipe" for the calculations is thus to proceed in the same way as for the
unblocked case, using S, ,, etc., which are calculated, in the same manner used
before by analysis of variance procedures for x, y and xy, including the terms
for blocks in the computations.
Exercises
1. Six octane number determinations were made on each of five gasolines. The data
are given as follows. The columns correspond to six blocks. Analyze the data as a
randomized complete block experiment. Which gasolines differ?
Blocks
I
A
B
C
D
E
57
65
59
55
54
II III IV V VI
61
65
60
54
50
62
67
65
53
57
59
64
60
51
55
58
65
60
50
54
59
63
59
53
57
2. This data comes from a randomized complete block experiment with three blocks
and twelve treatments. The responses are the yields, in ounces, of cured tobacco
leaves. Compare the control to the average of the other treatments. [Petersen
(1952)].
Block
Treatments
1
2 3 4 5 6 7
8 9 10 11 12 (Control)
76 82 76 70 76 70 82 88 81 74 67 79
II
III
Means
70 70 73 74 73 83 74 65 67 67 67 78
80 73 77 62 86 84 80 80 81 76 79 63
75 75 75 69 78 79 79 78 76 72 71 73
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 65
3. An experiment is to be designed to compare t new treatments with a control
treatment. A one-way layout is to be used; there are to be ro observations on the
control and r observations on each of the new treatments. Show that for any given
value of N the variante of the comparisons between the control treatment and
the new treatments, V(T0 - T{), is minimized if r o = rVt.
4. Let x take the values 1, 2, 3,..., n, and let y = x2 . Show that the correlation
coefficient of x and y is given by
15(n + 1) 2
r2=
16n2 + 30n + 11'
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
Experiments
with
Two Factors
ri
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 4.1]
The levels of the car factor could be Plymouth, Ford, etc.; the levels of the
gasoline factor might be one ml/gal, 2 ml/gal, etc., of some additive like lead.
Our model is the simple additive model Y = XO + e, or
E(i ) = + ai +
P. a. P. = ai a..
This brings out the concept of the main effect of the ith level of A as the difference between the average response at the i th level of A and the average response
at all levels of A.
The comparison a a ; . is estimated by y i . y ; ... We point out again that
just as was the case in the randomized block experiment, the B effects are
canceled out in the expectation of the contrast because of the balance, or
orthogonality, that was built into the experiment by having each level of A
appear exactly once with each level of B. Similarly, the comparison fj /1 . is
estimated by y. j y. j -. Table 4.1 follows:
TABLE 4.1
ANALYSIS OF VARIANCE
Source
SS
d.f.
Total
Between levels of A
Between levels of B
Residual
1, J f y G 2 /N
Tlb G 2 /N
J J T.fla G 2 /N
1, I j y, 7-, T,?/b J t T.J/a + G 2 /N
ab 1
a 1
b 1
(a 1)(b 1)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 4
Tests of hypotheses about the a and about the /3 are carried out just as in a
randomized complete block design.
{
Observers
A
B
C
D
E
Total
1
2
3
34 76 75
33 76 72
35 78 76
34 77 71
33 77 70
169 384 364
5
7
4
6
31 61 82 82
29 60 82 84
30 65 86 88
29 60 78 83
27 59 81 82
146 305 409 419
8
67
67
66
67
67
334
9 10 Total
72 38
618
72 36
611
76 37
637
72 37
608
70 33
599
362 181 3073
TABLE 4.2
ANALYSIS OF VARIANCE
Source
d.f.
MS
Animals
Observers
Residual
Total
9
4
36
49
2149.42
20.33
2.06
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 4.2]
Definition 1. The factors A and B are said to be orthogonal if, and only if, any
comparison between averages of observations at two levels of A is orthogonal
(when considered as a linear combination of the observations) to any comparison
between the averages of observations at two levels of B.
Definition 2. A and B are orthogonal if, and only if, the estimate of any contrast
in the parameters a i is the same whether or not the parameters /3 are included in
the model, and vice versa.
We shall consider in particular two levels, h and i, of A and two levels, j and k,
of B. The corresponding totals of the observations at these levels are T h ., T,.,
T. 1 , T. k ; the sum of the observations at the hth level of A and the jth level of B
is Thf . Let there be n,^ 5 observations in the (hj)th cell with marginal totals n,^. and
n. 5 , and N observations altogether.
Suppose that A and B are orthogonal by Definition 1. Then yh . yi . is orthogonal to y., y. k . Consider the equivalent contrasts n { .Th . n h .T{ . and
n. k T. j n. I T. k . The only observations that appear in both contrasts are those in
the cell totals Thj , Thk, T, j , Tik , and we rewrite the contrasts
n { .Thj + n i .Thk nh .Tlj nh.Tik,
and so on.
These are orthogonal as contrasts in the observations if, and only if,
n { n kn hf n i .n. jn hk n h n. knt1 + n h .n. 1nik = 0,
or,
n{.(n.knhj n.inhk) = n h .(n. kn ij n.jnik).
Such equations hold for all pairs h, i and j, k. Summing over all values of k,
including k = j, gives
nt .(Nnh1 n. Jn h .) = n h .(Nnti n.jni.);
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 4
(4.1)
E(Y) = 1 + X l a,
(4.2)
where X = (1, X 1 , X 2), and a and P are the vectors of main effects.
Under model (4.2) we have a one-way layout and the least squares estimate of
ah ai is y,,. y,.. Consider the estimable function 0 = n h .n { .(a h a,). Its
least squares estimate is = n,.Th . n h .T,.. Since the least squares estimates are
the unique minimum variance unbiased estimates, and since any linear combination of the observations which is an unbiased estimate of 0 under model
(4.1) will also be unbiased under model (4.2), it follows that 1 is the least squares
estimate of 0 under (4.1) if, and only if, it is unbiased. Under model (4.1)
E(^) = nh.ni.(ah aj) +
(n,.nhj nh.ntr)Nr,
and is unbiased if, and only if, n{.nh f n h .n, f = 0 for each j. Summing over all
values of h leads to the condition of proportional frequencies.
Conversely, if the condition of proportional frequencies is satisfied and the
side conditions 1, n,.a{ = 0 and > n., 5 = 0 are used in the standard least
squares procedure, it is easily seen that the least squares estimates of and a i are
y and y,. y under both models.
Under model (4.2) we may subdivide the sum of squares for regression into
two components S() and S(aI), where S() = G 2 IN. Under model (4.1)
we can have three components S(), and S(aI), as before, and the extra portion
S( , a). If A and B are orthogonal, S(I ) = S(Sl , a).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 4.3]
0.5 ON higher than gasoline 2, so will every other car. Similarly, if the Plymouth
gives a rating to gasoline 1 that is one ON higher than the rating given by the
Ford, then the Plymouth will rate each gasoline (apart from the random error)
at one ON higher than the Ford rates them. This simple additive model may not
be adequate. The failure of the differences between the responses at the different
levels of A to remain constant over the different levels of B is attributed to
interaction between the two factors. To take this into account, we add an extra
term to the model.
We now consider the situation in which there are n observations at each
combination of levels of A and B, i.e., n observations in each cell. The new
model is
Yuk = + a t + P1 + (aP) {f + eilk , 1 < i < a, 1 < j < b, 1 < k < n,
where yifk is the kth observation at the ith level of A and the jth level of B and
ei1k is the error term; , ai , P1 are as we defined them before, and (as) ti is the
interaction term. There are ab such interaction terms. The design matrix X has
abn rows and ab + a + b + 1 columns. The rank of X is ab.
We can approach the subdivision of the total sum of squares into component
sums of squares in two equivalent ways. One approach is to argue that basically
we have a one-way layout with n observations on each of ab treatments, a
treatment being in this context a combination of a level of A and a level of B.
Analyzing the experiment in this way gives a sum of squares for treatments
St = l t ^ f T1 ./n C where T11. = I k Y41k and C = G 2 /N. (We shall now
write Ti .., T.,. for the sums l f I k Ytik, ^t Ik Yuk) Differences between levels of
A account for an amount S A ; differences between the levels of B account for
another SB ; the remainder St SA SB must result from interaction.
The other approach is to consider three regression models:
Ytlk = + at + jJ + (af1)u + eifk (4.3)
(If we impose the side conditions a, = 0 for each i and P, = 0 for each j, we
obtain the oneway layout, and S R = St + C):
Ytrk = FJ + a s + S ! + e tik ;
Yuk = i& + a i
(4.4)
eijk.
(4.5)
The reduction in Se at each stage gives us the desired sum of squares, and, with
the appropriate divisor (aa), the conditions of Cochran's Theorem are satisfied
when normality is assumed so that the forms have independent x 2 distributions.
In solving the normal equations under model (4.3), we impose the side conditions = 0, I f Si = 0, Ii (af1) 1J = 0 for each i, and 1t (af1), f = 0 for each j.
This actually amounts to only a + b + 1 conditions because the conditions
imposed upon the interaction terms are not independent; each of the two sets
[Ch. 4
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
implies li I j (aa) i5 = 0. With these side conditions, the estimates of the parameters are =9,& = yt .. 9 where y,.. = T{ ../bn, ,^, =y.. -7, and ( 1 =
yi1. y t .. y.,. + y where yif. = T,1 ./n.
TABLE 4.3
ANALYSIS OF VARIANCE
EMS
d.f.
SS
Source
Total
li G1 Gk Y
4 1k C
abn 1
l i T,?./bn C = SA
a1
a2 + bna 2
J, T../an C = SB
1, J, T!./n C S A SB = SAa
b1
(a 1)(b 1)
a2 + anaB
aa + na8
lt I1 Ik Ys1k lt St T 5./n
ab(n 1)
Interaction
Error
aa
The sum of squares for interaction may be derived in two ways. It is the
difference between the sum of squares for regression with the model of a one-way
layout with ab treatments and the sums of squares attributable to A and B, i.e.,
n -^^, ^1 C S A SB . Alternatively, the equation SR = IPX!'IY derived in
Chapter 2 may be rewritten as SR = l i Pt (l1 x{1y,) where 1 xy1 is the single
term on the left side of the normal equation corresponding to P { . With all the x, i
being zero or one, X'Y is the vector of totals, and so we have
SA =
Ti .. tl SB = L T.5., SAS =
Tt1( ^)t1
(yi1.y1..y.1.+9)2=n
or else
SAB =n
( (yu.
an (y.1. 9) 2 ,
which expresses SAB in terms of the variante of the estimates of a{ over the
several levels of B.
The expectations of the mean squares require a word of explanation. Our,side
conditions simplify the computations. Thus we have
G = Np + bn a4 + an 1 P 1 + nl 1(afl)t1 + 1 E es>k,
1
1 f
ik
+ aa
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 4.4]
yt
Y=at+et..
e...;
E(y) = Po +
3toxi
t=^
a b
boix +
i1
Ptixix,
1=15=1
where x l and x 2 are coordinates for the levels of A and B respectively. Replacing
xi by the ith degree orthogonal polynomial for a levels, u t , and x by the corresponding polynomial vi , we obtain
E(y) = Yo + 1 Ytout + 1 Yoivi + 1 Ytiutvi
The estimates of the yti are orthogonal contrasts. The contrasts corresponding to
yto and yoi are the linear, quadratic, cubic, and so on contrasts for A and B and
[Ch. 4
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Yates (1937, p. 36) gives the data for an experiment carried out at Rothamsted
with two factors, varieties of oats (A) and quantity of manure (B). There were
three varieties of oats; four levels of manure were used, 0, 0.2, 0.4, 0.6 cwt per
acre. The figures given are the celi totals for six plots per cell; the recorded
responses are yields measured in quarter pounds per plot. Although the oats
factor (A) was not quantitative, it is nevertheless instructive to compute the
sums of squares for the several components of interaction.
B1
B2
Al
Az
A3
429
480
520
538
591
651
Total
1429
1780
B3
B4
665
711
688
749
703
761
205 6 2221
Total
2343
2508
2635
7486
It is important to remember that these are cell totals, and the factor n = 6 must
appear in the denominator of each sum of squares; C, for example, is 7486 1 /72 =
778336.06.
The eleven degrees of freedom between cells are partitioned in the ordinary
analysis of variance table into
TABLE 4.4
ANALYSIS OF VAIUANCE
Source
SS
d.f.
Total
22128.61
1786.36
20020.50
321.75
11
2
3
6
A
B
AxB
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 4.5]
Al
Aa
A3
lin A
quad A
B divisors
'
lin B
quad B
cub B
973
904
63
50
73
10
36
4
99
22
85
184
30
20
775
198
60
20
A divisor
2
6
The value of the lin A x lin B term is large, and we note that the lin B
contrast decreases as we change levels of A: 973, 904, 775. (If we had interchanged varieties 2 and 3, this inconsistency of the lin B contrast would have
been manifested as a large quad A x lin B interaction; however, A is not really
a quantitative factor.) It would appear that the increase in the response caused by
using extra manure is greater for A l than for A 3
-
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 4
There is not much that we can do about problem (i) except to assume that
vAB = 0 and to comfort ourselves with the thought that if our assumption were
incorrect we should be erring on the conservative side because s 2 would tend to
be larger than a2 . Thus, it would take a larger value of 1 a? or of fl than
otherwise to provide a significant F ratio.
In regard to problem (ii), Tukey (1949) has suggested a method of obtaining a
sum of squares with one degree of freedom to test the hypothesis a = 0.
He takes the sum of squares for one of the interaction contrasts, a'Tb where
a' = (... , y .. y, ...) and b' _ (... , y. j . y, ... ). He gives an example in
his paper in which he replaces the response y ijk in a layout where c S is small
by zirk = He thereby obtains a situation in which there is a large interaction
sum of squares, much of which is absorbed in this single degree of freedom.
In practical applications we can more easily compute Tukey's statistic as
{
T* _
+ at + bf + (ab)i1 +
where y, ik , , and e, ik are defined as they were for the fixed effects case; ai , bj , and
(ab), f are uncorrelated random variables (as usual, we require normality, and,
hence, independence, when we test hypotheses) with zero means and variances
4, o, and 4B respectively.
We write
a. = a
l at ,
b. =
1i b lb ,
f
e{ f . = n
-1
1k e,rk,
e,.. =
b '
ei f .,
(ab),.
= b'
1
(ab)ii,
e... =
N1
1 t 1 k
e.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 4.7]
Then we also have yti . = T 1 ./n, yi .. _ (bn) - 'Ti .., y. f . = ( an) - 'T. 1 . and y = GEN.
In computing E(SA), we again note that SA = nb (y f .. y) 2 ;
y{ ..y=
+ a,+b.+(ab),.+e,..a.b.(ab)..e...
+ natB + bna).
Similarly, we obtain
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 4
particularly by Wilk and Kempthorne (1955) and (1956), by Scheff (1956a and b),
and by Cornfield and Tukey (1956). The approaches of Cornfield and Tukey and
of Wilk and Kempthorne involve deriving the expected values on the assumption
that the levels of the fixed factor A are a random sample of size a from a finite
population of size p, and then putting p equal to a. We shall follow Scheff's
derivation. Again, we take the breakdown into sums of squares derived for the
fixed effects case, and concern ourselves with the expected values of those sums
of squares under the new conditions.
The new model is
Yifk=
+ ai
+b!
+Cij
+eifk;
Yuk, , b1 , and e, i ,, are defined in the same way as in the random effects model,
and the bi and the eifk are all uncorrelated; the effects at are unknown constants
subject to the side condition 1 a, = 0; c, i is the interaction term.
The interactions c15 are random variables: they involve a random factor B.
They are not correlated with any of the bi or the etfk . However, bearing in mind
that for the fixed effects a, we have 1 ai = 0, we impose a similar condition
c, 5 = 0 for each j upon the interaction terms. Consequently, the c{j are, for
any given j, correlated with each other. It is convenient to write V(c 1) as
(a 1 )aS/a.
,. . . ,
.
Lemma. Let x l , x2
x, be a set of random variables having the same variance
a2 and the same covariances pat, and being subject to the condition x, = const;
then p = (n 1) -1
PR00F. We have V(I x,) = na 2 + n(n l)pQa. But 1 x, = const implies
that V(I xi) = 0. Hence, n(1 + (n l)p)a 2 0, and so p = (n 1) -1
Applying this lemma to the c,i , with n = a and a2 = (a l)o S /a, we have
for i 96 i', j 0 j'
Is (Yt.. y) .
2
at+ci.+ei..e...,
4.6)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 4.7]
(4.7)
Ss = an (Y.. y) a .
(y.,.
Y)=a.
a.+b5
=b f b.+e. 1 .e...,
and
E(MB) = aa + an4B.
Sas = n
^ r
(4.8)
(Y,1. y{ .. Y.J. + 7) 2 ,
where
(Yii. y,.. y. i . + y) = c, f c{ . + (et1 . e,.. e. j . + e...) .
The error term is the same term that appears in the earlier models; its contribution to E(SAB ) is (a 1)(b l)a 2 . E{I5 (cij c,.) 2 } = (b 1)V(c 15) for each i.
Hence, E(SAB ) = (a 1)(b 1)(a 2 + nO B ), and
E(MAB) = a 2 + na.
(4.9)
b/R) (6 + bna4,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 4
where q denotes the number of levels of B in the population of levels from which
the experimenter chose the b levels actually used.
Then, if B is fixed, b = q and (1 b/q) = 0; but, if B is random, q = co and
(1 b/q) = 1. We may also picture ourselves, when looking at the main effects
of A, as averaging the interactions cij over all the levels of B that were used. If B
is fixed, then we have averaged over all possible levels of B, and the interaction
terms "cancel out"; on the other hand, if Bis a random factor, we are averaging
over only a fraction of the levels of B, and it would not be reasonable to assume
that the interactions average out in any given experiment.
where bi is the effect of the ith batch, s, ) is the effect of the jth sample in the ith
batch, and ek(tn is the observational error.
If we assume to begin with that , b, and s,( , ) are all fixed, we have bs samples
and 1 + b + bs parameters. We impose side conditions 1i b, = 0 and I1 sf( , ) = 0
for each i. Then, if yij . and y,.. denote the sample and batch means,
= Y,
bi = Yi.. Y,
where N = bsn. Regarding the set-up as a one-way layout with bs samples and
n observations pet sample gives a sum of squares
SR =T1. /n
Ga /N.
Then, subtracting, we have the sum of squares for samples within batches, as
Ss in a = SS(B) _
T>ln
i 1
Tt?ln s ;
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 4.9]
and also
Se =
r k
Yttk
Tiran.
t
Alternatively, we may argue that SB = l t Fi{ T.. and Ss(B) _ ^{ ^ i sj(, ) Tf .. The
etension to more than two stages is obvious.
If either of the two factors is random, we take the same breakdown into sums
of squares. The most common situation is that in which S is a random effect, the
sf(, ) being (normally) distributed with mean zero and variance oi. We write v
for V(e, Jk ). We shall assume that the batches are distributed with mean zero and
variance az. An example from genetics is the case of s sires being chosen and
each of them being mated to d dams (there being ds dams altogether); then n
siblings are chosen from each of the ds litters. The expectations of the mean
squares are given in Table 4.5.
TABLE 4.5
ANALYSIS OF VARIANCE
Source
SS
d.f.
Total
N-1
LL I kYlk-C
2, T2./dn C
Between sires
s 1
Dams in sires
li 2 1 Taf ./n 2, T?./dn
s(d 1)
Between siblings 1, I f l kYuk l+ 1i T./n sd(n 1)
EMS
a + na + dna 2
a + noi
ao
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 4
which the ith line is the male line and the jth line is the female line and the
reciprocal cross withj as the male line and i as the female line. In methods 2 and
4 the differences between reciprocal crosses are ignored. We shall consider
method 4, which is the simplest one, in detail, and confine ourselves to only a few
remarks about the others.
In Griffing's method 4 all p(p 1)/2 crosses are made. From each cross n
offspring are taken and some response, such as the yield or the number of
bristles, is observed; Y, ik denotes the kth observation on the cross between the
ith and jth lines. The model is
y, ik =m+gi +gi +s{i +e, ik , 1 <i<j<p, 1 <k<n,
where g, and g; are the general combining abilities of the ith and jth lines,
s is the specific combining ability of the pair of lines, m is a general mean, and
e{ik is a random error term with the usual assumptions.
We consider first the fixed effects model in which the parameters g { , st , and.m
are unknown constants. Let Y; denote the sum of all the observations on all
offspring from crosses made with the ith line; YY1 denotes the sum of all the
observations on the i x j cross, i.e., Yt1 = y. Let G denote the sum of all
the observations. Since each observation y, fk appears in the two totals Yt and Yi ,
we have 2G = Y. When we write 1 1 s ii the summation will be over all i
and j with i < j; there is no term si{ .
The oormal equations are
G=Nm+ n(p 1) +
where 2N = np(p 1),
ti
and
=nm+ngt+ng1+nsii.
Imposing the side conditions _7, g; = 0, I f stj = 0 for each i, we obtain the
estimates
m = GIN,
gu = YY/ n g^ gi m.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 4.9]
Sg
yi81=
Ya
4G2
n(p -2 ) np(p - 2)
Yii^{j =
n ya2
Y12 2G2
n(p
2) + n(p 1 )(p 2)
E(Y? ) = n 2(p 1 ) 2m 2 + n 2 (p 1 ) 2 a 2
+ n 2 (p 1)a + n 2(p 1)a$ + n(p 1)a
= n 2 (p 1 ) 2m 2 + n 2p(p 1 ) a + n 2(p 1 )a + n(p 1 ),
E(Y f) = n 2m 2 + 2n 2 a + n 2 a + na.
It follows that
np(p 2)E(S9) = p 1 E( Y?) 4E(G 2) = p 2E(Ya) 4E(G 2)
n 2p(p 1 )(p 2) 2 a + n 2p(p 1 )(p 2)a,
+ np(p 1 )(p 2)4
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 4
In the general case of method 1, in which the reciprocal crosses and the
parental lines are included, the model assumed by Griffing is
Ytrk = m + gt + Sr + st) + rti + etrk,
1_<i<p, 1<j<p, 1<k<n.
Here y, jk denotes the kth observation on the cross with i as the male line and j
as the female line; the specific combining ability s, is symmetric, s,i = s5{ . The
reciprocal effect, rt ,, accounts for the difference between the i x j and j x i
crosses, and is antisymmetric, rtj = rfi .
We define the totals Yt . = I i I k Ytrk, Y> = ^t I k Ytjk, and Y 5 . = I k Yt,kThen the estimates of the parameters in the fixed effects case are given by the
equations
(i 0 j),
np a gtt = p 2 Y0 . p(YY . + Y. t ) + G.
The models for the other two methods may be derived from that of method 1
by dropping the unnecessary terms. The analyses follow the same lines.
Exercises
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 85
7. Ina two-way layout the factors A and B are fixed and the cell frequencies satisfy the
condition of proportional frequencies. Derive the analysis with AB interaction
terms.
8. Batchelder et al. (1966) investigated the growth of tobacco. They grew tobacco in
four different soils (blocks) with three different mulches, A, B, and C, and continued the experiment for three years. The data were analyzed as a two-factor
experiment, years Y and mulches M in four randomized blocks. The data which
follow are yields in pounds per acre. A was a control (no mulch at all); blocks 1 and
II were a different type of soil from blocks III and IV. Show that the soms of
squares for mulches, years, and blocks each have one large contrast that accounts
for most of the sum. What conclusions would you draw from this?
Blocks
Year
Mulch
II
III
IV
A
1962
984
1440
1324
421
1276
1232
563
1016
1064
862
880
1016
1539
2141
1939
1039
1894
1833
914
1819
2394
1032
1675
2055
1607
1860
1846
1461
1912
1973
1593
1703
1043
1507
1378
1319
C
A
1963
C
A
1964
9. The following data are yields, in grams per plot, in diallel crosses between inbred
lines of winter beans [Bond (1966)]. He planted all crosses between six inbred lines,
and also the inbred lines themselves, a total of 36 varieties in all. The yields
reported are the mean values over two years. Analyze the data under Griffing's
model 1, both with fixed effects and with random effects.
Male Parent
Female
Parent
24
31
36
55
64
67
24
31
36
55
64
67
172.8
247.7
267.5
301.7
267.5
262.0
279.5
177.8
274.0
278.5
253.0
274.3
277.2
258.5
236.0
269.5
248.0
254.5
278.2
263.3
250.7
224.2
267.2
259.8
279.8
303.2
258.5
260.5
208.2
281.8
315.0
313.2
256.7
285.5
287.5
221.3
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
Experiments
with
Several Factors
The results obtained in the previous chapter can be extended to larger experiments involving more than two factors. The simplest situation is the complete
factorial experiment in which all the factors are fixed and crossed. This is a
routine extension of the two-way crossed classification. The term crossed
classification is used to denote that each factor is crossed with the others:
factor A cuts across factor B in the sense that each level of factor A appears with
each level of factor B.
We shall see that in the crossed classification with some of the factors random
complications can arise about the Ftests. In some cases, no one mean square will
provide a suitable denominator for the F statistic to test a hypothesis, and a
denominator has to be put together from several mean squares. We shall also
consider designs that contain both crossed and nested factors. A set of rules will be
given for deriving the degrees of freedom, sums of squares, and the expectations
of the mean squares. The chapter ends with a short discussion, including some
examples, of split-plot and split-split-plot designs. Before proceeding further, it
is appropriate to make a few remarks about error terms, pooling, and replicates.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 5.2]
Replicates 87
highest order interaction (the interaction between all the factors) is taken to be
zero, a priori. If the experimenter does not want to assume this in any case
except that in which all the effects are random, he will have to find some way of
duplicating his observations to obtain an unbiased estimate of error. If several
of the factors are at more than two levels, this procedure of ignoring the highest
order interaction will provide an error term with a reasonable number of
degrees of freedom.
If an experiment involves four factors, each at four levels, the ABCD interaction will have 3 4 = 81 d.f. Assuming the effects to be fixed, the critical value
of F for testing the hypothesis that the main effects for A are zero, using a = 0.05,
is F *(3, 81), which is approximately 2.7. If the factors are at only three levels
each, we should have 16 d.f. for ABCD and F *(3, 16) = 3.24, which means
that we should need a 20 per cent larger F value in order to detect differences
between the levels of A, a considerable decrease in power. If all the factors are at
two levels each, there will only be a single degree of freedom for each of the mean
squares. In the Jatter circumstances, the experimenter is going to be rather
desperate for degrees of freedom in the denominators of his F statistirs, and it is
customary in such experiments to assume, in the absence of information to
the contrary, that all interactions involving more than two factors are negligible,
a priori, and to pool their sums of squares to obtain an error term. We shall
tacitly make that assumption in the later chapters when we discuss experiments
with factors at two or three levels.
The pooling of interaction sums of squares to provide an error term is a
subjective matter. On the one hand, purists can deplore the use of a possibly
biased denominator and a possibly invalid F statistic. On the other hand, the
practical man can hardly be condemned for making use of reasonable assumptions to obtain enough degrees of freedom in the denominator for his F test to
have enough power to be useful. What is important is that the experimenter
should use his common sense. There used to be a popular procedure, which has
hopefully passed into disuse, by which the experimenter would start his F tests
at the foot of the table, testing the mean square in the next to last line against the
mean square for the error. If the ratio was larger than the critical value of F,
he recorded the fact in the right-hand column and moved on to the next line.
If the ratio was not significant, he pooled the sum of squares with the error
term and went on to the next line. So he continued up the table automatically
pooling every sum of squares that was not significant, oblivious to the fact that
just because the F ratio is not quite big enough for significance it does not
necessarily follow that the hypothesis is true and that if you pool a sum of
squares that is almost large enough to be significant you will inflte your error
estimate and bias it upward.
5.2 Replicates
The word replicate (or replication) commonly occurs in the jargon of experimental design, but its meaning is not always the same. When in later chapters we
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 5
_7
The three-factor interaction essentially takes in all the scatter in the cell means
that is not explained by the main effects and the two-factor interactions. Its sum
of squares can also be derived by considering the variation in the sums of
squares for AB interaction at the several levels of C (or equivalently the AC
interaction at the levels of B, or the BC interaction at the levels of A).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 5.3]
In the fixed effects case, the analysis follows the same lines as that of the twofactor experiment. The side conditions imposed are
lat =0,
b1 = 0,
(ab)t, = 0,
Ck
0;
(ab)t1 = 0,
(ac)tk = 0;
k
(ac)tk =
0,
k
(bc) 1k = 0 ,
(bc) 1k = 0 ;
(abc)11k = 0 .
(abc) t1k = 0 ,
(abc)uk = 0 ,
F^ =7,
(abC) t5k
witha 1 d.f.,
SAB=Tu../cn C SA SB,
t
nUABC
E(M8) = aa.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 5
For the mixed model, we recall that in the two-factor case with A fixed and B
random, the term oM B did not appear in E(MB ) because for each level of B the
interactions were averaged over the entire set of levels of the fixed factor A.
On the other hand, O B did appear in E(MA ) because for each level of A the
interactions were averaged over only those b levels of B that were (randomly)
chosen from the infinite population.
With this in mind, we can formulate a set of rules for writing down the
expectations of the mean squares in the complete factorial experiment which are
applicable to any number of factors, fixed or random.
1. Each expected mean square contains a term aa.
2. Each component of variance has some letters as subscripts. The coefficient
of a component in any expectation is the product of all the letters that are not
among its subscripts. Thus, in the three-factor case we have the four letters
a, b, c, and n. The coefficient of Q B whenever it appears is the product cn;
similarly, we have fla Bc and bcn4 The coefficient is the number of observations
contained in the corresponding total, such as Ti ,...
3. If all the factors in an experiment are random, the expectation of a mean
square consists of o 2 together with all the terms for effects and interactions
containing all the letters in the name of the mean square in question. Thus,
E(MAB) contains terms for all components with both A and B among the
subscripts, e.g., a 2 + nUBC + cnO9.
4. If some of the factors are fixed, we strike out in the expectation of any mean
square all those components which have amng their subscripts any letters,
other than those in the name of the mean square, which correspond to fixed
factors. For example, in the three-factor case we have, when all three factors are
random,
E(MA) = a2 +
noec
= a 2 + cna$ + bcna.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 5.3]
A
B
C
AB
AC
BC
ABC
Error
a2 + naABC
a2 + naac
a2 + naBC
a2 + na4ac
a2 + na aicc
a2 + noBC
a2 + naec
a2
*
MABC
MABC
MABC
Me
AB
AC
BC
ABC
a2 + cnaB
a2 + cna3e
a2 + noAac
a2 + Cnca
a2 + naBC
a2 + naac
a2 + naBC
Error
a2
A
B
+ bcna
+ acna4
+ bnac
MAB
MAB
+ analc
+ abn4
Me
+ bnac
+ anac
MABC
MABC
MB
C
AB
AC
BC
ABC
Error
a2+bcna
aa+Cna +acna8
a2 + bnac + abnvc
a2 + cnaB
a2 + bncc
a2 + naec + analc
aa + naABC
a2
M,
MAB
Mnc
Me
Me
MABC
MB
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 5
plants in each group grown under the various conditions. We have multiplied
the data by 100.
No N1
Po
P1
P2
N2
Ko
Ki
K2
Ko
Ki
K2
Ko
ICi
K2
8876
8745
8601
9141
9827
10420
9785
9585
9009
9483
8457
8106
10049
9720
12080
9975
11230
10877
9990
9298
9472
10023
10777
11839
10451
11094
10287
Source
Nitrogen
Potassium
Phosphorus
NxK
NxP
KxP
NxKxP
SS
488.3675
1090.6564
49.1485
142.5844
32.3475
592.6238
185.7762
d.f.
2
2
2
4
4
4
8
u= MAB +MacMARC,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 5.4]
Approximate F Tests 93
and take as our test statistic 9' = MA/u. MA (a 1)/E(MA) has a Xa(a 1)
distribution, and MA and u are independent. We now need to find the approximate distribution of u.
It will be recalled that in the simpler case of the one-way layout with n
observations per cell and random effects our test statistic was
.'F = MA/Me .
, _ b
A 1 SA l (a a
+ naA2)
aa
MA
ce 'Se/a 2 aa + naA2 Me
F(#A, #)
[E(MAB )]2
0AB
[E(MAB )]2
.2
6AB = 2
6AB
If we fit p and by letting E(u) = E(pz) = p and V(u) = p 2 V(z) = 2p 20, then
E(MAB + MAC MABC) =p6 = E(u) and V(MAB)+V(MAC)+V(MAsc)=2p2C=
V(u), so that 0 = 2 [E(u)] 2 / V(u) and p = 0 - 'E(u). Unfortunately, we are
and
pa^
__ Ma
MAC M BC
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 5
so that,
MA __ SA __ E(MA) ,
SA , ^ = E(M4)
. F(a 1, ^)
u
(a 1)zp
p^
(a 1)E(MA ) z
E(u)
The other cases are handled in a similar fashion.
The batches are nested within the methods (of pretreatment). The temperatures
are crossed with the batches and, therefore, with the methods.
In the formulation of the model (we assume to begin with that all the effects
are fixed), is a grand mean and at is the main effect of the ith level of the first
factor; ai represents the difference between the expected average response on all
ben runs made on stock pretreated by the ith method and the grand mean ,
i.e., ai = E(y( ...) . We have the side condition l i ai = 0. The b batches made
by the ith method may differ; bf(() denotes the main effect of the jth batch in the
ith method. It is the difference between the expected average response of all cn
runs made on stock taken from the (ij)th batch and the expected average for all
the batches made by the ith method, i.e., bf(() = E(y ii .. yj ...). It follows that
Ii bt(() = 0 for each 1. The main effects of the levels of temperature are denoted
by C k ; we have ck = E(y.. k .) , the averages being taken over every batch
from every method, and I k Ck = 0.
There are two interaction terms. The method x temperature interaction
(ac) ik represents nonadditivity between methods and temperatures. Perhaps
changing from temperature 1 to temperature 2 produces a greater change in
response on feed stock pretreated by method 1 than on feed stock pretreated by
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 5.5]
SS
Source
Total
d.f.
Y'Y C
abcn 1
T,,../cnC=SB
4
ab-1
T?k,/abn C = ST c
BC
T,k./n C SB ST (c 1)(ab 1)
4 1 k
SB By subtraction
abc(n 1)
The sum of squares for batches falls into two components, just as in the ordinary
nested design.
SA = 1, Ti?../bcn C is the sum of squares between (or for) methods.
SB(A) = lt Ij T,ll ../cn l i T../bcn is the remainder, and is attributable to
differences between batches made by the same method.
A similar process of subdivision can now be applied to the interaction sum of
squares. We divide SBC into two components; SAC is the sum of squares for
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 5
TABLE 5.4
EXPECTED MEAN SQUARES
EMS
d.f.
SS
+ cn4(A) + bcncA
SA
a1
a2
SB(A)
a(b 1)
a' + CnaB(A)
Sc
c1
02 + n4 c(A) + abnac
SAC
(a 1)(c 1)
SBc(A)
a(b 1)(c 1)
a 2 + naBC(A) + bnaA C
a 2 + n4C(A)
Se
abc(n 1)
02
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 5.6]
2. For each term or effect in the model (we let the word effect now embrace
both main effects and interactions), we divide the subscripts into three classes:
(a) livethose subscripts that are present in the term and are not bracketed;
(b) deadthose that are present and bracketed; (c) absentthose subscripts
that appear in the model but not in the particular term. Thus, in bc;k( ), j and k
are live, i is dead, and m is absent. We then form the symbolic product for the
term, in which Bach dead subscript is represented by its letter and each live
subscript by its letter minus one. For (bc) ;k(j) the symbolic product is i(j 1)
x (k 1).
3. The corresponding product in the numbers of levels, e.g., a(b 1)(c 1),
gives the number of degrees of freedom for the sum of squares.
4. Expanding the symbolic product, we obtain (ijk ij ik + i). The
corresponding sum of squares is 1(yi;k. Yij. Yi.k + y{...) 2 or
Tj tik
J ^ n
TZ ti
J cn
TZ{"'
T2 ik
11 bn + { ""
Similarly, we have for the main effect A the product (i 1), which gives
1 T?..
S,4 = (bcn)
C.
TABLE 5.5
AUXILIARY TABLE
i ja k' mn
i
j(i)
ik
jk(i)
m(ijk)
(i) In any row, write the number of levels in any column headed by a letter
which is an absent subscript.
(ii) Write 1 if the column is headed by a dead subscript.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 5
= a 2 + n4C(A) + bnaAC.
Split-Plot Designs 99
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 5.7]
and 0.03 tons per acre. The main treatments were the varieties of oats and the
subtreatments were the levels of nitrogen. The data and the analysis of variance
table are given below. The sum of squares for whole-plot error is the same as the
sum of squares for block x varieties interaction. In practice, the necessary sums
of squares can be obtained on a computer by using a program for a three-factor
experiment with factors A (oats), N (nitrogen), C (blocks), and one observation
per cel!. Then Se = SNC + SANC
Block
nl
n2
n3
n4
Block n l
n2
n3
n4
Al
AZ
A3
111
117
105
130
114
140
157
161
118
174
141
156
II
74
64
70
89
103
89
81
132
104
122
133
117
III
AI
A2
A3
61
70
96
91
108
124
97
126
121
100
149
144
IV
62
80
63
90
82
70
100
94
109
116
126
99
Al
A2
A3
68
64
102
129
112
89
132
86
96
124
VI
53
89
97
74
82
99
118
86
119
113
104
121
60
89
TABLE 5.6
ANALYSIS OF VARIANCE
Source
SS
d.f.
Total
51985.95
71
Blocks
Varieties
Whole plot error
Between whole plots
15875.28
1786.36
6013.30
5
2
10
23674.94
17
Nitrogen
20020.50
321.75
7968.76
3
6
45
NxV
Subplot error
MS
3175.06
893.18
601.33
6673.50
53.63
177.08
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 5
Split-Split-Plot Designs
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 5.8]
101
II
I
75.1,
65.4,
61.9,
69.4,
75.2
62.7
60.1
70.1
69.0,
63.3,
57.7,
60.7,
IV
III
63.5
61.2
59.6
57.0
74.3,
59.4,
74.4,
57.0,
80.7
65.3
75.8
54.5
51.2,
62.9,
62.9,
56.6,
46.7
62.1
55.3
49.5
V
72.6,
63.8,
54.3,
64.3,
71.0
63.1
58.3
63.3
TABLE 5.7
ANALYSIS OF VARIANCE
Source
Methods (M)
Goats (G)
Periods (P)
MxG
MxP
GxP
MxGxP
Total
SS
d.f.
11.03
328.44
760.13
10.23
67.27
1090.77
57.99
2325.86
1
3
4
3
4
12
12
39
MS F values
11.03
109.48
190.03
3.41
16.82
90.90
4.83
2.28
1.20
2.09
0.71
3.48
18.82
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 5
He chose seven varieties of flax with three formulations of 2,4-D and four
rates of application. There were four replications in the experiment. Each
replicate involved twelve blocks, each with seven plots, so that there were 336
plots altogether. One plot in each block was sown with each variety of flax.
The three formulations of 2,4-D were made up, and four blocks in each replicate
were assigned to each formulation. The 2,4-D was then applied to one of the
blocks at the lowest rate, to another at the second rate, and so on. In any block,
each of the seven plots received the same formulation at the same rate. In the
split-split-plot context there are twelve whole plots with formulations as the
whole-plot factor. Each of the whole plots is split into four subplots (the blocks),
with rates of application as the subplot factor. Each subplot is split into seven
sub-subplots with flax as the sub-subplot factor. The sources of variation and
the degrees of freedom for their sums of squares are
Replications
F = formulations
Reps x F= Error (a)
R = Rates
RxF
Error (b)
V
VxF
VxR
VxRxF
Error (c)
3
2
6
3
6
27
6
12
18
36
216
He obtained his error (b) term for testing R and R x F by pooling the sums of
squares for reps x R and reps x R x F. The sum of squares for error (c) is
obtained by subtraction and consists of everything that has not been used
already. As usual, it is assumed that replications do not interact with any of the
other factors.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 103
level of A and the jth level of B, we suppose it to be at the k th level of a third
factor, C. The computer program then gives the correct sums of squares SA , SB ,
and SAB . The error term is obtained by adding Sc, S c , SBC, and SABC . If the
experiment is blocked, Sc is the sum of squares for blocks.
2. The two-stage nested design. Suppose that we have s sires, d dams per sire,
and n offspring per dam. Take three factors A, B, and C so that y ijk , the observation on the kth offspring from the jth dam by the ith sire, becomes the observation at the i th level of A, the j th level of B, and the kth level of C. The sums of
squares appearing in the analysis table are then:
Between sires SA
Between dams in sires SAB + SB
Between offspring in the
same litter Sc + SAC + SBC + SABC.
The idea involved here is that assuming a sires and b dams per sire, there are
a(b - 1) d.f. for dams in sires. We write this in terms of (a - 1) and (b - 1)
as a(b - 1) = ab - a = (a - 1)(b - 1) + (b - 1). Hence, SB(A) = SAB + SB .
3. The example with methods, batches, and temperatures. We add a fourth
factor, D, for pretended replications and then present the data to the computer
as a four-factor experiment in A, B, C, and D. We have SB(A) = SB + SAB ,
SBC(A) = SABC + SBC and Se = SD + SAD + SBD + SCD + SABD + SACD + SBCD
+ SABCD-
Exercises
1. The following data are yields of dry herbage (cwt/acre) from an experiment on
grazed grass [Widdowson et al., (1966)]. There were three fertilizers, nitrogen at
three levels, phosphorus at two levels, and potassium at two levels. Yields are
given for four years, 1961-1964.
Years
1961
1962
1963
1964
NoPo Ko
N0 P1 K0
N0 P0 K1
N0P1 K1
N1 P0 K0
N,P 1 Ko
N,Po Ki
N1 P1 K1
N2Po Ko
N2 P1 Ko
N2 Po K1
N2P1 K1
56.6
77.5
63.3
65.5
82.9
116.8
99.4
111.7
78.7
100.0
102.6
123.8
46.7
50.8
46.8
61.8
79.0
85.4
80.0
84.3
73.3
84.6
74.8
95.2
62.4
65.6
65.4
78.5
89.8
104.4
88.0
106.2
78.2
98.8
100.4
100.7
69.1
70.8
87.8
88.7
100.6
107.8
105.8
118.7
98.6
109.4
106.0
119.5
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 5.
Group Ewe
Lactation Week
184
284
294
4
190
220
200
5
240
370
200
6
270
390
220
7
280
400
230
8
280
390
260
9
280
360
290
10
260
410
300
243
272
236
580
230
190
580
200
110
570
200
100
560
170
100
570
240
80
490
290
110
370
270
120
266
245
280
160
140
390
110
90
130
130
210
200
110
130
130
100
130
140
100
100
120
80
120
80
4 = 0,
QVT = 0 .
4. Aircraft are now used to sow seed and to spread fertilizer. Suppose that in a large
field we set up a grid pattern in the following way. Flying east and west, a plane
sows av strips, that is, a strips with each of v varieties. Flying north and south,
the pilot spreads fertilizer, b strips for each of t fertilizer treatments. The intersection of a sowing strip and a fertilizer strip is a plot. There are avbt of these, and n
observations are made from each of them. In both directions, the varieties or the
fertilizers are assigned to the strips at random. Set up the analysis of variance
table.
5. Lessman and Nyquist (1966) investigated the growth of an oil seed erop called
crambe. They tested eleven varieties in two locations, and in both locations
they made five replicates, each of which was divided into two blocks. In each
block four plants of each variety were sown. In one block the plants were
closely spaced; in the other they were widely spaced. There were thus 880
plants in all. Set up the analysis of variance table with the expectations of
mean squares regarding locations and plants as random, and regarding replicates, spacings, and varieties as fixed.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
Latin Square
Designs
[Ch. 6
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
ABCDE
BCDEA
CDEAB
DEABC
EABCD
ABCDE
CDEAB
EABCD
BCDEA
DEABC
ABCDE
DEABC
BCDEA
EABCD
CDEAB
ABCDE
EABCD
DEABC
CDEAB
BCDEA.
Suppose that we were to use the first of these squares and to let the rows denote
the cars, the columns the days, and the letters the gasolines. Then, on the
second day (column 2) the first car (row 1) uses gasoline B, the second car (row 2)
uses gasoline C, and so on. As we have written it, this square has a more systematic pattern than is needed or is desirable since for every car the gasolines follow
one another in alphabetical order. In practice, the experimenten should assign
the cars at random to the rows and the days at random to the columns (i.e., order
the columns by a random procedure).
6.1 Analysis
We assume a completely additive model; more will be said about this assumption later. Let Yifk denote the observation corresponding to the kth letter in the
ith row and the jth column, if there is one, i.e., to the observation on the kth
gasoline in the ith car on the jth day where 1 < i, j, k < p. The row, column,
and letter effects are denoted by pi , yf , and Tk , respectively, and for the present
we assume them to be fixed effects; is the grand mean and e1 ik is the random
error with the usual assumptions about homoscedasticity and normality. We then
have
Yiik
= 1 + Pi + '!
t
+ Tk
eilk
Analysis
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 6.1]
107
We shall denote the row, column, and letter totals by Ti.., T. 1 ., and T.. k , and the
corresponding means by y,.., y.,., Y..k; the grand mean will be denoted by y....
In addition to the side conditions 1, p t = 0 and 1f y, = 0, we impose the
condition I k Tk = 0 . The normai equations are then easily solved, and the least
squares estimates of the parameters are
^ = Y..., Pc = Y:.. Y..., Yr = Y. i . Y... 1 fk = Y.. k y....
The analysis of variance table follows. Under normality, the sums of squares
are distributed independently. The appropriate test statistics for the hypotheses
of no row effects, no column effects, or no letter effects are the ratios of the
corresponding mean squares to the mean square for error. Under the null
hypotheses, these ratios will each have the tentral F distribution with (p 1)
and (p 1)(p 2) degrees of freedom. If, for example, the row effects are
random variables with mean zero and variance 4, we use the same breakdown
into sums of squares. The expected value of the mean square for rows is then
a 2 + p4R.
TABLE 6.1
ANALYSIS OF VARIANCE
Source
SS
d.f.
EMS
Rows
1, I J I k Y4lk C
p - 1 1, T,. C
Columns
p -1 Ii T.J. C
p1
p 1
a2 + p 1, p?/(p 1 )
a2 + p Ii yf/(p 1)
Letters
Error
p-1 Ik T.?k C
By subtraction
p1
(p 1)(p 2)
oz + p Ik Tkl(p 1)
02
Total
p2 1
In the example of the gasoline experiment, the purpose of using the Latin
square design was to improve the precision of the gasoline comparisons by
eliminating the car and day effects. In agricultural experiments we could use
such designs to eliminate fertility trends in two perpendicular directions, eastwest as well as north-south; this was the context in which they were first introduced, and they are sometimes called designs for the elimination of two-way
heterogeneity. It is customary to refer to the three classifications as rows,
columns, and treatments. The requirement that there should be the same
number of rows and columns as there are treatments can present a difficulty, and
alternative designs which involve incomplete blocks can be used. That, however,
is a topic for later discussion.
The Latin square can also be used in factorial experiments. A complete
factorial experiment with three factors each at five levels, which we may call a
5 3 experiment, calls for 125 points. If we take one of the Latin squares we can
let the rows denote the levels of the first factor, the columns the levels of the
second factor, and the letters the levels of the third factor. Then we have a set of
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 6
twenty-five out of the 125 points with the property that for any two of the
factors each level of one appears exactly once at each level of the other. In the
general case we have a (l/p)th fraction of the complete factorial design. This
reduction in the number of points can be very attractive. When p = 5, it
represents an 80 per cent reduction in the number of observations that have to be
made. The additive model that we have assumed may be rewritten
Yi1k=
N+ai +Ni+Yk+etlk,
where Y, ;k is the observation, if any, made at the ith level of the first factor, the
jth level of the second factor, and the kth level of the third factor, and ai , PJ and
Yk are the corresponding main effects. The analysis follows the same lines, and
we have tests for the main effects of the factors. Contrasts may be tested by any
of the usual multiple comparison methods. The reduction in the number of
points obliges us to assume in our model that there are no interactions. This
restriction may be serious; it is discussed in the next section.
This type of fractional factorial design may become necessary because of
budget restrictions. It may also be necessary if time is one of the factors, as it is
for the dairy cattle and crop rotation experiments that we shall discuss later in
this chapter. Consider, for example, an experiment to investigate the consumption of lubricating oil in buses. Suppose that there are three brands of oil, X, Y,
and Z. We could take three groups of new buses (A, B, and C) and conduct a
test over three months (I, II, and III), in which case an observation would show
the average consumption of a test oil by a group of buses in a month. We might
have group A use oil X for the first month, followed by oil Y for the second
month, and oil Z for the third month. We cannot use two oils simultaneously in
the same bus and so, even though we might think of a factorial experiment in the
three factors (oils, groups, and months, each at three levels), we can observe only
one of the three points AIX, AI Y, and AIZ. We are obliged to use one-third
fractions of the three-factor design, and the use of one or more Latin squares
would be appropriate.
,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 6.2]
Let us consider, in particular, the gasoline that had been labeled treatment A.
We shall use subscripts 1, 2, 3, 4, and 5 for gasolines A, B, C, D, and E. We then
have
5
T.. 1 = 5
+ i=1
1 pi +j=1
yj + 5,r1 + (py)t>
4 j
5e.. 1
The terms 1 f yf and 1i pi vanish by virtue of the side conditions but the interaction terms that are actually involved are only a subset of the p 2 possible (py)
interactions, and there is no reason to expect them to vanish. They remain as an
unwanted and unknown nuisance. In this case the bias is
(py)11 + (PY)25 + (py)34 + (py)43 + (py)52
We might have chosen to label the gasoline in question treatment B rather than
treatment A, in which case the bias would have been
(PY)12 + (py)21 + (py)35 + (py)44 + (py)53,
or we might have retained the label A and used the second square, in which case
the bias would have been
(Py)11 + (PY)24 + (PY)32 + (py)45 + (py)53,
and so on. Thus, summing, or averaging, over all the labels and over all four
squares, it can be seen that the bias cancels out. In any particular square and for
any particular label there is a bias, but over the whole set it averages out. This
leads to the argument that the experimenter should choose his Latin square at
random from the set of all squares of side p and, having done so, assign the
letters at random to the treatments; by this procedure he would eliminate the
unwanted bias.
It is, alas, cold comfort to the experimenter, who has for his particular experiment one particular square, to know that if he could repeat his experiment
many times using randomly selected squares, the bias would on the average
disappear and to that extent, even in the presence of row-column interactions,
treatment differences would be estimable. He is saddled with the single square that
has been chosen, and his results are conditional upon the choice of that square.
Nor is the error term free from bias. Scheff (1959) shows that in the fixed
effects case the expectation of the mean square for error contains a term involving
the interactions, which is nonnegative and may or may not be appreciable.
The problem of bias in Latin squares was first noted by Neyman et al. (1935).
Wilk and Kempthorne (1957) consider a random effects model in a similar way.
In their model, rows, columns, and treatments are all considered as random
effects; they show that in this case, too, the mean squares for rows, columns,
treatments, and error are all biased if the simple additive model does not hold.
Kempthorne (1952) and Scheff (1959) discuss randomization models as alternatives to the models presented here.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 6
C8
Ce
Da ES
Ay
B8
Dfl Ey AS
Be
Ca
Ba
Cp
Dy
ES
Ae
De Ea
AP
On the fourth day of the test, driver a uses gasoline E in car 2, driver P uses
gasoline C in car 5, driver y uses gasoline A in car 3, driver 8 uses gasoline D in
car 1, and driver e uses gasoline B in car 4. The analysis with the additive model
follows the same procedure as the analysis of the Latin square design. There is an
additional sum of squares for Greek letters with (p 1) degrees of freedom and
there are only (p 1) (p 3) degrees of freedom for error.
Indeed, we could go further by having five different test courses and by having
each of the cars driven over a different course each day. Courses could be added
as a fifth factor by incorporating the third Latin square and using lower case
letters a, b, c, d, and e to denote the five courses. That would leave only (p 1)
x (p 4) = 4 degrees of freedom for error. A sixth factor, perhaps predetermined average driving speeds, could be added by incorporating the fourth
square and using Arabic numerals to denote the levels. There would then be no
degrees of freedom left for error, and, without some prior estimate of the
variance, testing hypotheses would present some difliculties. However, there is a
chance that perhaps one or two of the main effects might stand out much larger
than the others, which would point out the way to further experimentation. It
may be observed that if the experiment is going to need five cars, each on all-day
trips, we are certainly going to need at least five drivers. It does not, however,
follow that we are obliged to add drivers as a fourth factor and to use a GraecoLatin square. It depends upon the nature of the interest in the cars and drivers.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 6.4]
If we wish to investigate whether there are car differences and whether there are
driver differences, then we must add drivers as a fourth factor and, unless we are
prepared to increase the size of the experiment, the Graeco-Latin square would
be appropriate, with only eight degrees of freedom for error. However, if we are
interested only in comparing gasolines, and thus regard car and driver differences, if any, as nuisances to be eliminated, we should be better advised to use
the same driver with the same car throughout the experiment. Then the driver
effects and the car effects would both be absorbed in the row effects, which
would now denote car-driver combinations, and we should have twelve degrees
of freedom for error.
The Graeco-Latin squares and the hyper-Graeco-Latin squares are, like the
Latin squares, fractional factorial designs. The Graeco-Latin square is a (1/p 2)
fraction of the p 4 design, i.e., the factorial with four factors, each at p levels.
The square with no degrees of freedom left for error is a (1 /p' -1 ) fraction of the
pP+l
factorial. Such a fraction, in which every degree of freedom is used for
estimation, is said to be a saturated fraction.
This ability to add extra factors without increasing the size of the experiment
appears attractive on the surface, but the experimenter should note that not
only does the number of degrees of freedom for error diminish as more factors
are added, but also the problems with nonadditivity, which are so bothersome
in the Latin square layout, become even more troublesome. Graeco-Latin
squares exist whenever p is a prime, or a power of a prime, and for some other
values. Complete sets of p 1 mutually orthogonal squares for p = 3, 4, 5, 7, 8,
and 9 are given in the Fisher and Yates tables.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 6
1
x
l+x
0
l+ x x
1
1+x 0
1+x x
1
0
ABCD
ABCD
BADC
CDAB
DCBA
CDAB
DCBA
BADC
DCBA
BADC
CDAB
The first row of each square is the same. The second row of the second square
is the same as the third row of the first square. The third row of the second square
is the fourth row of the first square. The last row of the second square is the
second row of the first square. The third square is obtained from the second
square in the same way.
We now show that Bose's method is valid in the general case. We define the ith
square of the set to be the square that has gi = x i -1 as the first element of the
second row. The first element of the (m + 1)th row is gi .xm -1 = gi gm . We write
the ith square, therefore, as
0
...
gi
g+1
... gi + gP -1
gig2
gig2
gigP-1
gigP-1
+1
+1
gP-1
+ gP-1
...
gig2
...
gigp-1 + gP-1
Suppose that it is not a Latin square and that two of the elements that
appear in the (q + 1)th row are identical, i.e., for some pair t, u, (t # u), gi gq +
gt = gig, + g,. This implies gi = g, which is false because the elements of the
field are distinct.
PROOF.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 6.4]
PROOF.
Subtracting, we have (g{ gj)g q = (g{ g f)g,. This would imply that either
g = g. or g Q = g, in contradiction. E
This method was also presented by Stevens (1939). In his paper, Stevens
points out that the orthogonal set for p = 9 given by Yates in the 1948 edition
of the Fisher and Yates tables is not isomorphic to the set that Stevens himself
obtained using Galois fields, i.e., the one set cannot be obtained from the other
by a reassignment of the letters to the treatments.
It is easily verified that if p is a prime, rather than sn where n > 1, it is not
necessary to find a primitive element of GF(p) in order to obtain an initial
square. Bose points out that we can, instead, work with the residue classes
(mod p) and write the rows of the initial square in any order we wish.
{
01234
12340
23401
34012
40123
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 6
47
11
80
96
69
74
08
25
32
53
18
57
22
81
90
09
75
36
43
64
76
28
67
33
82
91
19
40
54
05
29
70
38
07
44
83
92
51
65
16
93
39
71
48
17
55
84
62
06
20
85
94
49
72
58
27
66
03
10
31
34
45
56
60
01
12
23
77
89
98
61
02
13
24
35
46
50
88
97
79
52
63
04
15
26
30
41
99
78
87
where 7rh is the effect of the hth square and (1r r) hk represents the interaction
between squares and treatments; P, (h) and yi(h) are the row and column effects in
the hth square. The side conditions on the parameters are h 7rh = 0 , -y^ P((h) = 0
for each h, Ii y f(h) = 0 for each h, I k rk = 0 , (ITT) hk = 0 for each h, and
lh (1TT)hk = 0 for each k.
With these side conditions, the estimates of the parameters are
^L = Y....,
fk = Y...k Y....,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 6.6]
The analysis of variance table is
TABLE 6.2
ANALYSIS OF VARIANCE
SS
Source
Total
Squares
Treatments
TxS
Rows in squares
Columns in squares
Residual
d.f.
spa 1
lh Gt G1 Gk Yhjk C
lh
T,a.../p 2 C = Ss
C = St
>hIkThk /pC S8 S,
Tnt.. /p l h Th ../pa
lh 2 1 T,? f .lP I h T.../p 2
By subtraction
Ik T.?. k /(SP)
s 1
p1
(s-1)(p-1)
s(p 1)
s(p 1)
s(p l)(p 2)
Pt
y1
k + etik,
Source
Total
Rows
Columns
Treatments
Residual
SS
21211k ytlk C
1, T./(sp) C
T. f /p C
Ik T.? k /(sp) C
By subtraction
d.f.
sp e
p1
sp 1
p1
(sp 2)(p 1)
EMS
+ sp I, pi l(p 1)
+ p 1, y2 /(sp 1)
02 + sp Ik Tk/(p 1)
a2
02
02
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 6
blocks of three cows each, and a Latin square design was used for each block.
The response recorded was the yield of milk in pounds for each five-week
period. The analysis will be developed further in the next section.
We take for our model an adaptation of the previous model to include the
blocking, and we shall now use Latin letters rather than Greek letters to denote
the parameters, including the mean. (This is done merely for conveniente
and there is no deeper significance to the change.) We have
Yhtjk = M + ph + C{(p
bf + tk
ehiik,
where Yh{fk is the yield during the hth period of the ith cow in the jth block;
during that time the cow was receiving the kth treatment; Ph , c{(j) , b5 , and tk are
the period, cow, block, and treatment effects.
Period
1
2
3
Total of Cow
Total of Total of
Period
Block 2
Period
Block 1
A 768
B600
C411
1779
B 662
C 515
A 506
1683
C 731
A 680
B 525
1936
2161
1795
1442
5398
A 669
C 550
B 416
1635
Block 3
1
2
3
Total of Cow
Total of Cow
A 941
B 718
C 548
2207
B 794
C 603
A 613
2010
3625
2997
2365
8987
A 1105
C 712
B 453
2270
B 891
A 830
C 629
2350
C 779
A 718
B515
2012
2514
2039
1676
6229
A 933
C 658
B576
2167
B 724
A 649
C 496
1869
TABLE 6.4
Source
SS
d.f.
Total
Blocks
Cows in blocks
Periods
2,756,705
1,392,534
318,242
814,223
57,791
121,147
52,768
53
5
12
2
Treatments
Errors
1752
1421
1064
4237
C 859
B 617
A 597
2073
2855
2159
1679
6693
C 749
B594
A 612
1955
2406
1901
1684
5991
Block 6
ANALYSIS OF VARIANCE
PxB
C 624
B 462
A 426
1512
Block 4
Block 5
1
2
3
B 459
A 409
C 222
1090
10
2
22
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 6.7]
= m + dh + ti +
r1 + Ck9
ehi5k9,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 6
where dh , ti , ri , and C kq are the period, (direct) treatment, residual treatment, and
cow effects, respectively. The side conditions on the parameters are
1 di, =01
1 t1 = 0,
r1=0,
11Ck9=
0.
k q
G = sp 2ih,
Dh = spin + spJh ,
We now write {C} i for the quantity G I k Cki; {C} i is the sum of all the yields
on all the cows that experience the ith residual effect. We have
{C} i = sp(p 1)m p 5. cki si.
k
_ (p 2 p 1)T{ + pR{
+ 1 )(P 2) '
ti sp(p
ri
Ti + pRi .
s(P + 1 )(p 2)
) = m + dh + Ckq,
1: E(Yhiika) = m + dh + C kq + t i + r5 ,
^2 : E (Yhilk9 )
= m + dh + Ckq + ti,
: E(Yh15k4)
= m +
dh + Ck q + r!.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 6.7]
Let S denote the sum of squares for regression under the nth model including
the correction for the mean, G 2 /(sp 2 ). Then
So
Dhh /(sP) + Ga
S 1
Ckq
/P G 2 /(sp 2),
k q
Dn/(sp) +
Ckgekq
k q
and
S
l So = Tt it + Rt rt +
t
Ti lt
Tilt +
t
Ri 'i,
t
(CkgCkq Ckj
jp) + G 2 /N
k q
Ri r"i
r"t{C}tlp =
i
Ti fi
t
Rir"i
t
ii = Til(sP),
so that
S2 = So + Tt ft = So + T T, l (sp) = So + T{ 2 /(sp),
and the sum of squares for direct effects ignoring residual effects is
S2 S o
= : Ti 2 /(sp)
with (p 1) d.f., and the sum of squares for residual effects eliminating direct
effects (i.e., for residual effects over and above the sum for direct effects alone)
is
PS3 =
Dh/s +
h
k q
so that the sum of squares for residual effects ignoring direct effects is
S3 So
=
t
and the sum of squares for direct effects, eliminating residual effects is
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 6
Thus, to test the hypothesis that there are no residual effects we take the test
statistic F = (S, S2 )/ Me , which has under the null hypothesis the F[(p 1), ]
distribution. In the particular example that we have been considering, a term
for block x period interaction has been removed. In the general case there are
(p 1) d.f. each for periods, direct effects, and residual effects, and (sp 1)
d.f. between cows; this leaves = spe (s + 3)p + 3. If the sum of squares
for block x period interaction is allo taken out there is a further reduction of
(s 1)(p 1) d.f.
In the example the sum of squares listed for treatments is the sum of squares
for direct effects neglecting residual effects. To obtain the sum of squares for
residual effects eliminating direct effects we have, where D l = 15313,
T,
A
13713
B
12000
C 11822
37535
Ti
Rt
{C}i
3R
T + 3Ri
1201.33
511.67
689.67
7385
7036
7801
22222
25297
23956
25817
340.67
46.67
387.33
860.67
558.33
302.33
1 2 3 4
2 3 4 5
0 1 2 3
3 4 5 0
5 0 1 2
4 5 0 1
5
0
4
1
3
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 121
The first step in Williams' procedure is to find a suitable initial (first) column.
Then, each subsequent column is obtained from the previous column by adding
one to each entry and reducing mod p. The elements of the initial column in the
example are, in order, 0, 1, 5, 2, 4, and 3. The differences between adjacent pairs,
reduced mod 6, are 1, 4, 3, 2, and 5. Every number other than zero appears
exactly once, and it follows that as we take the several columns each treatment
will be preceded exactly once by each of the other treatments. Thus, treatment 3
will be preceded by treatment 2 in the column where 3 appears in the second
row because the differente between the second and first entries in any column is
1 = 3 - 2.
We leek, therefore, for the initial column a permutation of the elements
0, 1, .. ., p - 1 such that in the p - 1 differences between adjacent elements
each nonzero member, mod p, appears exactly once. When p is even, such an
arrangement is given by 0, 1, p - 1, 2, p - 2, 3, p - 3.....p/2.
This is not, however, a unique solution. If we multiply each element of the
initial column by an integer that is prime to p, and reduce mod p, we obtain
another initial column. In the example, multiplying by 5 gives the new column
0, 5, 1, 4, 2, and 3. Another initial column for p = 6 is 0, 2, 1, 4, 5, and 3.
Multiplying this by 5 gives 0, 4, 5, 2, 1, and 3.
EXAMPLE 2. p odd. When p is odd, the sum p(p - 1)/2 of the elements is
divisible by p, and if each difference is to occur once in a column beginning with
zero the last entry would also be zero, which is not satisfactory. We have, however, seen an example of a scheme for p = 3 with two Latin squares in which
half the differences appeared in one square and half in the other.
Williams makes use of two Latin squares of side p. One of the squares is
derived from an initial column in which each of the odd elements appears
twice as a differente. The other initial column gives each even difference twice.
To obtain the odd differences, we take the initial column 0, 1, p - 1, 2, p - 2, ... ,
(p - 1)/2, (p + 1)/2. For the even differences, we take the same initial column,
but we write it in reverse order.
Using this procedure we obtain for p = 5 the following design using ten
cows.
01234
34012
12340
23401
40123
40123
23401
12340
01234
34012
In a subsequent paper Williams (1950) goes on to consider designs balanced
with respect to the residual effects of the previous two treatments.
Exercises
1. Derive the following missing plot formula for the Latin square design; G', R', C',
and L' denote the sum of the (p 2 - 1) actual observations taken and (p - 1)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 6
actual observations occurring in the same row, column, and with the same letter as
the missing plot.
x=
Show that if the missing plot received the ith treatment and is replaced by a value
calculated by the previous formula then
V(Th T)=Qa
\P
+ (P 1)(p - 2)/
2. Youden and Hunter (1955) suggested modifying the Latin square design in the
following way to obtain an unbiased estimate of the error. They chose a square
in which each variety appeared exactly once on the diagonal and duplicated those
plots, thus obtaining an estimate of error between duplicates with p degrees of
freedom. Because the design is no longer orthogonal the analysis calls for testing
subhypotheses: rows, columns (after rows), and treatments (after columns and
rows). Derive the analysis.
3. Suppose that one entire row is omitted from a Latin square design and modify the
analysis accordingly.
4. For the data for the dairy cattle experiment, compute
(i) the sum of squares for residual effects ignoring direct effects, and
(ii) the sum of squares for direct effects eliminating the residual effects.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
Factors with
Two or
Three Levels;
Confounding
In the previous chapters we have developed the analysis of variance for the
general multifactorial experiment. We finished up with algorithms for obtaining
degrees of freedom, sums of squares, and expected mean squares for fixed,
mixed, or random models. The only blocking situation considered was that of
the randomized complete block, in which case the blocks appeared in the
algorithms as the levels of another (random) factor.
In this chapter we shall take another look at the factorial experiment. The
2n and 3' factorials will be introduced. We shall also consider blocking in the
case in which the blocks are not large enough to contain all the treatments, a
situation which we saw for the first time in the split-plot design where each whole
plot contained only one level of each of the main treatments. We shall assume
throughout that all the factors have fixed effects, that the block effects are
random effects with mean zero and variance aB, uncorrelated with each other
or with the error terms, and that there is no interaction between blocks and
treatments. We mean by the last statement that if y j denotes an observation on
the ith treatment in the jth block, and y denotes an observation on the hth
treatment in the same block, then, apart from random error, the difference
Yhj y ij remains the same for all values of j.
The reader will not fail to notice the enormous contribution made by Yates
to the development of the topics covered in this chapter. In particular, numerous
references will be found to his pioneer monograph, The Design and Analysis of
Factorial Experiments, which was published in 1937 as Technical Communication
35 by the Imperial Bureau of Soil Science, Harpenden, England.
123
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
+ Pi + ( aP)ti + etirc.
= a.
Then
4= ab+a+b+(1),
4= 2ab+2aabab(1)=ab+ab(1).
The corresponding sums of squares are C = G 2 /N, as usual, and SA = N& 2
where N is the total number of observations and we assume that each of the
treatment combinations is observed the same number of times. Similarly,
writing N = NZ = P1 and ( aN)11 = (a)22 = (aP)12 = ( aa)21 = (aN), we
P)
4()= abab+(1).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.1 ]
its high level and the value 1 when A is at its low level; similarly, x 2 = + 1
at high B and x2 = 1 at low B. The four treatment combinations are thus
(-1, 1), (+ 1, 1), (-1, + 1), and (+ 1, + 1). Since the coordinates are 1,
it is convenient to write ( ), (+ ), ( +), (+ +). We can now fit the
model
YiJ = Po + flixi + P2x2 + R12x1x2 + e1,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
811=abc+ab+ac+bc+a+b+c+(1),
8&=abc+ab+acbc+abc(1),
8 (a) = abc + ab ac bc a b + c + (1),
11(ajY)>k = 0,
4 j
^1, (aSY)tlk = 0
!
lead to
(aNY)22a =
("PY)221 =
(aaY)212 =
whence
8(afly)=abcbcacab+a+b+c(1).
Alternatively, we may write the model as
E(y) = Ro + Rlxl + 192x2 + 9 3x3 + P12x1x2
+ P13x1x3 + P23x2x3 + N123x1x2x3
There are several notations that can be used to denote the ABC contrasts and,
similarly, other contrasts. We shall use either {ABC} or {x 1 x2x3 }. We shall also
use {x 1 x 2x3 = + 1} and {x l x2x3 = 1} to denote the sums of the responses at
the points at which x 1 x 2x3 = +1 or 1, respectively. Then {ABC} = {x 1 x2 x3} _
{x1 x2 x3 = + 1} {x 1 x2x3 = 1}. Yates has denoted ABC by A.B.C..
The ABC contrast can be written (abc ac bc + c) (ab a b + (1)),
which is the difference between the AB contrast at high C and the AB contrast
at low C. It may also be considered as the difference between the AC contrasts at
the two levels of B, or the difference between the BC contrasts at the two levels
of A.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.2]
The variance of the estimate of any effect, either main effect or interaction, is
N -1 0 2 . Each point contributes with the same weight to the estimate of each
effect. In particular, so far as the estimation of a is concerned, we have lost
nothing in precision by adding B and C to the experiment because the variance
of P 1 in this experiment is the same as it would have been if we had not had the
factors B and C and had made instead only four runs at low A and four runs at
high A. Alternatively, we may take the point of view that the addition of the
extra factor C to the experiment also adds two more points at high A and at low
A, and two more at high B and low B for estimating A, B, and AB. This is an
example of what is sometimes referred to as the hidden replication property of
the factorial experiment.
We have in the 2 3 experiment four direct comparisons to estimate the main
effect of A, namely, a (1), ab b, ac c, and abc bc. We obtain a vivid
pictorial representation when the experimental points are portrayed as the
vertices of a cube with coordinates ( 1, 1, 1).
bc 24
abc 40
c 20
30
(1) 12
a 22
The four constituent A contrasts are 10, 12, 10, and 16. The overall A contrast
is the sum, 48, with an average of 12. At low B we have A contrasts 10 and 10;
at high B we have 12 and 16, giving an interaction contrast 28 20 = 8. At low
C the AB contrast is 12 10 = 2; at high C the AB contrast is 16 10 = 6;
the ABC contrast is 6 2 = 4.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
0 and positive
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.2]
order. For the 2 2 design with (1) = 12, a = 22, b = 18, ab = 30, we should
have
(1)
12 34 82 M
16
120 = 4ab
22 48 22 A
14
104
72 = 4b
18
10
14 B
22
12
88 = 4a
ab
30
12
2 AB 82
60
48 = 4(1)
It is easily shown that the sum of the entries in the (n + l)th column should
be 2' times the last entry in the data column, e.g., 82 + 22 + 14 + 2 = 4 x
30 = 120. Quenouille (1955) points out that this "check" does not assure that
the calculations are correct. Consider again a 2 2 design and replace the first and
third entries in the second column by any numbers x and y. The entries in the
third column will be ab + b + x, ab b + y, ab + b x, and ab b y.
No matter what values are given to x and y, the entries in the third column sum
to 4ab.
Quenouille (1953) suggests using the fact that the sum of the squares of the
entries in the (n + 1)th column is 2' times the sum of the squares of the data.
It is obvious that this check is vulnerable to errors of sign in the (n + 1)th
column. However, Rayner (1967) has shown that this "check" holds "true" in
spite of mistakes in sign at any stage of the algorithm. To illustrate this we return
to the 2 2 example and consider what happens if an error is made in the sign of
the last entry in the second column. We should then have
(1)
12
34
82
22
48
18
10
14
ab
30
12
22
(2)
b
ab
12
22
18
30
34 82 196 M
48 114 48 A
50 22 28 B
64 26
8 AB
20
10
14
ac
30
24
40
12
10
14
2
4
0
16
(1)
a
bc
abc
(3)
(5)
(4)
32 C
4802
288
98
8
128
AC
BC
ABC
0
2
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
W
30 84
X
52 112
Y
44 20
Z
70 28
X+W
82 196
XW
22 28
Z+Y
114 48
Z Y
26
8
X + W+Z+ Y 196 244
X W+Z Y 48 36
104
140
16
20
244 280
36
36 40
4
280
40
(1) 9,
a l 15,
a2
20,
bl
7,
a l b e 5,
a2 b 1
13,
b2
6,
a l b e 1,
a2 b 2
15.
TABLE 7.1
ANALYSIS OF VARIANCE
Total
8 d.f.
SA
SE
2
1
1
2
lin B
quad B
1
1
SAS
lin A
quad A
The interaction sum of squares is usually subdivided in one of two ways. The
first method involves the use of orthogonal Latin squares. As was pointed out in
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.3]
Q R P.
These two squares have an additional property. If the second square is superimposed on the first square, each letter in the first square will appear exactly
once with each letter in the second square. Such a pair of squares is said to be
orthogonal. If we denote the coordinates (levels) for A and B by x l and x2 ,
respectively, P occupies in the first square those places for which x l + x2 - 0
(mod 3), while for Q we have x l + x 2 = 1 (mod 3), and for R, x l + x2 = 2
(mod 3). The totals for the letters are P 23, Q 37, R 31. Any contrast between
the letter totals is orthogonal to any contrast in the A totals or in the B totals.
We can, therefore, calculate a sum of squares between the letters in square 1
with 2 d.f. as (23 2 + 37 2 + 3 1 2 )/3 920.1 = 32.9. Alternatively, we could take
two orthogonal contrasts in the totals such as P Q and P + Q 2R and add
their individual sums of squares to obtain (-14) 2 /6 + (-2) 2 /18 = 32.9. For
the second square, the letter totals are P 29, Q 34, R 28. Any contrast in these
totals is orthogonal to any of the previous contrasts, and we have another sum
of squares, also with 2 d.f.: (29 2 + 34 2 + 28 2 )/3 920.1 = 6.9. The sum of
the two components is 32.9 + 6.9 = 39.8 = SAB . Because their derivations
involve the sets of points defined by x l + x 2 - 0, 1, 2 (mod 3) and by
x l + 2x 2 = 0, 1, 2 (mod 3), respectively, they are sometimes called the sums of
squares for AB and AB 2 interactions respectively.
For the 3 3 design we may subdivide SAB , SAc , and SBC in the same way.
SABc with 8 d.f. can be divided into four constituent sums of squares, each with 2
d.f., by breaking up the twenty-seven points into three sets of nine points each in
four orthogonal ways. We then have
+ x3 - 0, 1, 2 (mod 3),
+ 2x 2 + x3 =_ 0, 1, 2 (mod 3),
+ x2 + 2x3 = 0, 1, 2 (mod 3),
+ 2x 2 + 2x3 = 0, 1, 2 (mod 3).
ABC: x l + x 2
AB 2 C: x l
ABC 2 : x l
AB 2 C 2 : x l
Yates calls the sums of squares for AB and AB 2 in the 3 2 design the sums of
squares for the J diagonals and the I diagonals, respectively. He calls the
classifications that we have used for the 3 3 design Z, X, Y, and W, respectively.
The second approach is to split up the sum SAB into single degrees of freedom
for lin A lin B, and so on. We should then have the following four component
sums of squares: lin A lin B 1.0; lin A quad B 5.3; quad A lin B 33.3; quad A
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
quad B 0.1. There is no connection between these sums of squares and the sums
AB and AB 2 . The four components that we have just derived can also be obtained
by fitting the model
Yti = Yo + Yioui + Y2ou2 + Yoivi + Y02v2 + Y 11 u 1 v 1 + Y 12 U 1 V 2
+ Y21U2V1 + Y22U2V2 + ejj,
44
91
al
15
20
25
22
26
28
lin A
quad A
7
5
11
a l be
a2b1
13
22
2
20
1
10
19
16
8
2
54
41
50
145
163
85
32
46
163
a2
bl
b2
a2b2
1
15
S1
22
S2
S3
X
Y
21
48
91
145
aj b2
lin B
lin A lin B
quad A lin B
quad B
lin A quad B
quad A quad B
7.4 Confounding
When we first discussed blocking we considered only the situation in which the
blocks were complete, which meant that each block contained as many points or
Confounding 133
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.4]
P2X2 + P12X1X2
+ sg + eij,
where Y ijg is the response at the ith level of A and the jth level of B in the gth
block, and 8 g is the gth block effect, which we now treat as fixed. The usual side
condition l g S g = 0 becomes 8 + 6 2 = 0, and so we write 8 1 = 6 and
S2=+ 8.
Consider blocking scheme (i). The experimental points in block I are both at
low B. The experimental points in block II are both at high B. Hence, the
expectation of the B contrast is (using the suffix 1 to denote the low level of a
factor and 2 for the high level)
E{B}
= E(y22 +
Y12
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
A, B, and C singly in turn). With this blocking the expected value of the contrast
between block totals is
E{abc + ab + ac + bc a b c (1)}
= 88 + 441+ 4P2 + 453
4123.
The expectation of the A contrast is 8P 1 + 48. All three main effects and the
three-factor interaction are confounded with blocks.
We can, however, arrange the blocking so that one and only one of the
effects is confounded. This we achieve by taking any one of the leven contrasts
for estimating effects, and placing in one block all the treatment combinations
that appear with a positive sign in the contrast and in the other block those
treatment combinations that have a negative sign. The chosen contrast will then
be identical with the difference between block totals, and the chosen effect will be
completely confounded with block effects. However, the estimating contrasts are
mutually orthogonal, and so the other contrasts are orthogonal to the contrast in
the block totals; the other effects are clear of the block biases.
If we decided to confound ABC with blocks, the division would be
block I abc, a, b, c;
We note that in each block there are exactly two points at the high level of A
and two at the low level; the same is true for B and C. Block I consists of all the
treatment combinations with positive signs in the ABC contrast; we shall call
them the set of points defined by I = +ABC. They are also the set of points for
which x 1 x 2 x 3 = + 1. The other block contains the set of points defined by
I = ABC or by x 1 x 2 x 3 = 1. In general, let P be any effect. We shall call the
set of points that have positive (or negative) signs in the P contrast the set (or
fraction of the 2n points) defined by 1 = +P (or by I = P).
The chosen contrast is said to be the defining contrast of the confounding
scheme. The analysis proceeds as before, using Yates' algorithm, except that the
sum of squares for the defining contrast is discarded, since it is biased by the
block effects. The extension to blocking the general 2n design into two blocks of
2n -1 points each is obvious. When there are more than two blocks the situation
is more interesting; this will be discussed later.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.5]
replicates we might elect to confound ABC in the first replicate, AB in the second
replicate, AC in the third, and BC in the fourth. In that case the four interactions
are said to be partially confounded with blocks. Each of them is completely
confounded with blocks in one of the replicates, but it is unconfounded in the
other three replicates. We thus lose 25 per cent of the information about each of
the interactions by dividing the thirty-two observations into eight blocks of four
points each.
The experimenter has, therefore, two choices. He can either elect to learn
nothing about the three-factor interaction while at the same time retaining 100
per cent information about each of the two-factor interactions, or he can obtain
estimates of all four interactions at the colt of an increase in variance for the
estimates of AB, AC, and BC. This is a choice which he himself must make in
designing his experiment.
AN EXAMPLE OF PARTIAL CONFOUNDING. The following example,
given by Yates (1937), deals with an experiment on potatoes. The factors are
A, sulphate of ammonia; B, sulphate of potash; and C, nitrogen (manure). The
responses are the yields in pounds per plot.
ac 373
bc 398
ab 291
1163
la
c 312
a
106
265
b
abc 450
1133
Ib
(1) 106
ab 306
c
324
abc 449
1185
IIa
b 272
a
89
bc 407
ac 338
1106
IIb
(1)
(1) 131
(1) 101
87
ac 324
b 279
abc 471
1161
IIIa
323
128
a
bc 423
ab 334
1208
IIIb
a
103
bc 445
abc 437
1116
IVa
324
ac 361
b 302
ab 272
1259
IVb
Using Yates' algorithm for each of the four replicates separately, we obtain the
following totals and contrasts. The entries in the last column are the row totals.
The underlined contrasts are those that are confounded with blocks, and they
are not included in the corresponding row totals.
The estimates of the unconfounded effects are obtained by dividing the
corresponding totals by 32; for the partially confounded interactions the
divisor is 24. In Table 7.2 the rums of squares for the effects are obtained by
squaring the row totals and dividing by 32 or 24, as appropriate, the divisor
being the number of observations that went into the total.
The results of applying Yates' algorithm to the replicates follow.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
II
III
IV
B
AB
2296
144
512
12
2291
73
577
79
2369
145
645
61
2375
29
537
47
9331
333
2271
26
C
AC
770
82
745
39
713
47
759
87
2987
208
BC
186
30
189
23
151
33
143
43
526
33.
M
A
ABC
TABLE
Total
7.2
ANALYSIS OF VARIANCE
Source
Total
Blocks
Main effects
Interactions
Error
d.f.
SS
ry2
C
= 466779.7
(11632 + 1133 2 +) C
= 4499.0
= 443453.1
(333 2 + 2271 2 + 2987 2 )/32
(26 2 + 208 2 + 526 2 + 33 2)/24 = 13404.4
5423.2
31
7
3
4
17
k Points
MS
642.7
147817.7
3351.1
319.0
Each
Consider the set of all effects with the addition of a unit element I. They are
I, A, B, ..., AB, ..., ABC, and, with the condition A 2 = B 2 = = I, they
form a multiplicative Abelian group of order 211. The product of the effects
ABC, ABD is A 2 B 2 CD, or CD. The product CD is said to be the generalized
interaction of ABC and ABD. We note that we could also have said (x 1 x 2 x3 )
x (x1x2x4) = 4xx3x4 = x3x4 (since xi = x = 1 at each experimental point).
A similar group is formed by the treatment combinations with (1) as the
identity and a 2 = b 2 = c 2 = = ( 1). Here, multiplication by a corresponds to
multiplying by x l or to changing the level of factor A. The reduction of the 2 11
experiment to an experiment on the vertices of a hypercube with coordinates 1,
and the corresponding equivalence of A 2 = I and xi = 1, appears to be due to
Box. The group property for the sets of effects and of treatment combinations is
due to Fisher (1942).
Suppose now that we elect to divide a 2n experiment into four blocks, confounding ABC and ABD. We can place in the first block all points with
x1x2x3 = + 1 and x 1 x2 x 4 = + 1, and in the second block all the points with
x1x2x3 = + 1 and x1x2x4 = 1, and so on. But whenever we have x1x2x3 =
x1x2x4 = + 1, we also have x 3x4 = + 1. The division into blocks is thus
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.7]
+1
1
1
+1
+1
+1
1
+1
1
1
1
+1
Each of the blocks contains 2n -2 points. The contrast in the block totals
I + II III IV is the ABC contrast; l II + III IV is the ABD contrast.
The third degree of freedom between blocks corresponds to I II III + IV,
which is the CD contrast. No other effects are confounded.
In the general case, let P and Q be two effects. We may divide the 2n design
into four blocks, each of size 2n 2 , by assigning to block I all points which have
positive signs in both the P and Q contrasts; block II contains the points which
have positive signs in the P contrast and negative signs in the Q contrast, and so
on. Then the generalized interaction PQ will also be confounded with blocks,
and these will be the only three effects confounded.
If we wish to make eight blocks of size 2i -3 , we may take a third effect R
(other than PQ). One block will contain all the 2' points that have positive
signs in the P, Q, and R contrasts. The Beven effects confounded will be P, Q,
PQ, R, PR, QR, and PQR. In the general case of 2" blocks, we take for the
defining contrasts a set of k independent generators P, Q, R, S,. , by which
we mean k effects such that no one of them is the generalized interaction of any
set of the others. The blocks are then the 2k sets obtained by taking the interThe
sections of the sets defined by I = P, I = Q, I = R, I = S,
complete set of confounded effects consists of the generators and all possible
generalized interactions that can be derived from them.
If we add I we obtain a set that includes the identity and is closed under the
group operation. The set of defining contrasts together with I is thus a subgroup of the group of effects. This subgroup is called the defining contrast
subgroup. It is usually desirable to choose the defining contrasts, if possible, so
that only higher order interactions are confounded. For example, in dividing a 2 5
experiment into four blocks of eight runs each, we might consider confounding
the five-factor interaction and one of the four-factor interactions. However,
confounding ABCDE and ABCD would be unwise because we should then
automatically confound their generalized interaction, which is the main effect E.
Similarly, choosing ABCDE and ABC as defining contrasts also confounds the
two-factor interaction DE. A preferable choice of defining contrasts would be
two three-factor interactions and one four-factor interaction such as ABD, ACE,
and BCDE. When the block effects are random, the design in which there are
one or more main effects confounded is similar to a split-plot design.
-
..
....
[Ch. 7
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Block II
d
ae
b
abde
cde
ac
bce
abcd
Block III
e
ad
bde
ab
c
acde
bcd
abce
X 4 = X 1 X 2 +X 1 X2 X1X2
X5 = - X1X3 -X1X3
+X1X3
Block IV
de
a
be
abd
cd
ace
bc
abcde
+X1X2,
+XJX3
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.81
The second block is derived by multiplying each member of the principal block
by d, the third by multiplying by e, and the fourth by multiplying by de.
We could also approach the problem of allocation of points in the following
way. The principal block consists of the points for which x 1 x 2 x 4 = 1 and
x,x 3x 5 = 1. Multiplying these equations by x4 and x5 , respectively, and noting
that 4 = 4 = 1, we have x 4 = x 1 x 2 , x 5 = x 1 x3 . We can thus obtain the
principal block by writing down a basic 2 3 design in the factors A, B, and C, and
then adding the other two factors D and E by putting x 4 = x l x2 and x 5 =
x l x3 . Similarly, the second block could be obtained by letting x 4 = + x 1 x2 and
x5 = x 1 x3 .
number of letters that appears only in the ith and jth generators; and so on.
The sum of these parameters is t = n. We shall let w(i) denote the length of the
ith generator and w(i, j) the length of the product of the ith and jth generators.
Then
w(1)= t1+112 +...+tras +...,
w(1, 2) = w(1) + w(2) 2(t 12 + t123 + - - ).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
In general let E O(s) t denote the sum of all the t which contain in their subscripts an odd number of members from a set S of integers i 1 , i2 ,..., 1 < i < k.
Then, if w(S) denotes the length of the generalized interaction of the i l th, i2 th, .. .
generators we have
w(S) = 1 t.
0(S)
1w
2 = 2k - 2(1 t2
+ n2 ^
and showed that properties (i) and (ii) were not sufficient for the existence of a
confounding scheme.
Their example involved trying to block a 2 9 design into 2 4 blocks, using seven
words of length 4, six words of length 5, and two words of length 7. We have
w = 72 and so property (i) is satisfied. There is no difficulty in finding a set of
seven four-letter words satisfying property (ii); ABCD, ABEF, and ADFG
generate such a set.
We note next that 1 w 2 = 360 so that t 2 = t = n = 9. It follows that
nine of the t must be unity and the others zero. If such a scheme existed we could
take as generators the two seven-letter words and two of the five-letter words.
We should then have
w(1) + w(2) + w(3) + w(4) = 24.
But
1 W(i) =
4 t1234 + 3 1
tht7
+ 2 1 t{f + 1 t{.
A total of twenty-four can be obtained only if t1234, all the th1j , and all but two of
the t;5 are unity.
We can now try to reconstruct a set of generators with these values of t. One
letter, say A, must be in all four words; another letter, say B, must be in the
first three words but not the fourth, and so on. There are only two cases to be
considered: t12 = t34 = 0 and t12 = t13 = 0. In the first case each of the
generators must have six letters; in the second case w(2) = w(3) = 6. Thus an
arrangement with w(1) = w(2) = 7 and w(3) = w(4) = 5 is impossible. Burton
and Connor demonstrated the nonexistence differently, using some other results
from their paper.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.9]
such a way that each treatment or treatment combination appears exactly once in
each row and in each column. In consequence, the treatment differences are not
confounded with either the row or the column effects. Yates (1937) introduced
the term quasi-Latin square to denote a design in which more than p treatment
combinations are used in a p x p square array. There is double confounding.
One set of effects is confounded with rows and another set is confounded with
columns.
In a 4 x 4 square we may have one complete replication of a 2 design or two
replicates of a 2 3 factorial. In dividing a 2 4 design into four blocks of four runs
each, we may confound the four-factor interaction and two of the two-factor
interactions, or else two of the three-factor interactions and their product, which
would be a two-factor interaction. A design in which ABCD, AB, and CD
are confounded with columns, and ABC, ACD, and BD are confounded with
rows is
ABC
abc c
(1) ab abc c
a
bc ac (1) ab
AB
BC
AC
BC
ac bc
or
AC
abc c
(1) ab ac bc
abc c
(1) ab
bc ac b
In either case the first two rows and the last two rows are separate replicates.
The first two columns and the last two columns also constitute replicates. If,
however, the rows and columns are randomized, the design will not in practice
have this nice pattern with runs in the same replicate being in adjacent rows and
columns. The analysis is similar to that in the example of partial confounding
given earlier. Each of the partially confounded effects (the four interactions) is
estimated from the two rows (or columns) in which it is not confounded.
Yates gives a design for 2 6 in an 8 x 8 square confounding ACE, ADF, BDE,
BCF, ABCD, ABEF, and CDEF between the rows and ABF, ADE, BCD, CEF,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
ABCE, ACDF, and BDEFbetween the columns. A problem with this design was
noted by Yates (1948) and was discussed in detail by Grundy and Healy (1950).
The difficulty lies in the fact that, when the columns and rows are randomized,
there is a considerable probability of obtaining an arrangement in which the
contrast for one of the main effects turns out to be the contrast between diagonally opposite quarters of the design. This is illustrated in the arrangement that
we wrote down for the 2 4 factorial in the 4 x 4 square; the ABD contrast pits
the four points in the top left quadrant and the four in the bottom right quadrant
against the points in the other two quadrants.
Yates presents other designs involving the use of several squares. He also
gives quasi-Latin squares for 3n designs and for two replicates of a design with
two factors at three levels and one at two levels in a 6 x 6 square. He discusses the
use of quasi-Latin squares in split-plot designs, choosing his terminology from
the weaving of tartans. A design in which main effects are confounded with both
rows and columns is called a plaid square. If main effects are confounded in only
one direction, we have a half-plaid square.
An example of a half-plaid square for a 2 3 factorial repeated twice, with A
confounded with rows and BC and ABC confounded with columns is
BC
ABC
abc ac
a ab
(1) b
a ab
abc ac
bc c
bc
(1).
ab
ac
bc
abc
ab b
(1) abc bc
ac
ac
abc bc
(1)
ab
bc
abc c
ab
(1) a
ac
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 7.10]
In the second design there are two replicates of a 2 4 factorial. Rows 1 and 2,
and rows 3 and 4 each comprise a complete replicate of the 2 4 . The first four
columns are a complete replicate confounding AB, ACD, and BCD. In the last
four columns, CD, ABC, and ABD are confounded.
(1) bd ac abcd ab ad bc cd
abc a
bcd d
cd bc ad ab
abd acd b
acd c
abd b
(1) bd ac abcd
bcd abc d
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
00 Oy 01
ly
10
Ox
lx 11
xl xx xO xy
yx yl
yy y0.
(ii) We may replace each four-level factor by two pseudofactors, each at two
levels, A by P and Q, B by R and S. Let the coordinate one denote a
pseudofactor at its high level and zero denote it at its low level. The
points are
0000
1000 0100
1100
0010
1010 0110
1101
0001
1001
0101
1110
0011
1011
0111
1111
This really amounts to replacing 0, 1, x, and y in the previous representation by 00, 10, 01, and 11, respectively.
The three degrees of freedom for A correspond to the main effects P and Q
and the interaction PQ. The main effects of B are R, S, and RS. The other nine
interactions between the pseudofactors correspond to the interaction AB. We
can now elect to split the 2 design into four blocks confounding PQR, QRS, and
PS. This method will give the same blocks as the previous method.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 7
Exercises
1. Apply Yates' algorithm to the following set of data for a 2 4 experiment:
(1)
a
b
ab
3.96
4.05
2.71
2.94
c
ac
bc
abc
3.71
3.87
2.67
3.02
d
ad
bd
abd
4.53
4.69
3.01
3.37
cd
acd
bcd
abcd
4.52
4.72
3.32
3.53
2. Use the algorithm to evaluate the contrasts and obtain the analysis of variance
table for the 3 3 design given as an example in Chapter 5.
3. Devise an algorithm in the style of Yates for calculating the contrasts in a
2 2 x 3 design. Use it to carry out the analysis of variance for the following
design which has two levels of P, two levels of N, and three levels of K.
Ko
No N1
K1
No N1
KZ
No N1
Po
23 36 25 46 25 31
P1
34 28 19 54 19 38
4. The data in exercise 1 were actually taken from a 2 2 x 4 experiment [Raese and
Decker (1966)]. Factors C and D correspond to the factor with four levels. Use
the results of exercise 1 to obtain the analysis of variance table for the 2 2 x 4
design.
5. In the section on partial confounding we considered the example of a 2 3 design
with four replicates, each divided into two blocks of four points each. Prove that
the estimates we obtained are actually the least squares estimates.
6. Prove the necessity of the four conditions on the words in the defining contrast
subgroup given at the beginning of the section on the composition of that group.
7. Find the principal block when the 2 8 design is split into blocks of sixteen runs
each, using the defining contrast subgroup generated by ABCD, ABEF, ABGH,
ACEG.
8. Derive the quasifactorial design for a 2 6 design in an 8 x 8 square by Yates,
which was mentioned in the text.
9. Derive a design for a 2 5 factorial in a 4 x 8 rectangle, confounding ABC, ADE,
BCDE with rows and AC, DE, ABD with columns.
10. Obtain the partially confounded design for a 3 3 factorial with four replicates,
each in three blocks of nine points each. Confound ABC with blocks in the first
replicate, ABC 2 in the second, AB 2 C in the third, and AB 2 C 2 in the fourth.
11. A reasonable procedure when a plot is missing in a 2n design is to replace it by
a value which makes the highest order interaction zero. Apply this technique to
the data of exercise 1, assuming bc to be missing. What is the variance of the
estimate of an effect when a missing plot is included?
12. (Continuation). In the 2n design the highest order interaction has only one
contrast. However, in a 3" design the highest order interaction has 2n degrees
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 147
of freedom; thus, there are 2" orthogonal contrasts, each of which might be
equated to zero to calculate a missing value. A less ambiguous procedure
would be to omit all the highest order interaction terms from the model and use
the procedure of the earlier chapters. Investigate this for the 3 3 experiment of
exercise 2, assuming that the point 012 is missing.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
Fractions of
2n Factorial
Designs
I 2
2 I
or
2 1
1 2.
If we let rows represent the levels of A, columns the levels of B, and I and 2 the
levels of C, we have two four-point fractions of the 23 design: (1), be, ab, ae, and
b, e, a, abc. These are half replicates of the 23 design, or 23 - 1 designs, from which
the main effects A, B, and C are estimable, if we neglect their interactions. The
2n - " fractions, or 1{2" fractions of Z" designs were introduced by Finney (1945).
148
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.1 ]
149
They will be the topic of the first part of the chapter, after which some other
fractions will be discuseed.
Fractional factorials are commonly used in industrial experimentation where
runs are expensive and where an acceptable prior estimate of the variance is
available. They may also be used for screening experiments. These are experiments performed in the early stages of an investigation in which many factors
are considered, most of which may turn out to have little or no effect upon the
response under investigation. The purpose of the screening experiment is to
screen several factors with the purpose of spotting those factors, if any, that have
appreciable effects. The factors that seem to be interesting are then investigated
more closely in subsequent experiments. The emphasis is not so much upon
estimating the effects with small variance, but upon finding out which of the
factors merit further study. We shall assume throughout most of this chapter
that the experimenter is interested in estimating the main effects, and perhaps the
two-factor interactions; that he is prepared to assume before carrying out the
experiment that the higher order interactions are negligible; and that he is not
particularly concerned with using the actual experiment to provide himself with
an estimate of the variance. The emphasis will therefore be on finding small
experiments in which a high percentage of the degrees of freedom are used for
estimation. In these small experiments there will be few degrees of freedom for
error even if higher order interactions are used, and it will be assumed that the
experimenter has some prior estimate of the error variance. Daniel (1959) has
introduced a graphical method for deciding which effects in a 2n factorial are
significant when there is no estimate of error. If there is no prior estimate
available such graphical procedures seem to be the only recourse.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
senses and we shall refrain from employing it here. Some authors use it to
denote the fraction containing (1) by analogy with the term principal block.
Box and Hunter (1961) use it to denote the fraction for which the defining
contrasts all have positive signs; in our example that would be the fraction
containing de, a, be, abd, cd, ace, bc, and abcde. We now consider that fraction in
more detail.
For each treatment combination in the fraction the relationship 1 = x 1 x 2 x 4 =
x 1 x 3 x 5 = x 2 x3 x4 x5 holds. Multiplying by x 1 and recalling that xi = 1, we have
xl =
at each point so that A, BD, CE, and ABCDE are indistinguishable. The four
effects A, BD, CE, and ABCDE are said to constitute an alias set and to be
aliased (or confounded) with each other. The alias sets are the cosets of the
defining contrast subgroup (which is sometimes called the alias subgroup in
this context). There are 2n k alias sets (including the subgroup itself) and each
set has 2k members. Each effect is aliased with the effects in the same alias set
but with no others.
If the elements of the vector of effects F3 are written by order of alias sets so
that P' = (PO, P124, P1359 P2345, P13 P24, P35, P12345, ...) the cross-product matrix
X'X in the normai equations consists of square matrices 8J 4 along the main
diagonal and zeros elsewhere. The rank of X'X is 8. A matrix of full rank is
obtained by choosing one effect from each of the alias sets and striking out the
remaining rows and columns. If, therefore, we were to assume a restricted model
which included the mean, the five main effects, either BC or DE, and either CD
or BE, but no other terms, the corresponding least squares equations would have
a unique set of solutions.
The A contrast from this fraction is
-
B + AD + ABCE + CDE
C + ABCD + AE + BDE
BC + ACD + ABE + DE
A + BD + CE + ABCDE
AB + D + BCE + ACDE
AC + BCD + E + ABDE
ABC + CD + BE + ADE
For A to be estimated we must assume that BD, CE, and ABCDE are all zero.
If we plan to use this fraction with the intention of estimating A we must decide
a priori that we are going to ignore the other three interactions. The prior
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.2]
151
decision to ignore the five-factor interaction will cause little concern, but it may
not be reasonable to assume without further investigation that the two-factor
interactions BD and CE are negligible. If these two particular interactions are
the only ones that concern the experimenter, he can avoid the difficulty by
choosing a different fraction such as one of the 2 5 2 defined by I = ABC =
A DE = BCDE. The two interactions will then be aliased with each other,
but not with any of the main effects. There is not a quarter replicate from which
the mean, the five main effects, BD and CE can all be estimated. If, on the
other hand, the experimenter is not willing to declare prior to carrying out his
experiment that any of the two-factor interactions can be ignored, he cannot
estimate without bias the five main effects from any 2 5-2 fraction. In that case he
is going to have to perform a larger experiment or to omit one of the factors.
-
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
last two terminologies are in common use. The justification for Daniel's nomenclature becomes clear when the alias sets are considered. If one of the defining
contrasts is a three-letter word, say ABC, then A is aliased with BC, B with AC,
and C with AB; the three main effects are estimable only if the three 2 f.i. are
suppressed. With ABCD as a defining contrast, A is aliased with BCD, but AB
is aliased with CD. With a five-letter word ABCDE, the main effects and 2 f.i.
are all aliased only with higher order interactions.
We shall use the following definition of the resolution of a fractional factorial,
which is applicable to other fractions as well as the 2n ' series. An interaction
involving t factors will be called a tth order effect; main effects are first-order
effects. Let t be any integer.
A design is said to be of resolution (2t + 1) if it satisfies the condition that all
effects of order t or less are estimable whenever all effects of order higher than t
are suppressed.
A design is said to be of resolution 2t if all effects of order (t 1) or less are
estimable whenever all effects of order (t + 1) or higher are suppressed.
-
8.3 Some
2n - k Fractions
The 2 3 -1 Design
The smallest usable 2n - k fraction is the 2 3-1 consisting of four points. Two
such designs are useful: one, defined by I = ABC, contains the four points,
a, b, c, and abc; the other, defined by I = ABC, consists of (1), ab, ac, and bc.
Both these designs are three-letter plans. Each main effect is aliased with a
two-factor interaction. In the first of these half replicates the estimates of the
main effects are
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.4]
153
laboratories and pilot plants, especially when they are not quite sure at the
beginning of a series of experiments how far apart to take the levels of the
quantitative factors; if a ten-degree change of temperature is tried and does not
appear to produce an adequate change in response, perhaps the high and low
levels of the temperature factor should be twenty degrees apart. A useful compromise is to begin with the one-at-a-time experiment and then to add a fifth
point, abc. The five points then comprise the half replicate defined by I = + ABC
plus the base point (1). With the fifth point included in the experiment, one can
retain the same model with mean and main effects only, or else add to the model
a term for one of the interactions. It will be found that when (1) is added to the
half replicate and P123 is added to the model, the least squares estimates of the
main effects A, B, and C remain the same as the estimates from the half replicate
alone. On the other hand, if P 12 were the interaction added to the model, the
estimates of the mean, A and B, would be unchanged but that of C would be
altered.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
two half replicates. The fourth column of figures in each section is the column of
contrasts; these figures, which estimate 8fl, should be compared with one half of
the values of the contrasts for the complete design.
I = + ABCD
(1)
ad
bd
ab
cd
ac
bc
abcd
7
15
28
66
8
13
38 12 A
12
18 10
0 B
1
20 2 26 AB + CD
1 2
10 C
6
12 11
2
8 AC + BD
14
6 12
4 BC + AD
6 8 14 2 D
I = ABCD
d
a
abd
c
acd
bcd
abc
10
7
9
5
11
6
10
7
17
14
17
17
3
4
5
3
31
65
34 15 A
7 3 B
8
1 AB CD
3
3 C
0 1 ACBD
1
3 BC AD
2
3 D
The last contrast in each table is the ABC contrast. In the first fraction this
contrast estimates 8(ABC + D); suppressing ABC we have 8$ 4 = 2. In the
second half replicate the contrast estimates 8(ABC D), so that we have
8 4 = 3, or 8 4 = 3.
It should also be noted that adding the values of the contrasts in the two half
replicates gives the values for the complete design. Thus the A contrast for the
complete factorial is 27 = (-12) + (-15) ; the AB contrast is 26 + 1 =
25, and the CD contrast is 26 1 = 27. We are reminded in the second
half replicate that it is not wise to conclude, just because the estimate of AB
CD is 1, that both AB and CD are small. Although there is no mathematical
justification for it, some scientists would as a practical matter be prepared, as
Daniel (1962) has pointed out, to assume for example in the first half replicate
that, since the A and C effects are large and the B and D effects are small, the
relatively large size of the AC + BD contrast can be attributed to the AC
interaction rather'than the BD interaction. This procedure, lacking as it does a
firm mathematical basis, can lead to pitfalls unless the scientist has a considerable amount of prior information about the probable relationships between the
factors.
If we add to the first of these half replicates a fifth factor E by putting
x 5 = x 1 x 2 we have the 25-2 design defined by 1 = ABCD = ABE = CDE.
,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.5]
155
This resolution III design consists of the points e, ad, bd, abe, cde, ac, bc, abcde,
and is similar to the 2 5 - 2 designs that were mentioned earlier.
Adding F by putting x s = x 1 x 3 gives the 26-3 design defined by I = ABCD =
ABE = CDE = ACF = BDF = BCEF = ADEF, which consists of the points
ef, ad, bdf, abe, cde, acf, bc, abcdef.
Finally, we may add a seventh factor by letting x 7 = x 2 x 3 and obtain efg, adg,
bdf, abe, cde, acf, bcg, abcdefg. The defining contrast subgroup for this fraction
is generated by ABCD, ABE, ACF, and BCG. The alias chains for main effects
and 2 f.i. are
A+BE+CF+DG
B+AE+CG+DF
C+AF+BG+DE
D+AG+BF+CE
E+AB+CD+FG
F+AC+BD+EG
G+AD+BC+EF
A three-letter plan for 2t t -1 factors in 2n runs can always be constructed in this
way by starting with a basic 2n design and then adding new factors by equating
them to interactions.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
(1), ae, be, ab, ce, ac, bc, abce, de, ad, bd, abde, cd, acde, bcde, abcd.
The complementary half replicate, defined by I = + ABCDE, contains all
treatment combinations with an odd number of letters.
Four-letter plans for six, seven, or eight factors can be obtained by starting
with a basic 2 4 design and adding the other factors by putting E = ABC,
F = ABD, G = ACD, and H = BCD. The design for all eight factors consists
of the points
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.6]
Folding over can also be considered from the point of view of breaking chains
of aliases. Since the three-letter defining contrasts change signs in the second
fraction, the 2 f.i. change signs in those alias chains which include main effects.
Thus, in our example, the alias chain for A in the first eight points (considering
only main effects and 2 f.i.) is A + BE + CF + DG AH, while the corresponding alias chain in the second set is A BE CF DG + AH. The A
contrast from the first eight points gives an estimate of ft + P25 + P36 +
P47 P12. From the second eight points we have an estimate of fl p
P3s P47 + . Adding them gives an estimate of 22 1 .
Another possibility is to take a design of resolution III and repeat it, changing
only the level of A without adding the extra factor H. This gives a design in
which A and all the 2 f.i. which contain A are estimable, biased only by interactions involving three or more factors. In our example the design would be
efg, adg, bdf, abe, cde, acf, bcg, abcdefg,
aefg, dg, abdf, be, acde, cf, abcg, bcdefg.
The set of defining contrasts for the combined design consists of all the defining
contrasts of the original design which do not contain A. The alias chains
containing A are A + BE + CF + DG and A BE CF DG. The alias
chains containing AB are AB + E + FG + CD and AB E FG CD.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
bfhjkm
cegjlm
abdegk
acdfhl
aghjkl
abcefj
defklm
bcdghm
efgh
bckl
adjm
abcdefghjklm.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.8]
cdeg
acfg
bdfg
abeg
ef
ad
bc
abcdef
befg
abdg
cg
acdefg
bcde
abcf
df
ae
abcg
bcdefg
aefg
dg
abdf
be
acde
cf
abde bcdf
bf
abce
acdf
de
ce
af
abcefg bg
bcdg
abdefg
ag
cefg
defg
acdg
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
when, by the time the experiment has been completed, the information on how
the fraction was constructed has been lost. It has been discuseed by Nelder
(1963). The method of solving the problems presented in this section is due to
Margolin (1967).
We assume that we have already found by inspection a basic set of factors or
Ietters. Margolin gives a simple method of doing this and calls the letters in the
basic set live letters and the others dead. It will be helpful to consider an example.
Consider the eight-point fraction bc, acde, abdf, ef, ag, bdeg, cdfg, abcefg. E, F,
and G are a set of live letters. The first step is to find a defining contrast that
contains A and some of the live letters, but no other dead letters. We shall then
do the same for B, C, and D, and the four contrasts will be a set of generators for
the defining-contrast subgroup. These contrasts are called the special defining
contrasts for the dead letters. Margolin gives two rules.
To determine the sign of the special contrast for any dead letter in the defining
relationship of the fraction, we examine the treatment combination in which all
(n k) of the live factors are at their high levels. If, at this point, the particular
dead factor is also at its high level, then the special contrast for that factor has a
positive sign. If the factor is at its low level, the contrast has a negative sign. In
the example the special contrasts for A, B, and C have positive signs; that for D
has a negative sign.
We now find which live factors appear in the special contrast of the dead
factor being considered. We consider each live factor in turn and look at two
points, the point at which all the live factors are at their low levels, and the
point at which the particular live factor is at its high level and the others are at
their low levels. If the dead factor is at the same level in both points, then the live
factor does not appear in the special contrast; if the levels are different, the live
factor is present.
In the example we consider first the special contrast for A. We have already
established that it has a positive sign. The point at which E, F, and G are all
at their low levels is bc. In each of the points acde, abdf, ag, A is at its high
level and therefore all three letters, E, F, and G, appear in the special contrast
for A, which is thus AEFG. The other special contrasts are BEG, CFG, and
DEF.
We return now to the problem of the aliases. We have A = EFG, B = EG,
C = FG, and D = EF. We next write down the Beven sets of three effects in the
live 2 3 that have the identity for their generalized interaction: (E, F, EF D),
(E, G, EG = B), (E, FG = C, EFG = A), (F, FG, G), (F, EG, EFG), (G, EF,
EFG), (EF, EG, FG). When the interactions are expressed as dead factors, the
products give the set of three letter defining contrasts,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.9]
d, ab, c, abcd;
(ii)
I = AB = +ACD = BCD
(iii)
(iv)
I = AB = ACD = +BCD
and suppose that we omit the first of them. The remaining fractions form three
overlapping half replicates
(ii) + (iii) I = BCD,
We can estimate A from (ii) + (iii) sine there A is aliased with ABCD; A is
not, however, estimable from either of the other two half replicates. B is estimable from (iii) + (iv); C, D, and CD from (ii) + (iv); AC and AD from (ii) +
(iii); BC and BD from (iii) + (iv). We shall see later that these are the least
squares estimates. AB is estimable from both (ii) + (iii) and (iii) + (iv); the
least squares estimate is the average of these two estimates.
We recall the model
E(y) = Po + $i x= +
t
$1xx1 + .. .
s
that we presented before, and again consider the normal equations X'Y =
X'XO. The alias sets for the quarter replicates are I, AB, ACD, BCD; A, B, CD,
ABCD; C, ABC, AD, BD; and AC, BC, D, ABD. We write the elements of the
parameter vector f3 in that order: P = (9p, P12, $134, $234, Nl, N2, P349 $1234, )
'
The cross-product matrix, X'X, for the complete desigr. is 2 4I4 . The crossproduct matrix for the omitted fraction (i) consists of submatrices 4J 4 along the
main diagonal and zeros elsewhere. The cross-product matrix for the twelvepoint design is the differente between these two matrices and consists of submatrices 16I 4 4J 4 along the diagonal. Each of these submatrices is of rank 3.
When we suppress from the model the higher order interactions and strike out
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
the corresponding rows and columns of X'X, the first submatrix is reduced to
16I2 4J2 with inverse (2I 2 + J2 )/32 and the other three submatrices become
16I 3 4J 3 with inverses (I 3 + J 3 )/16.
The inverse of the cross-product matrix is the variance-covariance matrix of
the least squares estimates of the parameters. The estimate of A, for example,
has variance V(P 1 ) = (1 + 1)x 2 /16 = a 2 /8. This is the variance of the estimate
from the half replicate (ii) + (iii), and thus, since the least squares estimates are
the unique minimum variance estimates, the estimate from the half replicate is
indeed the least squares estimate of A. Similarly, the variance of the average of
the estimates of AB from the two intersetting half replicates (ii) + (iii) and
(iii) + (iv) is 3a 2 /32, which is the same as (2 + 1)a 2 /32, the variance of the least
squares estimate.
The calculations in the previous example were simplified because we chose
to omit the fraction for which the defining contrasts each had positive signs.
The general case is only slightly more complicated. Suppose that we have omitted
from a 2n factorial any 2n - k fraction. We can again write the elements of the
parameter vector in order of alias sets. Then the cross-product matrix for
the omitted fraction will consist of identical square submatrices 2n - k P along the
diagonal and zeros elsewhere. The elements of P may be positive or negative,
depending on the signs of the defining contrasts. They do, however, satisfy the
following three conditions:
R^ = P>i; p = 1 ; Ph>Pi> = Pni.
For any matrix P m of order m with elements satisfying these conditions it
follows that P, = mP m ; J m is a special case of the class of P matrices. This is
true in particular of the matrix obtained by striking out any (2k m) columns of
P and the corresponding rows.
Proceeding as before we see that the cross-product matrix for the actual
design consists of singular matrices 2nI 2n - kP along the main diagonal and
zeros elsewhere. If we can find at least one effect in each alias set that can be
suppressed, we can strike out that row and column and obtain a nonsingular
matrix. We can readily show that when aI m + bP m is not singular, its inverse is
cI m + dP m (Pm being the same in both matrices), where ac = 1 and d = bc/
(a + mb). In this instante we need the inverse of 2'I m 2n - kP m , which is
cI m + dP m where c = 2 - n and d = 2 - n(2k m) 1
We have now shown that if none of the effects in an alias set is suppressed,
none of them is estimable, but, if at least one effect is suppressed, the others are
estimable. Furthermore, if m of the effects in an alias set are to be estimated,
their least squares estimates will all have the same variance (c + d)a 2 or
.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.101
We now turn to the problem of finding estimates that have these variances.
If we can do so, they will be the unique least squares estimates, and the covariances will look after themselves. Now that we have established the variancecovariance matrix of the estimates, there will be no loss of generality if we
simplify matters by assuming that each of the defining contrasts in the omitted
fraction has a positive sign. Suppose that it is defined by I = P = Q =
PQ = . The actual design then consists of 2k 1 overlapping half replicates
defined by I = P, I = Q, I = PQ, and so on. Each pair of these half
replicates has a quarter in common: for example, the half replicates defined by
I = P and by I = Q both share the points for which I = P = Q = +PQ.
Let S be an effect that is to be estimated. In the half replicate defined by
I = P, S is aliased with PS, and if PS is suppressed, S can be estimated from
that half replicate. If 2" m of the effects in the same alias set as S are suppressed, S is estimable from 2k m overlapping half replicates. Each of these
estimates has variance 2 -( n -1) a 2 ; their covariance is 2 - no 2 . Let P denote the
average of these estimates. Then
-(n-1) + (
= 2 n(2k m + 1 )a 2 /( 2k m),
-
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
AB, AC, BC. Suppose that we let D = AB and E = BC. Then D and
E are estimated from the half replicates in which they are aliased with A C. If we
omit the quarter defined by I = AB = AC = +BC, the six points are
(1), abc, bde, acde, abe, ce.
A and D are estimated from the half replicate defined by I = BC. The A
contrast is abe + acde ce bde. The D contrast is acde + bde abe ce.
B and the general mean are estimated from the half replicate defined by I =
+AC. The B contrast is abc + bde (1) acde; 4P 0 = ( 1) + abc + bde +
acde. C and E are estimated from the half replicate defined by I = + AB. The C
contrast is abc + ce (1) abe; the E contrast is abe + ce (1) abc.
In general, any 3(2' -2 ) fraction can be made into a design of resolution III
for 3(2n -2 ) 1 factors. New factors are assigned to interactions in such a way
that three of the effects in each alias set correspond to main effects and one is
left over. Each main effect is then estimated from the half replicate in which it is
aliased with the suppressed effect that is left over. In this way we can convert the
3(2 4-2 ) fraction mentioned earlier into a design of resolution III for eleven
factors. We can let E = AB, F = ACD, G = CD, H = ABC, J = AD,
K = AC, M = BC with BCD, ABCD, BD, and ABD left over. The design would
then be
(ii)
(iii)
ad
acdf bdf
cde
abde.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.11 ]
165
It should be noted that this is a fold-over design and that it can be divided into
six blocks of two runs each without losing its resolution IV property. The blocks
are the columns of the array in which we have written the points.
This illustrates a general procedure for obtaining a resolution IV design for
3(2' 3 ) factors in 3(2 11 - 2 ) runs. We take a 3(2 11 - 2 ) fraction defined by omitting
a quarter replicate in which every defining contrast contains an even number of
letters. The alias sets then consist either of four effects each with an even
number of letters, or else of four effects each with an odd number of letters.
The new factors are added by equating them to odd interactions, leaving one
over in each alias set. The 2 f.i. will then all have an even number of letters, and
so they will not appear in the same alias sets as the main effects.
-
I-'
A
AB
AC
C
BC ABC
E
AE
BE ABE
CE ACE
BCE ABCE
AB
B
ABC
C
AC BC
E
ABE
AE BE
CE ABCE
ACE BCE
R= ACD
S= BCE
RS = ABDE
CDE
BCDE
DE
BDE
CE
BCE
E
BE
AB
A
C
ABC
BC AC
D
ABD
BD AD
CD ABCD
BCD ACD
BCDE
CDE
BDE
DE
BCE
CE
BE
E
ABCDE
ACDE
ABDE
ADE
ABCE
ACE
ABE
AE
ACD
CD
AD
D
ACDE
CDE
ADE
DE
ABCD
ACD
ABD
AD
ABCDE
ACDE
ABDE
ADE
BCD
CD
BD
D
BCDE
CDE
BDE
DE
R = ABE
S = ABCD
RS = CDE
A
AB
C
AC
BC ABC
AD
D
BD ABD
CD ACD
BCD ABCD
ABCD.E
ACDE
ABDE
ADE
ABCE
ACE
ABE
AE
BCD
ABCD
BD
ABD
BCDE
ABCDE
BDE
ABDE
A
B
AB
D
AD
BD
ABD
ACDE
CDE
ADE
DE
ACD
CD
AD
D
R = ACE
S= BCD
RS = ABDE
ADE
DE
ABDE
BDE
C
ABCD AE
BCD E
ACD ABE
BE
CD
ABC
BC
AC
AB
B
C
ABC
AC BC
E
ABE
AE
BE
CE ABCE
ACE BCE
BCDE
ABCDE
CDE
ACDE
BCE
ABCE
CE
ACE
BCDE
ABCDE
BDE
ABDE
BCD
ABCD
BD
ABD
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.13]
with 2n 2 points each and two with 2n 3 points each. Finally, if two effects in
different alias sets, neither of which is a defining contrast, are used for blocking,
their product is in a third alias set and we have four blocks of equal size. In all
cases, for an effect to be estimable there must be a suppressed effect in the alias set
in addition to any blocking factors.
Designs 4, 5, and 6 can each be blocked into four blocks of six points each by
using as blocking factors the three factors R, S, and RS, which are given in each
case. Design 6 can be run in separate quarters. Designs 1, 2, and 3 may be split
into blocks of sizes 8, 8, 4, and 4. A particularly interesting property of designs 4
and 5 is that they may be blocked, using ABCDE, into the half replicate defined
by I = ABCDE and the remaining quarter. An implication of this is that we
may elect to complete either of these designs if, after the half replicate has been
run, we find ourselves able to make an additional eight runs. Alternatively,
we may choose to run the half replicate first anyway, as a precaution against
finding ourselves in a situation in which we are not able to complete the twentyfour point sequence.
-
[Ch. 8
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
does not, however, give such neat results. There are some useful designs that can
be obtained in this way and in them, too, the least squares estimates of the
estimable effects can be pieced together from the estimates from the constituent
fractions. We shall illustrate the procedure by an example and state the results
for the general case.
Suppose that we take a 2n 1 design defined by I = P where P is some effect,
and add to it the 2n 3 fraction defined by I = P = Q = PQ = R = PR =
QR = PQR. Let S be some other effect. The alias set, which contains S, consists
of S, PS, QS, PQS, RS, PRS, QRS, and PQRS. This alias set is composed of
four pairs of effects, such as S, PS, which are themselves aliased in the half
replicate. If one of the effects in each pair is suppressed, the other four effects
can be estimated from the half replicate without the need for any additional
points. The extra points are needed only to break chains of aliases, such as
S PS, when neither effect is suppressed.
As an example, suppose that in a 2 4 factorial we take the half replicate defined
by I = ABCD and add the 2 3 defined by 1= ABCD = A = BCD = B =
ACD = AB = CD. There are two alias sets:
-
1= A = B = AB,
I = A = CD = ACD,
I = B = CD = BCD,
1= AB = ACD = BCD,
c, d, ab, abcd.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.13]
Both CD and AB have variances a 2 /4. Also the mean, A, and B are estimable
from the original half replicate. Thus all the effects in the first alias set that are
not suppressed are estimable.
We find in considering the submatrix of the cross-product matrix that if we
delete the suppressed effects and write the remaining effects in the order M, A, B,
AB, and CD the submatrix is
U1 = 2
4I 3 + J 3E
3,2 l
8I 2 3J 2 )
E2,3
where E m is a matrix of m rows and n columns with every element unity. The
corresponding covariance submatrix is
,,,
= 2 _ 4 2I3 E
( E I2 + 3J 2 )
Ui
J2
J2
8I2 3J 2 J2
J 2 J2
812-3J2
where the first two columns correspond to C and D, the next two to the nonnegligible pair AC and BD, and the last two to the nonnegligible pair AD and
BC. The matrix U 2 is singular. The main effects C and D are estimable from the
original half replicate, but the addition of the two extra points does not break
either of the chains AC BD or AD BC.
The results in the general case where a 2' - k fraction is added to a disjoint half
replicate are as follows:
(i) Any effects that are estimable in the half replicate are estimable in the
augmented design (the worst that can happen is that the estimates will
be the same);
(ii) If an alias set contains more than one nonnegligible pair, the only
estimable effects that can be estimated are those that are estimated in the
half replicate, and the estimates from the half replicate are the least
squares estimates of the effects from all 2n -1 + 2n k points;
(iii) If an alias set contains only one nonnegligible pair and, also, m pairs
with one effect suppressed and one to be estimated (m < 2k -1 1),
all the effects are estimable.
-
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
In the last case, when m < 21c -1 1, and in the case in which an alias set has
no nonnegligible pairs, the least squares estimates are not simply the estimates
from the half replicate. They may be found by following the procedures derived
in John (1966b) or by using the results obtained by Plackett (1950).
This technique of adding fractions may be used to obtain a design of resolution
V for seven factors in thirty-six runs. The smallest such 2 7 k fraction has
sixty-four runs; any of the half replicates having as the defining contrast an
interaction involving five, six, or seven factors will sufface. A design with fortyeight runs is obtained by using a 3(2 7 - 3 ) fraction; one can, for example, omit the
quarter defined by I = ABC = DEF = ABCDEF from the complete 2 6 design
and add a new factor by putting G = ABCD. The thirty-six point design is a subset of the forty-eight point fraction. It is obtained as follows. We add to the
26-1 defined by I = ABCDEF the four-point fraction generated by I =
+ABCDEF = +ABDEF = ABC = +BCDEF = ...; the seventh factor is
again added by putting G = ABCD.
Also of interest is an eighty-point design of resolution V for nine factors.
This is obtained by adding to the 2 -1 defined by I = AB the 2 7 - 3 defined
by I = AB = CDEFG = ABCDEFG = ACF = BCF = ADEG = BDEG and
then putting H = AEFG and J = BCDE.
-
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.14]
Nested Fractions
171
On the other hand, if he had lost (1), bd, bcd, ab he would have been left with a
twelve-point fraction that can, at best, be called messy. The only half replicate
that it contains is the one defined by I = + ABD.
This suggests that the experimenter should modify complete randomization
by arranging his runs so that if the experiment ends prematurely he still has a
useful fraction to analyze. The experimental strategy should be directed toward
designs in which fractions are nested within the overall design so that a partially
completed design has a high salvage content.
An obvious possibility is to choose as the first eight points one of the fractions
defined by I = + ABCD or by I = ABCD so that even if he finishes only half
his assigned runs he does at least have a resolution IV design. He might then
follow that by a set of four points at the same level of one of the factors, and
thereby obtain one of the 3(2n -2 ) replicates of the type I = A = BCD = ABCD.
We have already noted that the 3(25 _2) fraction defined by I = E = ABCD =
ABCDE can be split into a half replicate and a quarter replicate by using any of
the defining contrasts as a blocking factor. This indicates two strategies. An
experimenter who starts on the twenty-four point sequence but doubts his
ability to finish the program can make use of the fact that the 2 5 -1 design of
resolution V defined by I = ABCDE is included in his set of points and he may
decide to run that half replicate first. On the other hand, an experimenter who
had carried out a complete 2 design in A, B, C, and D (holding E fixed) could,
if he found himself with time for another eight runs, proceed to carry out one of
the 2 -1 fractions defined by I = ABCD at the other level of E, thus converting
his 2 design into a 3(25 _2) design of resolution V.
Indeed, if after he has carried out the 3(2 5- z) fraction defined by I = E _
ABCDE = ABCD which consists of all points except the omitted fraction
e, ade, bde, abe, cde, ace, bce, abcde,
he wishes to go further and add the set
e, ade, bde, abe,
he would then have a twenty-eight point 7(2 5 -3 ) design with alias sets
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
resolution III can always be obtained in the following way. The ith run,
1 < i < n, has the i th factor at its low level, and all the other factors at their
high levels; the (n + 1)th point has all the factors at their low levels.
Taking the model
E(Y) = Po +
we have normal equations X'Y = X'X where X is the design matrix and includes
a vector 1 for P o . The moment matrix X'X and its inverse, the covariance matrix,
are
X'X =
+ (n 3 )J71+1,
(X'X) -1 = 4
)J
4(n 3
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 8.16]
Phixhxi,
P O + 1h 8hxh + 11
h i
E(N1) = Nl
+1X +11
hNh
Xhifht},
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 8
Consider now the set of 2n vectors X l , X2 ,.. ., X0, X12, X13, .... The elements
of X l ,, are obtained by multiplying each element xh1 of X h by x 11 , which is equal
to 1; the elements of X o are the squares of the elements of X 1 . The vectors X h
are linearly independent, i.e., there exists no set of scalars Ch such that l h Ch xhj =
0 for all j. In particular, it is not true that either + 1(2 xh f) or 1 (1 xh f) = 0
for each j. Hence, the set of vectors X 0 , X 12 , ... are Iinearly independent, and
it has already been shown that X l , X 2 , ... are independent of them. It follows
that X l , X 2 ,. . ., X 0 , X 12 ,..., is a linearly independent set of 2n vectors. Thus
r(X) = r(X'X) > 2n. But r(X'X) < N and so N >_ 2n, which proves that every
resolution IV design for n factors must contain at least 2n points. Since we have
already seen several examples of resolution IV 2n/ /2n designs, we know that
this lower bound is attainable.
We now show that when a resolution III design for n factors is folded over, the
resulting design is of resolution IV and can indeed be made into a resolution IV
design for n + 1 factors. We consider the (n + l)th factor to be held at its low
level throughout the resolution III design (if we choose to ignore this factor
there will be no difficulty). We write the X matrix for the resolution III design as
X=(1 U V),
X=(1 U V).
2N
1
(1
U V)
21'V
0 2U'U 0
2V'V
2V'1
0
The main effect submatrix 2U'U is nonsingular. The estimable main effects are
orthogonal to the mean and the interactions.
We have already seen that there are elementary weighing designs for n 1
factors in n runs with resolution III. Folding them over gives minimal resolution
IV designs 2/ /2n for any n. These are not necessarily the most efficient 2n/ /2n
designs, and some more efficient designs are given in the papers by Webb (1968)
and Margolin (1969a) that have already been cited. We shall not give Margolin's
proofs of Webb's conjecture that all minimal resolution IV designs are foldover designs. The reader is referred to Margolin's original papers.
Exercises
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 175
2. (Continuation) Analyze the 3(2 5-1) obtained by omitting the quarter defined by
I = AB= CDE = ABCDE.
3. Find the defining contrasts for the following 2 6-3 fraction: c, ae, bd, adf, bef,
abcf, cdef, and abcde.
4. The point (1) is added to the 2 3-1 fraction, a, b, c, and abc. Find the least squares
estimates of the main effects in the following cases:
(i) All interactions are suppressed;
(ii) All interactions except AB are suppressed;
(iii) All interactions except ABC are suppressed.
5. Obtain a 7(2 7 e) fraction of resolution IV and divide it into seven blocks of two
runs each without losing the resolution IV property.
6. An experimenter runs two half replicates of a 2 4 factorial. They are defined by
I = ABC and I = ABD respectively. There are sixteen observations altogether
since the four overlapping points are duplicated. How would you analyze the
data, assuming that all higher order interactions are suppressed? How is the
analysis modified if the two half replicates are in separate blocks?
7. Healy (1951) gives a plan for a single replicate of a 2 factorial in a Latin rectangle,
i.e., a rectangular array of thirty-two plots arranged in four rows and eight
columns. The interactions ABC, ABDE, and CDE are confounded with the rows.
The first four columns consist of the 2 5 -1 defined by I = BCE, and AB, CD,
ABCD are confounded with columns. The second four columns contain the
remaining sixteen points with AC, DE, ACDE confounded. Reconstruct his
design. Assuming that all higher order interactions are suppressed, confirm that
all the main effects and two-factor interactions are estimable and show how they
are estimated.
8. Finney (1946) describes a potato growing experiment in which four organic
fertilizers were applied in a Latin square design. Each of the sixteen plots was
split into two subplots to which treatment combinations from a 2 2 factorial in
N (nitrogen) and K (potash) were applied. Each whole plot either had (1) on one
subplot and nk on the other, or n on one and k on the other. The following data
are yields of potatoes.
-
D
61
52
n
k
B
(1) 51
A
(1) 48
nk 67
nk 57
A
(1) 32
nk 61
n
k
C
n
k
85
69
80
(1) 85
68
nk 87
68
D
(1) 72
50
nk 94
n
k
93
C
(1) 84
nk 104
n
k
C
n
k
B
n
k
D
70
B
(1) 96
nk 91
A
n
k
91
66
A
75
62
B
85
85
D
(1) 89
nk 83
[Ch. 8
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Analyze the data. Is it necessary to suppress the NK interaction? How would the
analysis be modified if A, B, C, and D were the four-treatment combinations in a
2 2 factorial? How would it be modified if they were a 2 3 1 of resolution III?
Finney always confounded NK between whole plots. Could he perhaps have
confounded the main effects N and K sometimes? Would he have gained anything
by it?
'
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
Fractional
Factorials
with More
Than Two Levels
The fractions of the 2n designs that were discussed in the previous chapter are
of considerable practical use as well as of academic interest. They enable us to
handle many factors without having to make an unreasonable number of
observations, and it seems only natural that experimenters should wish to seek
the advantages of fractionation with factors having more than two levels. New
complications then arise; not only do factors at more than two levels call for
more data points in the full design, but they also have more effects to be
measured.
In a 2,1 experiment with all interactions involving three or more factors
suppressed, there are 1 + n + n(n 1)/2 = ( n 2 + n + 2)/2 parameters to be
estimated. In a 3' experiment each main effect has two degrees of freedom,
corresponding to linear and quadratic effects; each two-factor interaction has
four degrees of freedom, giving a total of 2n 2 + 1 degrees of freedom. In a 5n
design the estimation of two-factor interactions soon gets out of hand; with
only three factors there are already 12 d.f. for main effects and forty-eight for
two-factor interactions.
The interest in fractionation of 3n, 4n, and 5n designs is not merely for mathematical amusement. The model that was used for 2fz designs contained no terms
in xh, and so, if the experimenter has cause to believe that for some factor there is
a quadratic component to be estimated, he must take three or more levels. (It
would be wrong to think that we always pay attention to estimating the quadratic
component, even when we suspect that it is there. In response-surface fitting,
which will be discussed in the next chapter, we often elect to ignore the quadratic
effects in the earlier stages of experimentation and to make decisions about
future experiments on the basis of first-order models.) The consideration of
curvature thus leads us to 3n factorials, and we shall begin this chapter by
recalling some of the properties of 3" designs described in Chapter 7.
177
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 9
We shall continue to use the concept of the resolution of a design that was
introduced in the previous chapter. In view of the fact that the number of twofactor interactions increases so quickly with n, resolution V designs are of little
interest and we shall not say much about them. The major use of these fractional
factorials is in screening experiments, and so most of this chapter will be concerned with resolution III designs, which will often be called main effects plans.
In the next section we shall recall the simplest of the main effects plans, the
Graeco-Latin squares, and follow them with a discussion of 3n ' factorials.
We shall then turn to the series of orthogonal resolution III designs, which are
of considerable practical interest, developed by Plackett and Burman (1946) and
by Addelman (1962). In that section we shall find some fractions of 2m3n designs,
i.e., designs with m + n factors, of which m appear at two levels and the other n
at three levels. The discussion of 2m3n designs will be developed further in later
sections, and the chapter will conclude with a few examples of nonorthogonal
fractions.
We have purposely restricted our discussion in this chapter to these topics.
The reader who is particularly interested may wish to read some of the earlier
papers on the subject of fractionation of sn designs where s = pm and p is a
prime. Among the papers of interest are some on orthogonal arrays. We note in
particular papers by Bose (1947a), Rao (1946) and (1947b), Bose and Bush
(1952), and Finney (1945).
An orthogonal array (N, k, s, d) is a set of N treatment combinations with k
factors each at s levels, which has the property that for any subset of d out of the
k factors all s' of the treatment combinations occur the same number of times;
d is called the strength of the array. An orthogonal array of strength 2 is an
orthogonal main effects plan. The levels of the factors will usually be denoted by
0, 1, 2, ..., s 1. If s is prime, these symbols will actually be elements of the
Galois field GF(s). We shall sometimes write the levels of a two-level factor
symbolically as zero and one; this will be purely symbolic and they will be
treated as the two elements of GF(2) with 1 + 1 = 0. In practice, the levels will
still be 1. The 2e ' defined by I = ABC may be written 000, 110, 101, and
011. Consider the subset of factors A, B. We see that the set of treatment
combinations 00, 01, 10, and 11 occurs once each. The same thing is true for the
treatment combinations of the subsets A, C and B, C. The design is thus an
orthogonal array (4, 3, 2, 2).
-
9.1 3n Designs
The 3 2 and 3 3 experiments were discuseed in Chapter 7. At that time we took
a 3 2 example and divided the four degrees of freedom for A x B interaction into
four components: lin A lin B, lin A quad B, quad A lin B, and quad A quad B.
We shall no longer use that method of subdivision of the interaction sum of
squares because it does not lead to reasonable procedures for finding fractions.
Instead we shall adopt a procedure used previously for confounding.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 9.2]
The three levels of each factor are represented by 0, 1, and 2, and arithmetic is
carried out mod 3. The twenty-seven points of the 3 3 design form a finite
geometry in three-dimensional space. The sum of squares for A may be divided
into two single degrees of freedom, corresponding to linear and quadratic
effects. The linear contrast is the difference between the sum of the observations
at x l = 2 and the sum at x l = 0, which we write as {x 1 = 2} {x 1 = 0}. The
quadratic contrast is {x, = 0} 2{x 1 = 1} + {x 1 = 2}. The equations x l = 0,
x l = 1, and x l = 2 determine hyperplanes (in three dimensions they are just
planes). The degrees of freedom correspond to the two orthogonal contrasts
between the totals of observations on the parallel planes.
For the A x B interaction we take the two sets of parallel planes x l + x 2
0, 1, 2 (mod 3) and x l + 2x 2 = 0, 1, 2 (mod 3). For each set of three planes
there are two orthogonal contrasts, and hence 2 degrees of freedom. We call the
first pair of degrees of freedom the AB interaction and the second pair the AB 2
interaction. Nothing further is gained by considering the planes 2x 1 + x 2
0, 1, 2 because the set of points with 2x 1 + x 2 - c has 2(2x 1 + x 2 ) - 2c, or,
reducing mod 3, x l + 2x 2 = 2c, and this again gives the AB 2 interaction.
The three-factor interaction A x B x C has 8 degrees of freedom and four
components, ABC, AB 2 C, ABC 2 , and AB'C 2 , corresponding to sets of hyperplanes, x l + x 2 + x 3 - 0, 1, 2, x l + 2x 2 + x 3 - 0, 1, 2, x l + x 2 + 2x 3
0, 1, 2, and x l + 2x 2 + 2x 3 - 0, 1, 2, respectively. It is conventional to write
the components of interactions with the exponent of the first factor unity. We
gave an example of confounding the 3 3 factorial in three blocks of nine points
each. Each of the blocks is a one-third replicate of the Pull factorial, which we
may write as a 33-1 fraction or, extending the notation that we introduced in the
last sections of the previous chapter, as a 3 1 / / 9 design. Indeed, each of the blocks
is a resolution III design, which leads us into the next section.
211
220.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 9
In the more general case, where s = pm, the s x s Latin square can be made to
accomodate s + 1 factors, each at s levels, in an orthogonal main effects plan.
An interesting pioneering example of a 5 5-3 , due to L. H. C. Tippett, is reported
by Fisher (1947). The factors involved were four different components of a
spindle used in a cotton mill, each at five levels, and time, observations having
been made at five different periods.
The case s = 4 = 2 2 was also considered in Chapter 7. Here we have two
possible methods of attack. The finite geometry approach that we have adopted
so far implies the use of finite fields. In the case of s = 3 or 5, the elements of
the field are the residue classes mod s. For s = 4 we can denote the levels of each
factor by 0, 1, x, and y (= 1 + x) with arithmetic mod 2. When we blocked the
4 2 experiment into four blocks of four, we took as the blocking factor C:
x 3 = yx l + yx 2 . This also gives us a Latin square 4 3 / /16 main effects plan:
000
l0y
x01
y0x
Oly
110
xlx
yll
Oxl
lxx
xx0
yxy
Oyx
lyl
xyy
yy0.
We also mentioned at that time the second method of attack, which involves
replacing each four-level factor by two two-level factors.
The remarks that were made earlier about the bias resulting from interaction
in Latin square designs are again relevant. In the last design A is aliased with
B x C, B with A x C, and C with A x B.
In addition to the Graeco-Latin squares, there are other larger 3' - k fractions
which are main effects plans. The principle of their constructiop is the same as
that for 2' - k designs of resolution III; we take a basic 3n design and add other
factors by equating them to interactions, or rather to components of interactions. The following example will illustrate the procedure. We shall obtain a
twenty-seven point resolution III 313-10 design and show how it becomes a
3 9-6 in nine blocks of three points each.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 9.3]
181
We begin by taking a 3 3 design in the three factors A, B, and C and then add
new factors by setting
x4
x7
+ 2x3,
x5
= 2X1 + x2 + x3,
= 2x 1 + x 2 + 2x 3 ,
x8
= x l + x2
x1
X10 = Xl
X13 =
+ X3,
x2+
x11 = Xl
x2
x3 ,
+ 2x3,
x6
x9 =
x12
x2
+ 2x3,
xl +
x2,
= xl + 2x2,
X3.
0221100122011
1010021212011
2102212002011
0112200211022
1201121001022
2020012121022
1001202111110
2120120201110
0212011021110
1222002200121
2011220020121
0100111110121
1110102022102
2202020112102
0021211202102
2002101222220
0121022012220
1210210102220
2220201011201
0012122101201
1101010221201
2111001100212
0200222220212
1022110010212.
Suppose now that we decide to block the design by using the last two factors,
M and N, as blocking factors, i.e., by assigning to the same block those points
that have the same value for x 12 and the same value for x 13 . There will be nine
blocks corresponding to the pairs of coordinates 00, 01, 02, ..., and in the
arrangement in which we have written the points they are the first three points,
the middle three points, and the last three points of each column. There are
eight degrees of freedom between blocks. Four of these are the 2 degrees of
freedom each for M and N. The remaining 4 degrees of freedom are for the
generalized interactions of M and N, namely K and L, which also become
blocking factors since we have
X12
X13 = xl + x3 =
x10,
x12
+ 2x13 = xl +
x2
+ 2X3 = x11.
The blocked design is thus a resolution III 3 9-6 design in the first nine factors.
9.3
3n
[Ch. 9
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
x6 = 2x1 + x2 + x3 + 2x4,
x7 = x2
+ 2x3 + x4,
x 9 =x 1 +x 2 +x3 +x 4 .
They obtain their 3 9 / /243 design by adding new factors to the basic 3 5 design as
follows :
x6 = xl + x2 + 2x3 + X5,
x8 =
x2
+ x3 + 2x4 + 2x5,
X7=
x9 = xl + x2 +
x3
+ x4.
EXAMPLE OF A 34-1 DESIGN. Vance (1962) reports on a series of experiments in the course of which a 341 factorial was used. There were four major
operating variables in the treatment of lube oil at a refinery, and these were
taken as the factors in the experiment. The objective of the experimental
program was to find a set of operating conditions that would optimize a measure
of quality in the lube oil, which will be referred to as the response. Their previous
experience in the use of the plant had convinced Vance and his tolleagues that
the quadratic effects should be estimated, and so at least three levels of each
factor should be included.
In this preliminary experiment they were prepared to allow two-factor interactions to be aliased with each other. Their main concern was to obtain preliminary estimates of the linear and quadratic effects, aliased only by higher
order interactions, and to use this information to provide a basis for the design
of subsequent experiments. This approach is similar to the procedure used in
fitting response surfaces, which will be discuseed in Chapter 10.
They had a choice of several possible fractions. In the 2 4 factorial there are
only two half replicates that have ABCD as the defining contrast. There are,
however, no fewer than twenty-four 3 4-1 fractions in which the defining contrast is some form of the four-factor interaction. We can take as the points of the
fraction the set of points on any of the hyperplans defined by
xl + a 2 x2 + a3 x3 + a4 x4 = b (mod 3),
where a, = 1 or 2 and b = 0, 1, or 2.
There is usually no particular reason for choosing any one of these fractions
over the others. Vance elected to use the fraction defined by
X1 + X2 +
X3 + X4 = 0.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 9.3]
183
0012
0111
0210
1011
1110
1212
2010
2112
2211
5.9
16.4
22.2
16.5
29.0
37.4
21.1
51.6
74.5
0021
0120
0222
1020
1122
1221
2022
2121
2220
8.2
30.7
31.0
14.3
55.0
66.3
57.9
76.5
85.1.
We can now carry out the analysis of variance procedure for the basic 3 3
factorial in the usual way and obtain sums of squares for the main effects
A, B, C, and the interactions. These sums of squares are given in Table 9.1. The
sum of squares for D is calculated just as the sum of squares for the other main
effects, by adding the squares of the totals at the several levels of x 4 , dividing by
nine, and subtracting the correction for the mean.
The two-factor interactions are hopelessly jumbled. If we work in terms of the
symbolic components of interaction we can untangle the web to a certain
extent, but it is hardly worthwhile. Consider for example the A x D interaction,
which has four degrees of freedom. The AD interaction involves contrasts
between sums of points with x l + x 4 - const (mod 3). Since we also have the
defining relationship x l + x 2 + x 3 + x 4 = 0, it follows that for these points
(x 1 + x 2 + x 3 + x 4 ) + 2(x 1 + x4 ) - const, i.e., x 2 + x 3 = const, and so the
AD contrasts are also BC contrasts. Similarly, we have x l + 2x 2 + 2x 3 + x4
const, and so the AD contrasts are also AB 2 C 2 D contrasts.
An equivalent approach is to argue that the defining contrasts are I, ABCD,
A 2 B 2 C 2 D 2 . Multiplying by AD and letting A 3 = B 3 = C 3 = D 3 = I gives an
alias set AD, A 2 BCD 2 , B 2 C 2 . Finally, squaring the last two members to make
the exponent of the first letter unity gives the set AD, AB 2 C 2 D, BC. We can
proceed in this way to obtain the aliases of each component (2 d.f.) in the 3 3
experiment. If we ignore interactions involving three or more factors, the alias
sets are
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 9
more meaningful aliasing would have been one where, for example, lin A x lin B
was aliased with quad C x quad D, but we cannot obtain such relationships
using this method of obtaining fractions.
TABLE 9.1
ANALYSIS OF VARIANCE
Source
Total
A
(lin A
(quad A
B
(lin B
(quad B
C
(lin C
(quad C
D
(lin D
(quad D
(Total for main effects
AxB
AxC
BxC
A x B x C (excluding D)
SS
d.f.
26
2
1)
1)
2
1)
1)
2
1)
1)
2
1)
1)
8)
4
4
4
6
15544.5
4496.3
4399.2
97.1
2768.7
2647.5
121.2
5519.8
5516.0
3.8
283.4
213.6
69.8
13068.2
310.8
1232.9
669.8
262.8
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 9.5]
Psxnil
or E(Y) = D13 where D = (1, X) and 13' = Po, P1, P2, ..., Pn.
We wish to find a design such that the matrix D'D is diagonal. Since
xk i = 1 for all h and all i, the diagonal elements of D'D are each equal to N,
and so we require D'D = NI, i.e., that the column vectors of X be orthogonal
to each other and to 1.
We denote by X { the ith column of X, consisting of the values taken by x ti at
each design point. If 1'X i = c { , Margolin (1967) defines X i to be a column
vector of value c i . If c i = 0, X { is called a zero-sum column vector. lf c i 0, X i is
called a nonzero-sum column vector. If D'D is to be diagonal, each X, must
be a zero-sum column vector, which means that half the entries must be plus
and half minus. Similarly, if we let (X i , X; ) denote the inner product X,A j , we
need to have (X i , X; ) = 0 for all pairs i, j(i ^ j). If n = N 1, which is the
largest number of factors at two levels that we can hope to accommodate, the
problem of finding a suitable design becomes one of finding a matrix D of N
rows and N columns with the following properties:
(i) Each element is 1;
(ii) One column of D is 1;
(iii) N -112 D is orthogonal. Such a matrix is called a Hademard matrix.
We shall now show how Plackett and Burman obtained their designs. The
reader who does not wish to follow the derivation, which involves the use of
finite fields, can safely skip to the end of this section, where we list the design
for N = 12. This method of constructing a Hademard matrix is due to Paley
(1933).
x(z) = + 1,
if z is a quadratic residue;
x(z) = 1,
if z is a nonquadratic residue.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 9
It follows that 1 x(z) = 0, summing over all z in GF(pm). Three other results
about the Legendre symbols are needed, and we state them without proof.
(i) Let z' be another element of GF(pm). Then X(z)X() = x(z ), in particular
x( z) = x(- 1 )x(z);
(ii) x( -1) = +1, ifpm = 4k + 1, x( -1) _ 1, ifpm = 4k 1 where k is an
integer;
(iii) Let u and v be two elements of the field u 0 v, p > 2. Then, summing over
all zin the field x(z u)x(z v) = 1.
-
= 1 x(i j)x(Ji) 1.
But with pm = 4k 1 we have x(j i) = x(-1)x(i j) = x(i j), so that
(X i , X1) = 0. The matrix D is thus a Hademard matrix.
We also note that if D is any Hademard matrix of order N,
(D D
D* _ D D)
is a Hademard matrix of order 2N, and so a design for 2N 1 factors in 2N
runs can be constructed from a design for N 1 factors in N runs.
If pm = 4k + 1, Plackett and Burman show that the foregoing construction
procedure can be modified to obtain a Hademard matrix of order 2(pm + 1),
and the reader is referred to their paper for the details. They used this method to
obtain designs for N = 52, 76, and 100. Their design for N = 36 was obtained
by trial.
It should also be noted that if N = p + 1, i.e., m = 1, then, apart from the
last row which represents the base point (1), X is a circulant matrix. We have
= x,, and so in their listing the authors give only one line of each
matrix for those values of N.
As an example we now derive the Plackett and Burman design for N = 12,
p = 11. The elements of GF(1 1) are 0, 1, 2,..., 10 with arithmetic being carried
out mod 11. The quadratic residues are 1 = 1 2 = 10 2 , 4 = 2 2 = 9 2 , 9 = 3 2 =
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 9.6]
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
abdefk
bcefgl
acdfgh
bdeghj
cefhjk
dfgjkl
aeghkl
abfhjl
abcgjk
bcdhkl
acdejl
(1)
n if = n { .n. f /N
for all i and all j; N = I, n i . = I f n. ; is the total number of observations.
Addelman (1962) makes use of this property to develop new orthogonal main
effects plans [see allo Addelman and Kempthorne (1961)].
In an earlier section we presented a 34_2 orthogonal main effects plan: four
factors in nine points. Suppose that we replace one of the three-level factors, say
D, by a two-level factor, E. We may let E take its low level whenever x 4 = 0 or 2,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 9
and its high level whenever x 4 = 1. Then the condition of proportional frequencies will be satisfied and we shall have an orthogonal main effects fraction
fora 2 x 3 3 design. The correspondence between the two designs is
0000
0121
0212
1011
1102
1220
2022
2110
2201
-->
0000
0121
0210
1011
1100
1220
2020
2110
2201.
The important thing is that two levels of D are assigned to one level of E, and
the third level of D is assigned to the other level of E. The condition of proportional frequencies will be satisfied whether the two levels of D go to high E or to
low E, or whichever level of D is chosen to be the odd one. The latter choice
does, however, have a bearing upon the efficiency in larger designs where the
new factor has more than two levels. We could replace two, three, or all four of
the three-level factors by two-level factors. Changing all four factors to two
levels would not have much merit in practice because with three points at one
level of a factor and six points at the other level, we have V(21) = a 2 (1/3 + 1/6)
= a 2 /2. This is the same variance we obtain with a 2 -1 , and that design is of
resolution IV and has one fewer point. The other three designs, 2'3 3 / /9, 2 2 3 2 / /9,
and 2 3 3/ /9, are all useful in practical applications.
Suppose now that we go a step further and in a 4 4 - 2 Graeco-Latin square
design replace one of the four-level factors, D, by a three-level factor, E. There
are now two possibilities of interest, both of which give us proportional frequencies and hence orthogonal main effects plans. We make the correspondence
x 4 = 3 ^ x o = 0, x 4 = 1 or 2xx 5 = 1, x 4 = 2 ^ x 5 = 2. This is a symmetric assignment. There will be four points each at x 5 = 0 and x 5 = 2, and
eight at x 5 = 1. To obtain a measure of relative efficiency in this choice, we can
compare the variances of the linear and quadratic contrasts with the variances
that would have been obtained had we been able to take one third of the points
at each level of E. The relative efficiencies are then linear 3/4 and quadratic 18/16.
Alternatively, we could assign two levels of D to x 5 = 0, and one each to x 5 = 1
and x 5 = 2. In that case the relative efficiency of the linear contrast would be
one, but the relative efficiency of the quadratic contrast would be 18/22. The
difference is hardly worth getting excited about. We might sum it up by saying
that if we are more interested in the linear contrast we should take more observations at the end points. If we want more emphasis on the quadratic term we
should take more observations at the middle value of x 5 . In either case this idea of
going from four levels to three is a useful one. This procedure of replacing a factor
at s levels by another factor at t levels (t < s) is called collapsing the factor.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 9.6]
Addelman's Designs
189
Collapsing is not confined to replacing a factor by one other factor with fewer
levels. We have already mentioned while discussing confounding that a fourlevel factor can be considered as a pair of two-level factors. If, however, we are
interested only in main effects, we can go further and replace a single four-level
factor by three two-level factors. This is achieved by the correspondence
x = 0 -+ 000, x = 1 -+ 011, x = 2 -+ 101, x = 3 -+ 110. Indeed, if a factor has
s levels, where s = t'", t being a prime, or a power of a prime, it may be replaced
by (s - 1)/(t - 1) factors each at t levels. The 45 - 3 hyper-Graeco-Latin square
design can be converted in this way into 4n2l5-3n/ /16, n = 0, 1,2,3,4.
Another technique that Addelman uses is the addition of fractions to increase
the number of levels of a factor. Suppose, for example, that we wish to construct
a 6 x 33 design. We may take a 34 - 2 fraction and run it twice, letting Xl take
the values 0, 1, and 2 in the first replicate and 3, 4, and 5 in the second replicate.
If a 5 x 33 were required, we could then collapse the six-level factor, and have
the desired design.
Addelman uses as basic designs from which to build his plans several of the
standard saturated fractional factorials 27-\ 34 - 2, 215- 11 , 56 - \ 313-1,231-27.
In addition, he uses the following interesting basic plan for 37 / /18. The derivation of this design is given by Addelman and Kempthorne (1961). The eighteen
points fall into two nine-point groups:
00000oo
0112111
0221222
1011120
1120201
1202012
2022102
2101210
2210021
0021011
0100122
0212200
1002221
1111002
1220110
2010212
2122020
2201101.
= xi +
= Xl +
X3
Xl
+ X 2,
X6 = xi + Xl + X 2, X7 = xi + 2Xl + X2'
+ 2, X4 = Xl + 2X2 + 1, X5 = 2xi + X 2,
= 2xi + Xl + X2 + 1.
X2,
X2
X4
Xl
+ 2X2'
2xi
+ 2Xl +
I, X7
With these basic plans the tools are now available to generate a large number
of orthogonal main effects plans, especially in the 2m3 n series.
The Plackett and Burman designs do not lend themselves to modification,
either by collapsing or by replacing factors. The only choice they allow is to
leave out one or more factors, and doing that does not improve the precision of
the estimates of the main effects of the factors that remain. With the 2n - k
fractions it is also possible under suitable circumstances to reverse the replacement procedure by exchanging three two-level factors for a four-level factor.
This requires, however, that the triple of coordinates of the three factors replaced
takes only the set 111, 100, 010, 00I, or else the set 011, 101, 110, 000, giving
C = AB.
X2
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 9
Consider changing the 2' - 4 design, (1), adef, befg, abdg, cdeg, acfg, bcdf, abce
into a 3 x 2 orthogonal main effects plan. The generators of the defining
contrast subgroups are 1, ACD, ABCE, ABF, BCG. At each point
x l + x 3 + x4 - 0 (mod 2). We can therefore replace A, C, and D by a fourlevel factor, letting 000 * 0, 011 -> 1, 101 2, 110 3. We then introduc the
three-level factor by collapsing the four-level factor that we have just acquired;
we collapse levels 2 and 3 to x 8 = 2. The final design follows, together with the
original eight points:
BEFGH
(1)
00000
adef
befg
abdg
cdeg
01102
01011
acfg
00112
11110
10012
bcdf
10101
abce
11002.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 9.8]
Using this idea Margolin obtains several fractions of 2m3n designs by collapsing factors in resolution IV 3n P designs. The example that we have just mentioned is a design of resolution V for 2 1 3 3 / /27. Collapsing a second factor would
give 2 2 3 2 / /27. He also gives a 2 2 3 4 / /81 fraction.
A second method of obtaining fractions is to run different 3n - p fractions at
each level of a two-level factor. An obvious example of a 2 1 3 5 / /2 1 3 4 would be to
run a resolution V 3 5 -1 fraction at low A and another 35_1 (or the same one) at
high A. Similarly, a 2 5 3'/ /96 fraction may be formed by running one of the
resolution V 2 5 -1 fractions at each level of the three-level factor. Margolin gives
two designs formed in this way. A 2 4 3'/ /24 design for four factors A, B, C, and
D at two levels each and E at three levels is obtained by running the half replicate
defined by I = ABCD at x 5 = 0 and x 5 = 1 and running the half replicate
defined by I = + ABCD at x 5 = 2.
-
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 9
(1) aef
cef ac
de adf
cdf acde
bf
bce
bdef
bed
abe
abcf
abd
abcdef
Oa
3fl
ly
28
3y 2fl 18
08 la 2y
2a 38 0p
1 fl Oy 3a.
Thus our design actually amounts to using the fourth factor (Greek letters) as
a blocking factor and taking any three of the four blocks.
The second design is a resolution V fraction with forty-eight points. This
design is the 3(2 8-2 ) fraction defined by I = ACE = BDF = ABCDEF. The
alias sets follow. The effects that correspond to degrees of freedom in the
P x Q x R interaction, and are therefore suppressed, have been underlined.
This design may be run in three blocks of sixteen runs each. An example is given
by John (1970).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
10
Response
Surfaces
Most of the experimental designs that have been considered so far have had
their origins in agricultural experimentation. The development of 2n k fractional
factorials has taken place in industrial experimentation, but they were introduced
in an agricultural context by Finney (1945). The concept of response surfaces and
designs for their exploration began in the chemical industry. The early work was
done by statisticians and chemical engineers in the Imperial Chemicals Industries
in Great Britain. The first major paper in the field was published by Box and
Wilson (1951). Its title, "On the Experimental Attainment of Optimum Conditions," is indicative of its philosophy.
Suppose for simplicity that we wish to investigate the production of lome
chemical product in a pilot plant, and that there are two factors, temperature
and pressure, that are to be considered. The experimental procedure will be to
make several runs on the pilot plant at different temperatures and pressures and
to observe on each run a response, y, such as the yield of the product, or the
purity of the product, or the amount of raw material converted, and so on.
We have a two-dimensional factor space with two quantitative factors. We can
conceive, therefore, of the expected response E(y) as a function of the levels of
the factors. If x l denotes the temperature and x 2 the pressure we have
-
Y = f(xj, x2) + e,
f
with the usual assumptions about the random error e. The function f(x 1 , x 2 ) is
single valued and, writing 77 for E(y), the surface represented by 17 = f(x 1 , x 2 ) is
called the response surface. If the x l and x 2 axes are taken in the usual way
and the y axis is taken perpendicular to the plan of the paper, the response
193
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
i= 1,2,...,k.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.1]
A simple example of such a design is the main effects only 2' - k fractional
factorial where the coordinates of x j take the values 1. Before considering
optimal designs it should be recalled that the coefficients S, are affected by the
choice of the scale of x { . If x 1 denotes the length of some physical component
measured in feet, we can triple the value of J by measuring x, in units of yards
instead. It is desirable, therefore, to scale the factors uniformly, and we shall do
this by imposing the, following restrictions upon the coordinates x, where x j' is
the value of x j at the jth experimental point:
x1 =
0 ,
x41 = b,
where b is a constant. The first of these requirements is a shift in the origin so that
tr(S
) _
h =0
Ah 1 ,
where X h are the latent roots of S and A o = N. The trace is minimized subject to
h = kb, in which case,
the condition l A h = tr S = N + kb or
Ah =b
for all h where h = 1, 2, ..., k. This requires that S be a diagonal matrix, or,
equivalently, that the columns of X be mutually orthogonal. This condition for
X is both necessary and sufficient for a design to be optimal and for such a
design we have v($t) = b - laa, i > 0.
Some examples of optimal designs are the 2n ' fractions and the Plackett and
Burman designs for n factors. For k = 3 we can use the vertices of the regular
-
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
tetrahedron with the center at the origin and any orientation. Also, for k = 2
the vertices of the regular polygon inscribed in a circle with the center at the
origin form an optimal design.
E(Y1) = R 0 +
t
Nhixihxlt
h<t
Y^
xih =
1
xlhxlt x'hX =
x hXji = 0,
4
x1i
= c + d.
22
^ xlnxlt = c,
The matrix S now takes a convenient form. In its top left-hand corner is the
principal minor, U, with (k + 1) rows and columns which will now be discussed. The remaining rows and columns consist of zero elements everywhere
except on the main diagonal. The diagonal element corresponding to P i is b,
so that P = x1iy1/b and V(Pt ) = a 2 /b. Similarly, /hi = 1 xlhxliyi/c and
v(h2) = a2/C.
=[
a blk
bi k cJk + dlkJ
qlk
[1 k SJ k + tIk]
Taking the product UU -1 = Ik+ 1 gives a set of five consistent equations in the
four unknowns, p, q, s, and t.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.2]
(10.1)
aq + b(ks + t) = 0
(10.2)
bp + q(kc + d) = 0
(10.3)
bq+ds+ct+kcs=0
(10.4)
dt
(10.5)
ap
kbq
1.
The last equation gives t = 1/d. Eliminating t from Equations 10.2 and 10.4
gives s = (b 2 ac)q/bd, and solving Equations 10.1 and 10.3 gives bp =
(kc + d)q and q = b/[a(kc + d) kb 2 ].
If we now write [d{a(kc + d) kb 2 }] -1 = A, these solutions become
p = d(kc + d)A, q = bdA, s = (b 2 ac)A, and t = 1/d. If kb 2 = a(kc + d)
the design is singular.
It would be convenient if we could choose the design points in such a way that
cov (Po, Ahh) = 0 for all h, and cov (,hh, Pit) = 0 for all h, i, h i. The first
condition cannot be satisfied, for we have
COV (Po, Phh)
= qa2 = bdA
V (Pht)xhx{
h<{
h t
h<i
This is to be a function of p 2 . The first term, V($0 ), is a constant. The seconddegree terms are p 2{V(jh ) + 2 cov (Po, $hh)}. The fourth-degree terms must
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
But t = 1/d, and it follows that a necessary and sufficient condition for
rotatability is d = 2c, or since d = J J xh4 ^J xhJx,1,
xh1 = 3 1 xhj j.
J
b = 2.3k -1 ,
4.3k-2, d
c=
= 2.3k -2 .
2k3 1 ^
q= 3k1 1, s=0,
t=2.3k
-a'
= (2k + 1) 2 xh
-I-
xh + 4
xnxi
h<f
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.3]
3.2/9 at ( 0.4, 0.4). Box and Hunter (1957) give diagrams for the variance
contours for three designs for k = 2. The first of these is the 3 2 design, in which
they have scaled the factors so that x1 = 4 = 9, i.e., the levels of Xh are
\/(3/2), 0, +-,/(3/2). The third design is the 3 2 factorial rotated through 45 0
and the second is one of the polygonal designs that will be considered in the next
section.
For the 3 3 design we shall write v = NVa -2 . At the origin we have v = 7;
at the center points of the faces of the cube, v = 7; at the midpoints of the
edges, v = 9.25; and at the corners, v = 13.75. The minimum value of v occurs
when 1 = 4 = 4 = 1/3 and is 4.75. For any radius p the minimum variance
occurs on the main diagonals of the cube.
We are again faced with the fact that there are twenty-seven points in the 3 3
design and only ten coefficients in the second-order equation. Debaun (1959)
presents lome fractions of the 3 3 design. These are quite different from the
fractions based upon hyperplanes that we considered in the previous chapter;
those fractions are of little help to us in the present situation. Other designs
based on fractions of 3'1 factorials are given by Box and Behnken (1960).
Debaun considers five subsets of the complete factorial, each of which is
symmetrical about the origin. They are
,
(i)
(ii)
(iii)
(iv)
In comparing the designs he uses as his criterion the information per point,
which is v -1 . He shows that the complete factorial is a relatively inefficient design
by this criterion and recommends designs (iii) and (iv). We shall now consider
design (iv) and give an example.
The Cuboctahedron
For the cuboctahedron with n center points we have N = a + 12 + n,
b=8,c=4,d= 4,andA-'=64n.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
If there are no center points the design is singular. If, however, n > 0, we
have
1
_ 4 n
1
_1
S=
p n'
q __ 2n'
t 4'
16n '
and the design is orthogonal if, and only if, n = 4.
In that case we have
v=4
+4
3+44).
-80 z2 -0.5 z3 -4
x3 = 2
= 0 '
x2 _ 0.2 '
xl 4
1
was fitted to the data. Afterwards the authors replaced x 2 by x 4 , which is the
ratio of liquid rate to packing height, and obtained a somewhat better fit
(although it was still far from ideal). The three center points provide an unbiased
estimate of error with two degrees of freedom. The data and the analysis of
variance table follow.
y
66
39
43
49
58
17
5
40
65
7
43
22
31
35
26
x1
X2
X3
1
+1
1
+1
1
+1
1
+1
0
0
0
0
0
0
0
1
1
+1
+1
0
0
0
0
1
+1
1
+1
0
0
0
0
0
0
0
1
1
+1
+1
1
1
+1
+1
0
0
0
X4
11.75
11.75
3.75
3.75
11.00
11.00
3.67
3.67
23.50
7.50
7.80
2.50
5.50
5.50
5.50
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.4]
TABLE 10.1
ANALYSIS OF VARIANCE
Source
SS
d.f.
Raw Total
Mean
Corrected total
First-order terms
Second-order terms
Lack of fit
Error
24,874.0
129.1
24,744.9
17,940.2
5,253.3
1,510.7
40.7
15
MS
5,980
876
504
20
295
44
25
1
14
3
6
3
2
cos 2 8 sine 0 + 2i
1 sin 0 cos 0 = 0.
xil = 4 = cos 2 0 =
1x
jl f2
1 sine 6 = n/2;
= 1 sin 0 cos 6 = 0.
The first-order design is orthogonal and satisfies the conditions that we imposed
on first-order designs in the previous sections. It is easily shown that the design
retains these properties if it is rotated through any angle a, i.e., if xfl = cos
(a + 2jwln) and x 52 = sin (a + 2jrr/n). A larger design may be made up by using
several polygons and letting the hth polygon have n h vertices and radius Ph; in
particular, we may add n o center points at the origin.
When we turn to second-order designs we note that for the single polygon
4 + xiz - 1 at each point, and the design is singular. Suppose that we add n o
center points and let N = n + n o . It is necessary that n > 5.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
1 (cos
1 cos
1 sin
cos 2 6 sin
6=
= 1 cos 0 sine 0 = 0.
The sum of the fourth powers also vanishes, giving cos 3 0 sin 0 = cos 0
sin3 0 = 0, and also 1(cos 4 6 + sin 4 6 6 cos 2 6 sine 6) = 0. But
(cos 2 6 + sin 2 6) 2 =
hence,
1 sine 6 cos
6 = n/8.
Furthermore,
cos 4 0 =
sin 4 6.
b = n/2,
c = n/8,
d = n/4.
or
n = no,
which calls for more center points than many experimenters might regard as
practicable. The elements of the covariance matrix are
p=n5
q=no 1 ,
s=
noln -1 ,
=4n -1 .
The variance of the estimate of the response at a point a distance p from the
origin is given by
o_2 V(9) = n' + (2n -1
2n0')p 2 + (n 1 + 3n 1 )p 4 .
= n -1 (1 + 4p4),
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.4]
It is interesting to consider the case in which the variance is the same at the
center of the circle (p = 0) and on the circumference (p = 1). For this to occur
we must have
(2n -1 - 2no') + (no' + 3n -1) = 0,
or n = 5n 0 , a particular example of which is given by the pentagon with a single
center point. The minimum variance now occurs at p 2 = 1/2, and is given by
3a 2 /n; the variance at p = 0 and p = 1 is 5o 2 /n.
EXAMPLE. The following example is given by J. S. Hunter (1960). There are
two factors, reaction time and temperature, for a batch process, and the levels
are given by
time -90 temp - 205
x l = 10 , x 2 = 10
This experiment is actually part of a larger experiment and we shall refer to it
again later. The design was an octagon with four center points. The fitted
second-order equation was
y = 87.3750 - 1.3838x 1 + 0.3625x 2 - 2.14384 - 3.09384 - 4.8750x 1 x 2 .
(Hunter retained four decimal places in the calculated coefficients for use later in
reducing this equation to canonical form.) The data and the analysis of variance
table follow.
Y
Xl
X2
88.0
86.8
78.8
84.5
91.2
77.4
0
0
-1
+1
-1
+1
0
0
-1
-1
+1
+1
xi
X2
89.7
85.0
81.2
83.3
79.5
81.2
0
0
/2
-\/2
0
0
0
0
0
0
/2
-\/2
TABLE 10.2
ANALYSIS OF VARIANCE
Source
SS
d.f.
Raw total
Mean
Corrected total
First-order terms
Second-order terras
Lack of fit
84,653.24
84,436.96
216.28
16.37
171.96
16.18
11.77
27.95
12
Error
Combined residual
MS
1
11
2
3
3
3
6
8.18
57.32
5.39
3.92
4.66
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
a=N=n c +n a +n o ,
b=n,+2a 2 ,
c=n c ,
d=2a 4 .
a 4 = n,.
n, + 2a4 = 3n^,
For orthogonality N n, = (n, + 2a 2 ) 2 , or,
n o +n a =
4 a 2 (n + a 2
nc
by proper choice of n o .
If k = 2 we have n c = 4, a = -,/2. The cube points and the star points form a
regular octagon with vertices on a circle of radius -,/2. From the results of the
previous section we recall that eight center points are needed for orthogonality.
If k = 4, we have a = 2, n o = 12.
If k = 5, we may take n c = 16 (the half replicate). Then n o = 10, a = 2.
If -,/(n c ) is irrational, we must sacrifice either rotatability or orthogonality. One
possibility is to choose the points so as to attain orthogonality while coming as
close as we can to rotatability. For k = 3, rotatability requires a 4 = 8. Then, for
orthogonality as well, we should need n o + 6 = 15.5. We should, therefore,
take n o = 9 and choose a to give orthogonality, i.e., so that (8 + 6 + 9) 8 =
(8 + 2a 2 ) 2 or a = 1.662.
It will already be apparent to the reader that in these designs, just as in the
polygon of the previous section, the price of orthogonality with rotatability is
taking several center points. Some experimenters will not be happy about
devoting such a large portion of their experimental effort to duplicating a
single point.
It is not necessary that the cube portion of the design consist of a complete 2'
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.5]
design; the use of the half replicate has already been mentioned. In seeking to
reduce the number of points in a composite design, we may note that the
response at a center point estimates Po ; the difference between the average of the
responses at the two star points on the ith axis and the average at the center
points gives an estimate of fl, and the difference between the responses at the
two axial points gives an estimate of 2afl,. Thus the center points and the star
points give estimates of all but the interaction terms fl,, and the Jatter have to be
estimated from the cube points. We may therefore use a fraction, if there is one
that will allow all two-factor interactions to be estimated, assuming the main
effects to be known. If we are prepared to suppress all interactions with three or
more factors, we may thus use any 2k ' fraction that contains no more than one
2 f.i. in any alias set. (If there is a single 2 f.i. among the defining contrasts, that
will contradict our simplifying assumption that 1 Xjh Xji = 0 for all pairs and
complicate the calculations, but the parameters will still be estimable.) Hartley
(1959) suggests using, when k = 6, the quarter replicate defined by I = ABC =
DEF = ABCDEF. Consider, for example, the AB contrast. If we suppress
higher order interactions, its expectation is 16(fl 12 + fl), and we already have an
estimate of f 3 from the star points.
Aia, et al. (1961) used a central composite design with k = 3, a = 1.6818, and
six center points in an experiment on the precipitation of stoichiometric dihydrate of calcium hydrogen orthophosphate (CaHPO 4 .2H 2 O). Among the
responses that they considered was the percentage yield. The three factors used
were the mole ratio of NH 3 to CaC1 2 in the calcium chloride solution, the
addition time in minutes of the NH 3 -CaCl 2 mix, and the starting pH of the
NH 4 H 2 PO 4 solution used.
The scaled factors were
-
x 2 = (t 50)/24,
x 3 = ( pH 3.5)/0.9.
The fitted second-order equation was
y = 76.03 + 5.49x 1 0.71x 2 + 10.18x 3 0.88x 1 x 2 1.46x 1 x 3 0.29x 2 x 3
+0.694 + 0.432 7.18x3.
They later decided to drop the x 2 terms from the model. The new fitted equation
was then
= 76.39 + 5.49x 1 + 10.18x 3 1.46x 1 x 3 + 0.644 7.22x3.
The changes in the quadratic coefficients and the constant term when x 2 is
omitted are small. There is no change in the coefficients of x l and x 3 because
these terms are orthogonal to the x 2 term and the other terms.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
X1
-1
1
-1
1
-1
1
-1
1
-1.6818
+1.6818
X2
X3
X1
-1
-1
1
1
-1
-1
1
1
0
0
-1
-1
-1
-1
1
1
1
1
0
0
52.8
67.9
55.4
64.2
75.1
81.6
73.8
79.5
68.1
91.2
0
0
0
0
0
0
0
0
0
0
X2
X3
-1.6818
0
80.6
+1.6818
0
77.5
0
-1.6818 36.8
0
+ 1.6818 78.0
0
0
74.6
0
0
75.9
0
0
76.9
0
0
72.3
0
0
75.9
0
0
79.8
TABLE 10.3
ANALYSIS OF VARIANCE
Source
SS
d.f.
Total
First-order terms
Second-order terms
Lack of fit
Error
770.96
610.93
135.15
18.71
6.17
19
3
6
5
5
Nhxih
h
h
h
+1
PhiXn XJI
Nhhxjh,
t
h
where P o + P O is the expected response at the origin in the wth block; S ow is the
wth block effect, and we impose the side condition Lw flownw = 0; zfw is a dummy
variable which takes the value + 1 if the jth point is in the wth block, and is
zero otherwise. We denote by zw the average n,,/N.
It is desirable that the block effects be orthogonal to the parameters of the
response surface. This is achieved if, and only if, the corresponding design
vectors are perpendicular, i.e., if for each w
(Zlw - zW)xlh =
(10.6)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.6]
for each h,
(z5, ZW)xlhxfi =
(10.7)
i,
(Z!w - i.)XJh
(10.8)
= 0
for each h. Since we are confining our attention to designs for which
! xh = I! xlhxlt = 0 and I 4,, = b, the first two conditions become
!
0,
(10.6)'
= 0.
(10.7)'
Zlwxlh =
!
Zlwxlhxlt
The third condition is, for all the points in the wth block,
xh = n,,b/N.
The set of points in each block must thus comprise an orthogonal first-order
design with 1 xih proportional to the block size.
An example for k = 2 is provided by the regular hexagon with an even number
of center points. This design may be split into two blocks of size N/2 by dividing
the hexagon into two equilateral triangles, and letting each block consist of one
of the triangles together with half the center points.
Thus, with two center points we might have
Block 1
xl
1.000
xl
x2
0.000
0.500
0.866
0.500 0.866
0.0001
0.000
Block 2
1.000
0.500
0.500
0.000
x2
0.000
0.866
0.866
0.000
Indeed, if we take six center points and put three of them in each block, we can
simultaneously obtain orthogonal blocking, orthogonality (of the estimates of
quadratic coefficients), and rotatability.
A central composite design can be divided into two rotatable first-order designs,
namely the cube points and the axial points. Suppose that this is done and that
n oc of the center points are included in the block with the cube points and
n oa = n o n oc are included with the axial points.
For the blocking to be orthogonal we must have
n c = (n c
n oc )b/N, 2a 2 = ( 2k + n oa)b/N.
Eliminating b/N,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
A convenient example is the case k = 4 and n, = 16. We have already seen that
for orthogonality and rotatability n o = 12 and a 2 = 4. Orthogonal blocking is
then obtained by putting n o , = 8 and n oa = 4.
The cube points may be divided into two half replicates confounding the fourfactor interaction. Each half replicate is an orthogonal first-order design, and so
we can add four center points to each 2 -1 and thereby have a design for n =
16 + 8 + 12 = 36 divided into three orthogonal blocks of twelve points each.
The octagonal design with four center points given as an example in the
section on polygonal designs can be run in two orthogonal blocks. The blocks
correspond to the columns in the listing of the data. If we consider the octagonal
design as a central composite design for k = 2 with a = 4 and n, = 4, the first
block consists of the "cube" points together with two center points. The second
block contains the star points plus the two remaining center points.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.8]
2. Even if we can find a set of optimum conditions for operating the plant,
we may not be able to maintain them. Suppose, for example, that we have a
polymerization process using an acid catalyst. A simplified description of the
process might be that the feed stock is passed through a reactor containing acid
of strength x l at a temperature x 2 , and a fraction y of it is converted.
The first-order model gives an equation
Y = No + Nlxl +
N2x2.
[Ch. 10
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
x2
_ temp 160
10
xi
+1
+1
1
1
0
x2
+1
1
+1
1
0
68.0, 66.8
60.3,61.7
62.2, 64.6
54.3, 56.5
60.3, 62.3
5'
time
90
x1 = 10 ,
temp 205
x2 = 10
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.9]
This design is the first column of the octagonal design given earlier. The fitted
model including the x 1 x2 term is
y = 78.0 + 2.0x 1
1.4x 2 5.1x 1 x 2 ,
and we see that the interaction coefficient is considerably larger than either of the
main effect terms.
The design was therefore augmented to the octagon with four center points by
adding the second column of points. In this instance the experimenter did not
divide the design into two blocks. The analysis of variance table and the fitted
equation have already been given.
aF/8x 1 = 0,
aF/8x 2 = 0
x2 =
c2-35
5
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
whence
xi = 0.41,
4 = 0.34.
Zl
= 1-0.69 Z, '
0.
Z
=[
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.11]
9 = 87.3750 1.3838x
This is allo a family of ellipses, but in this case the center is at x l = 3.7369,
x 2 = + 3.0028, which is well outside the area of experimentation. It may even
be outside the range in which the plant can be operated. In the area where the
experiments took place the response surface is a rising ridge, and further experimentation might take place in the direction of a line toward the center.
The canonical form is
y = 90.50 5.10z1 0.14z,
where z l = 0.64x 1 + 0.77x 2 + 0.06 and z 2 = 0.77x 1 + 0.64x 2 4.79. Increases in the value of zi bring about sharp decreases in the yield.
When the contours are hyperbolas, the response surface is a saddle surface
with the center of the family at the center of the saddle. Moving away from the
center along one of the axes will produce an increase in the yield. Moving away
along the other axis will result in a drop in the yield. The experiment by Aia et al.
(1961) gave a saddle surface.
As the discriminant approaches zero, the family of curven approaches a
family of degenerate parabolas, and the contours become a series of pairs of
parallel lines. This is a ridge surface, and the optimum procedure would be to
find the highest of the parallel ridges and to remain on it.
With three factors the geometrical representation becomes more difficult.
There are several worked examples in the literature, particularly in the paper
by Box and Youle (1955) and the book by Davies (1956). Further examples
appear from time to time in chemical and agronomic journals. Examples of
third- and fourth-order models are not found as often because the designs and
the interpretation of the results are, on the whole, too complicated for general
use by engineers. Third- and fourth-order rotatable designs are discuseed by
Gardner, et al. (1959), and in a series of papers by Draper (1960a, b; 1961;
1962).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 10
under conditions that produce profitable yields, the attention of the operators is
directed toward keeping the plant working at those conditions and maintaining
the status quo. Perhaps it would be possible to improve the yield somewhat, but,
on the other hand, tinkering around with the operating variables might cause a
drop in production. This defensive approach is bolstered by the conviction that
the research personnel will have to make large changes in the operating variables
in order to obtain meaningful results.
A new plant may produce at a lower yield than had been expected because of
problems of scale up. If a plant to produce a thousand barrels a day is to be
designed on the basis of a pilot plant that produces two barrels a day, some
dimensions will have to be increased five hundred fold, some by \/5, and some
by the cube root. When the actual plant is built, it may well happen that the
actual optimum operating conditions are not those that were obtained on the
pilot plant, and the yield will fall short of the projections. Little will be gained by
asking the research staff to generate more data on the pilot plant. If they did a
reasonable job the first time, further data will only serve to confirm their
earlier results. What is needed at this stage is not more information about how to
run the pilot plant but information about optimizing production on the full-size
plant that has already been built.
Evolutionary operation was proposed by Box (1957) as an operating procedure
for nudging a plant toward optimum conditions without causing dramatic
disturbances and catastrophic cutbacks in production. It is designed as a method
of operation that can be carried out by the plant personnel themselves with a
minimum of supervision, or interference, from the research people. Indeed, it is
recommended as a standard operating procedure, whether or not there is concern
about the performance of the plant.
An evolutionary operation program for a plant contains two basic steps:
(i) A routine of systematic small changes is introduced in the levels of the
operating variables being considered;
(ii) The information generated is fed back to the plant foreman or other
supervisor.
Box and Hunter (1959) show how the latter objective is facilitated by using
simplified calculations and emphasizing graphical presentation. They give an
example of an application to a batch process in which the two operating variables
being monitored are temperature and reaction time. We shall use part of their
example. There is nothing in the theory to prevent us from monitoring several
variables but, for practical purposes, two or three variables are enough to
handle under normal circumstances. Box and Hunter also discuss the case in
which three variables are monitored.
The operating cycle is a cycle of five points that form a 2 2 factorial with a center
point. If the plant is currently operating at a temperature of 120 with a reaction
time of sixty minutes, and if fluctuations of 10 in the temperature and 10
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 10.11]
minutes in the time are contemplated, the cycle would consist of the five points
120, 60 min;
110, 50 min;
130, 70 min;
110, 70 min;
130 , 50 min.
0
The cycle is repeated several times. Each time the responses Y1, Y2, Ys, Y4, Y5
are recorded and their averages are posted. The main effects and the interaction
of the two factors are calculated, and when one or more of these three effects
becomes significant, decisions about changes in operating conditions are made
by the plant foreman.
The most important feature in step (ii) is the information board. Table 10.4
TABLE 10.4
YIELDS DURING THE FIRST FOUR CYCLES
Conditions
Cycle
1
2
3
4
63.7
62.1
59.6
63.5
62.8
65.8
62.1
62.8
63.2
65.5
62.0
67.9
67.2
67.6
65.3
62.6
60.5
61.3
64.1
61.7
TABLE 10.5
INFORMATION BOARD-CYCLE 4
Requirement
T,
E 62.2
M
P 63.4
-TIME-
65.7
2.3
Standard deviation
Prior estimate of o
2.3
1.8
[Ch. 10
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
contains the data given by Box and Hunter for the yields during the first four
cycles of their process. Table 10.5 is the format of an information board at the
end of the fourth cycle. The information board is easily kept up to date, and the
data are clearly and simply displayed on it.
The calculation procedures recommended by Box and Hunter make use of
the range to provide an estimate of the standard deviation, a. We discuss this in
the next section.
= RCk, \n 1 ) = R x fk , _.
n=
k
=4
5
9
10
10
0.34
0.30
0.24
0.23
0.40
0.35
0.27
0.26
0.42
0.37
0.29
0.28
0.43
0.38
0.30
0.29
0.44
0.39
0.31
0.30
0.45
0.40
0.31
0.30
0.45
0.40
0.31
0.30
0.46
0.40
0.32
0.31
0.46
0.41
0.32
0.31
--.l
Operating Conditions
A (time) effect
= t(Ya +
B (temperature) effect = t(Ya +
A x B
= t(Y2 +
Change in mean
= t(Y2 +
(ii)
(iii)
(iv)
(v)
(vi)
2
190.7
63.6
62.8
0.8
253.5
63.4
3
190.7
63.6
67.9
-4.3
258.6
64.6
Calculation of Effects
+2.5
.Y4 - Y2 - Ys)
-1.3
.Ys - Y2 - Y4)
+0.2
Ya - Y4 - Ys)
.Ya + Y4 + Ys - 4Yl) = +1.4
1
185.4
61.8
63.5
-1.7
248.9
62.2
Calculation of Averages
4
200.1
66.7
62.6
4.1
262.7
65.7
5
185.9
62.0
61.7
0.3
247.6
61.9
TABLE 10.6
3.66
1.83
3.10
8.4
= 6.76
= 2.25
=
=
=
=
Calculation of Limits
For new average
2a/ V n = 2.25
For new effects
2a/ V n = 2.25
For change in mean 1.78a/Vn = 2.00
Previous sum s
Previous average s
New s = range x Ikon
Range
New sum s
New average s = (sum)/(n - 1)
Calculation of a
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
(Ch. 10
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
1. Show that the polygonal design retains its properties even if rotated through an
angle a, i.e., it is still a rotatable design and n center points are still needed for
orthogonality.
2. Prove that for any rotatable design, satisfying the conditions of the early part of
the chapter, section 10.2,
a -2 V(9o) = p + (b -1 + 2q)p2 + (s + t)p4 .
3. Prove that, in the notation of Box and Hunter, a design is both orthogonal and
rotatable if, and only if,
p = (k + 2)/(2N), q = 1/(2NA2),
t = 1 /(2N)t 2).
4. Prove that for prediction based on a 3 3 factorial design with the vertices of the
cube at ( 1, 1, 1) the variance of a predicted response is a minimum at the
points where 3x2 = 3x2 = 3x3 = 1.
5. Find the variance of an estimated response at the point (x 1 , x2i x 3) for Debaun's
designs (2), (3), (5), and (6).
6. Show that for fitting a first-order model in three dimensions, with the points to
be taken on the surface of a sphere with unit radius, the vertices of a regular
tetrahedron with any orientation is an optimal design for four points.
7. Consider a 3 2 design with k = 2 that has been rotated through 45 so that the
design points are (0, 0), ( V2, 0), (0, v/2), and so on. Analyze the design
and compare the variance contours with those of a 3 2 design in the usual
orientation.
8. A regular icosahedron inscribed in a sphere of radius 3 has twelve vertices given
by (0, a, + b), ( b, 0, a), ( a, b, 0) where a = 1.473 and b = 0.911.
Consider this set of points together with some center points as a second-order
design.
9. (Continuation). Another regular figure is the dodecahedron with twenty
vertices given by (0, c -1 , c), (c, 0, c '), (c -1 , c, 0), (1, 1, 1)
where c = 1.618. Consider this set of points plus some center points as a
second-order design.
10. (Continuation). Show that the dodecahedron with 5n center points can be
divided into five orthogonal blocks of 4 + n points each. Each block is a regular
tetrahedron plus n center points.
0
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
11
Incomplete
Block Designs
where the letters denote gasolines and each set of three gasolines is assigned to a
different car. Such designs are called balanced incomplete block designs.
This chapter will begin with a discussion of balanced incomplete block designs.
This will be followed by sections on the general incomplete block design, in
which the blocks may be of different sizes, and where there may be no semblance
219
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
(i) N = rt = bk,
where N is the total number of plots;
(ii) A(t 1) = r(k 1);
(iii) b >: t.
A design with b = t and r = k is raid to be symmetric.
To establish restriction (ii) we consider any treatment, such as A. The treatment A appears in r blocks, in each of which are also (k 1) other treatments.
There are, therefore, r(k 1) plots, which are in the same block as a plot
containing A. These plots have to contain the remaining (t 1) treatments
exactly \ times each. Hence, t(t 1) = r(k 1). The four parameter values
b = 12, k = 4, t = 8, and r = 6 satisfy restrictions (i) and (iii). However,
restriction (ii) gives A = 18/7, which is not an integer. Hence, there is no
balanced incomplete block design with those values of b, t, r, and k.
The incidence matrix of a design is the matrix N = ( n,) of t rows and b
columns; nis is the number of times that the ith variety occurs in thejth block.
For a balanced incomplete block design, n is either one or zero, and n,2f = n i; .
The matrix NN' has t rows and t columns. It is of considerable interest in the
development of the theory of incomplete block designs. If we denote the elements
of NN' by q1 , we see that q = I f n2, and q ,, = L n,,n hf , ( i 0 h). For the
balanced incomplete block design we have qi , = r and q, h = a, (i s4 h); we may
therefore write
;
{;
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.2]
where I t is the identity matrix of order t and Jt is a square matrix of order t with
every element unity.
To evaluate the determinant of NN' we subtract the first column from each of
the other columns, and then add all the other rows to the first row. It is now
readily seen that
INN'l =(r)t) t-1 (r+(t l)))=(rA) t-l rk>0.
Thus NN' has rank t, and so N has rank t. However, N is a matrix of t rows and
b columns so that r(N) < min(b, t). Hence, t < min(b, t), and the inequality
(iii) is proved. This inequality is due to Fisher (1940). The proof that has been
presented follows that of Bose (1949).
If the design is symmetric, b = t and N is square. In that case NN'I = ^Nl 2 ,
and so (r A)t - lr 2 is a perfect square. This implies that when t is even, (r A)
must be a square. Consider the set of parameters t = b = 22, r = k = 7, A = 2;
t is even but r A = 5, which is not a square, and so no design with these
parameters exists. This result [Shrikhande (1950)] shows that the conditions
given are necessary, but not sufficient, for the existence of a balanced incomplete
block design.
these designs
There are, however, smaller designs for some values of t and k. The design given
at the beginning of the chapter with t = b = 7, r = k = 3, and 2. = 1 is an
example.
A design with t = 6, b = 10, r = 5, k = 3, and A = 2 is
ABE, ABF, ACD, ACF, ADE, BCD, BCE, BDF, CEF, DEF.
A design for t = 9, b = 12, r = 4, k = 3, and A = 1 can be obtained by using
orthogonal Latin squares. (The design is employed in the example in the next
section.) A design with t = 16, b = 20, r = 5, k = 4, and A = 1 may be
constructed in a similar fashion. Both designs are from the orthogonal series of
Yates. Their derivation will be discussed in Chapter 13. The second design
follows. We denote the treatments by 1, 2,..., 16. The treatments are written
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
in five 4 x 4 arrays and each array forms a complete replicate. The rows are the
blocks.
II
I
1 2 3 4
5 6 7 8
9101112
13 14 15 16
1
2
3
4
5 913
6 10 14
7 11 15
8 12 16
III
1 61116
2 5 12 15
3 8 914
4 7 10 13
IV
1
2
3
4
71214
8 11 13
51016
6 9 15
V
1
2
3
4
81015
7 9 16
61213
5 11 14
This design has at least two applications outside the field of experimental
design. In each of the five groups of four blocks every treatment appears exactly
once. The design may, therefore, be used in the following situation to allocate
bridge players to tables. Suppose that sixteen bridge players are gathered together for an evening and that there is enough time for five games to be played at
each table. How do we arrange the players so that each player plays five games;
four tables are in continuous use and no player has to sit out for a time; and
every player has the opportunity to play one game at the same table as every
other player. The solution is to let replications correspond to games and treatments to players. Thus, during the fourth game of the evening the players at the
first table are 1, 7, 12, and 14; at the second table they are 2, 8, 11, and 13, and so
on.
The second application was found in Great Britain before the Second World
War in professional motorcycle racing on cinder tracks, a sport which is still
popular there. The tracks are about 350 yards in circumference. Four riders take
part in each four-lap race, and an evening's program calls for about twenty
races. Usually the evening is devoted to team races between various teams in a
league, but occasionally the riders race as individuals. The following situation
then occurs. There are sixteen riders; they are to be arranged, four at a time, in
such a way that each rider races five times, and, during the evening, he races once
against each of the other fifteen men. This is achieved by using the balanced
incomplete block design and letting treatments represent riders and blocks
represent races. Unfortunately, the program cannot be arranged so that no
rider is obliged to ride in two consecutive races.
A design with t = 8, b = 14, r = 7, k = 4, and \ = 3 is obtained when a 2 3
design is repeated seven times in two blocks of four runs each time, confounding
in turn the three main effects and the four interactions. Writing, 1, 2, 3, 4, 5, 6,
7, 8 for (1), a, b, ab, c, ac, bc, abc, respectively, the design is
1357 1256 1234 1458
2468 3478 5678 2367
1368 1278 1467
2358
2457
3456
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.3]
The design that we have just given for t = 16 could be derived by adding
d, ad, bd, ... = 9, 10, 11,.... Then the first replicate is obtained by dividing the
2 4 factorial into four blocks, confounding C, D, CD. The effects confounded in
the other replicates are A, B, AB; AC, BD, ABCD; ABC, AD, BCD; BC, ABD,
ACD.
The problems of the existence and construction of balanced incomplete block
designs have been of considerable interest to both statisticians and algebraists.
(They will be the topic of Chapter 13.) The major paper on the construction of
designs is by Bose (1939). The Fisher and Yates tables contain a listing of almost
all the known designs for r < 10 and k < 10. The restrictions on the parameters
have led to the investigation of other types of incomplete block design, notably
the partially balanced incomplete block designs of Bose and Nair (1939); these
designs will be discussed in the next chapter.
+;3 +e L ,,
where y, f is the observation, if there is one, on the ith treatment in the jth block,
i-, is the effect of the ith treatment, fi, is the jth block effect, and ei, is the random
error with the usual assumptions. The mean p and the treatment effects -rt are
unknown constants. The block effects may be fixed or random; we treat them as
if they are fixed. It is important to note that the model assumes that there is no
interaction between treatments and blocks.
The normal equations are
G=N+r2f i +k,1$i ,
Ti = r + rfj
B1 = k +
+
nijfj + kl^,,
(11.1)
(11.2)
(11.3)
where Ti is the sum of all the observations on the ith treatment and B, is the sum
of all the observations in the jth block.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
We now eliminate the block effects from Equation 11.2 and obtain
kTT
(11.4)
1h
Alf h .
We call Q, the adjusted treatment total for the ith treatment; it is easily seen
that 1, Q, = 0. Imposing the side condition l h fh = 0, and recalling that
r(k 1) = A(t 1), we obtain
kQ j = ^1tfi .
ctQil(At).
The adjusted treatment totals are not independent. To derive the variance
we note that
V(Q j )
The expression 1 nij Bj T, is now the sum of r(k 1) observations on treatments other than the ith treatment. Then
k 2 V(Q { ) = r(k
1) 2 a 2 + r(k
1)a 2 ,
and
V(Q1) = r(k 1)a 2 /k.
It is clear from symmetry that cov (Q,^, Q,) is the same for all pairs h, i (h 0 i).
Then
0 = V(> Q ) = tV(Qi) + t(t 1) cov (Qh, Q,),
{
and so
cov (Qh, Q^) _
r(k 1) o2
k(t 1)
= \a2 /k.
It follows that
V(fh Tt ) = 2ka2/(At).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.3]
/( ,1t ) .
( ca) ka2
The analysis of variance table is slightly complicated by the fact that treatments are not orthogonal to blocks. We take the sum of squares for regression
G + 1, TT T1 + I, B; p; and then subtract the sums of squares for the mean
G 2 IN (which we write as C), and for blocks (ignoring treatments), 2 Balk C.
The remainder is called the sum of squares for treatments (adjusted for blocks).
We write it as St (aai) . Then
(T1
n11B5/k) Tf =
Q 1T,
= k
Q?/(\t).
TABLE 11.1
ANALYSIS OF VARIANCE
SS
Source
d.f.
N 1
1 1 y Jk C
Total
b1
Blocks (ignoring treatments) I BB lk C
Treatments (adjusted for
IQ1 = k Q?/(t) t 1
blocks)
Ntb+1
By subtraction
Residual
The residual sum of squares is the sum of squares for intrablock error. In the F
test for the hypothesis that all the treatment effects are zero, the mean square for
treatments (adj) is tested against the error mean square.
The efficiency of an incomplete block design in which each treatment appears r
times is measured relative to the complete block design with the same number of
replicates. For a complete block design with r observations on each treatment,
V( Th T1 ) = 2a 2 /r. If, for an incomplete block design, the average of the variances of all contrasts Th T1 ) is 2a 2 /a, the efficiency of the design is defined to
be E = a/r.
For the balanced incomplete block designs we have a = At/k, so that E
,1t/(rk). It is clear that for any design E < 1. Some authors write T 1 = Q1 /rE and
(
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
St(BuJ) _ QZ/rE. That sum of squares is also called by some authors the sum of
squares for treatments eliminating blocks.
Under the normality assumption the hypotheses -rh ri = 0 may be tested by
the t test or by Tukey's method; Scheff's S method may also be used for testing
the more complex contrasts.
EXAMPLE. The following data are taken from a dishwashing experiment
[John (1961b)]. The treatments were detergents and the response observed was
the number of plates washed under standard test conditions before the foam
disappeared. In the experiment, detergent solutions are made up and plates
soiled with a standard soil are washed one at a time until they are clean. The
testing procedure calls for three basins to be used (i.e., for three treatments to be
tested simultaneously), and the three operators wash at a common speed during
a test. A block is thus a set of three operators testing three detergents simultaneously. We have t = 9, b = 12, r = 4, k = 3, and A = 1. The data and the
analysis of variance table follow. The letters denote treatments and the responses
are given in parentheses.
1. A (19) B(17)
2. D (6) E (26)
3. G (21) H(19)
4. A (20) D (7)
5. B (17) E (26)
6. C (15) F (23)
7. A (20)
8. B (16)
9. C (13)
10. A (20)
11. B (17)
12. C (14)
C(1l)
F (23)
J (28)
G (20)
H(19)
J (31)
TABLE
E(26)
F (23)
D (7)
F (24)
D (6)
E (24)
J (31)
G (21)
H(20)
H(19)
J (29)
G (21)
11.2
ANALYSIS OF VARIANCE
d.f.
Total
Blocks (unadjusted)
Treatments (adjusted)
Residual
35
11
8
16
SS
1512.75
412.75
1086.81
13.19
MS
37.52
135.85
0.82
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.5]
given earlier, and the design for t = 9, used in the example, are all resolvable
designs. Bose (1942c) showed that the following condition is necessary for a
balanced incomplete block design to be resolvable:
b> t +r-1.
If b = t + r 1, the design is said to be affine resolvable. Bose's condition can
be derived from the weaker assumption that t is a multiple of k. It was subsequently derived from this assumption by Roy (1952), Mikhail (1960), and
Murty (1961). We now give the proof by Murty.
Let t = nk where n is an integer, and b = nr. We have
r _ A _ r) r A
t-1
k-1
tk k(n-1)
Then
r.lr(n-1)rnrbr
t -1
t-1
t-1
...,
, ... ,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
proper. If ri = r for all i, the design is called equireplicate. The most commonly
used designs are proper, binary, and equireplicate.
For all designs we have
Rl t = Nl,,,
Kl b = N'lt,
where 1,, denotes a vector of n unit elements. For a proper design, K = kI;
for an equireplicate design, R = rI. Some authors let r and k denote the vectors
of ri and k,; they then write r and k for the matrices that we have called R
and K.
Let yifm denote the mth observation on the ith treatment in the jth block; for a
binary design we omit the subscript m. The model is
Yijm = !L + Ti +
Pi + eijm ,
where , Ti , and ,S are defined in the same way as they were for the balanced
incomplete block design. We denote by T, (3, T, and the corresponding vectors
of effects and their estimates. For the present, Ti and ,8 are assumed to be
unknown constante.
The normal equations are
ri f,+
G=N11+
Ti = ri + r,f, +
Bf =ki+
kj
ni , ft> ,
n ij f,+kfftf ,
11.5)
i = 1, . .., t,
(11.6)
j=1,...,b.
(11.7)
nijBj/k> = rif,
1 (1 niJnh5Iki) Th.
(11.8)
N 1tR 16K
T = Ri t R N
B
%
T
K1b N' K
F=
0
[N '
-
It
NK -1
N'R -1 Ib
(11.9)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.5]
and
1 kjpj = 1'Kp = 0,
^ =K -1 BK - 'N 'T
1 b .
Source
SS
1 1 1 y j m G Z IN
Blocks (ignoring treatments) B' K 1 B G 2 /N
Treatments (adjusted)
Q'R
Residual
By subtraction
Total
d.f.
N1
b 1
t1
Nbt+1
If there are some cells with more than one observation, i.e., n t5 > 1, we may
take out of the residual a sum of squares within cells 11 t ijm (Y iim y ;5.) 2 for
[Ch. 11
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
the error term and attribute the remainder to interaction between treatments and
blocks. For binary designs we assume that there is no interaction.
N -1 0
R NK - 'N'
(R NK - 1 N')R - 'N a 2 .
K N'R -1 N
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.7]
Then A*A* - I = I gives four equations
AB + H'B 21 = I,
(11.10)
ABia + H'B 22 = 0,
(11.11)
HB 11 = 0,
(11.12)
HB 12 = 1
(11.13)
Multiplying Equations 11.10 and 11.11 on the left by 1' and recalling that
1'A = 0, we have
1'H'B 21 = 1'
and
1'H'B22 = 0,
Multiplying Equation 11.10 on the left by B 11 gives B11AB11 = B11; multiplying on the right by A gives AB 11 A = A. It follows that AB and B 11 A are
idempotent. Taking the transpose of Equation 11.10 and noting that B 11 and A
are symmetric, we have, after multiplying on the right by T,
B 11 AT + B 1 HR = T;
but AR = Q and HT = 0, and so we have obtained a solution vector B11Q = T,
and B 11 is a solution matrix. Furthermore,
2
cov T = cov B11Q = B11AB11a 2 = B11a .
Let P l = (A + H'H)
-1
This result implies that if P is any solution matrix we may, in computing the
variance of the estimate + of a contrast 0, act as if P were the covariance matrix
of the estimates R.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
1[ AtI AJ kl
kl'
0],
kI
A* -1 =
`t
kJ
1'It
1/t
so that
Bll = at (I` t J `)'
and
T = B 11 Q = kQ/(at).
In using the second method it is easier to take H = \/(A/k)1' so that H'H =
AJ/k and A + H'H = AtI/k. Then (A + H'H) -1 = k1/,1t and t = kQ/(At).
Taking the side condition as H',r = 1'T, we have A + H'H = (AtI + (k ^1)J)lk,
and (A + H'H) -1 = {kI (k ^1)J/t}/(,1t).
Side conditions other than H' = 1 or H' = Rl are sometimes useful. Consider
a design in which a single plot with a control treatment is added to each block of
a balanced incomplete block design. The first design in this chapter for seven
treatments in blocks of three would become a design for eight treatments in
blocks of four. Denoting the control treatment by 0, the new design would be
OABE, OCDE, OACF, OBDF, OADG, OBCG, OEFG.
Let t, b, r, k', and A be the parameters of the balanced design. The whole
design has b blocks of k = k' + 1 plots each, ro = b, ri = r (i > 0). Then,
using the first row and column for the control treatment,
r1
_1 bk'
A
[rl t (r + ,1t)It ^1Jt1
We choose H = (h o , hlt), in order to make A + H'H a diagonal matrix; but
h hh o l ^
H'H = of hh lt h2 Jt 1
and so we wish to have hh o = r/k and h 2 = A/k, or,
h = 1/(/k),
ho = rI1^(ka).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.9]
With this choice of H we have
1 [bk' +r2/A
A +HM
( + At)It ']
whence
-0
kAQ0
kQ,
_ r(r + At)
, T__
i r + At
(l
> O).
II BCE,
III DE,
IV EFG.
E(z) = T1 + N1 - T2 - N1 + T2 + N2 - T5 - N2 + T5 + N4 - T7 - N4
= T 1 -
T7-
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
(BJ k
where ji and T I denote the interblock estimates; and Tf will be used to denote
the intrablock estimates.
Consider first the balanced incomplete block design. The normal equations
for interblock estimation are
G=N+^rTt ,
n, JB, = rk + rT { + A 7" Th ,
(h # i ).
We shall denote 1 ni5BJ by T. With the side condition 1'r = 0, the first equation
gives = G/N, and the second equation becomes
rk
T,_ TirA
In the example of the balanced incomplete block design given earlier,
234
221
215
194
253
247
234
233
266
0.33
4.00
6.00
13.00
6.67
4.67
0.33
0.00
11.00
0.33
2.22
6.22
12.89
5.89
3.55
1.67
0.22
10.11
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.10]
R1
b
bk
1'R
NB G
b1 0 NN' R
J
R [:1
or
N(B G 1/b) = (NN' RJR/b)T.
If we apply the side condition 1'R'r = 0 the equations become
G/N = and
so that
T = (NN') - 'N(B G1/b) _ (NN') - 'NB 1(G/bk);
the existence of the interblock estimates requires that NN' exist, and hence that
the incidence matrix N has rank t.
We now have two sets of estimates: T = B 11 Q (or some other function of Q),
and T, which is a function of B and G. Because, for any i and any j, cov (Q ; , B.) =
0, it follows that the two sets of estimates are orthogonal, and, under normality,
independent.
and
V(^) = c'Pca.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
* _ cV() + cV(^)
V(0) + V(+)
If we knew v and af, we could now obtain &*. The original method of Yates
for the balanced incomplete block design is to use this weighted estimate, but
with the weights computed by substituting for o and a estimates obtained from
the data. Rao (1947a) derived combined estimates under the assumption that the
e 5 and the P are normally distributed. For the balanced incomplete block design
the methods of Yates and of Rao give the same estimates. Rao's derivation will
be given later in this chapter.
We shall now confine our discussion to the case of balanced incomplete block
designs. In that case, P = kI/(At) and V(^) = c'cka/(At). For the interblock
estimates, NN' = (r A)I, + and
(NN , ) _ 1 = I
rd
(rA)(r+(t-1)d)
^1J
I
rA1
(rA)rk'
ra
_ c'NB _ c i Ti '
r,1
c'ca2
()rA
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.101
= c c .
w l + w2
SS
Source
1 1 y g G 2 /N
Total
Treatments (ignoring blocks) r' 1 T{ G 2 /N
Blocks (adjusted for treatBy subtraction
ments)
From intrablock
Intrablock error
analysis
d.f.
N1
t1
b1
Nbt+1
ilbl adJ
E(S au) =
But,
V(B5) = af = k 2 ab + ka,
V (T=) = r (ab +
tee),
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
Writing EQ and Eb for the mean squares for intrablock error and for blocks
(adjusted for treatments) respectively, we obtain
Q = Eei &2 =
(En Ee)(b 1)
(N t)
+/!* _ +^ +
ww(+ )
i4 (r
+ A t f + )a ^k(r ^) A) __ + ( ktv +
) rk)te
and replace o and ab by $' and Q6. This is essentially what Yates (1940) did.
Graybill and Seshadri (1960) have shown that this estimate is unbiased; Graybill
and Weeks (1959) have shown that it is based on a set of minimal sufficient
statistics.
+T
xt
T` + At + N r (
`
T1
1 1T1 G
rl At + N
T,(rkAt)rT1 +AGTi
Art
+ Wi
At(t 1)
Thus, we can think of W/At(t 1) and Wi /r(t k) as the intrablock and interblock adjustments to the raw treatment means T{ /r. We now combine the two
estimates, using the weights w l = At/(ka) and w2 = (r A)/of to obtain the
estimate (T* + *) = (Ti + 9W)/r = Y,/r, where
B r (At(t 1 1)
r(t w? k) ) (w l + w 2) -1
af ka
ob
(11.14)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.11 ]
(Eb Ee)(b 1)
t(k 1)(b l)Eb + (t k)(b t)Ee
For the symmetric design with b = t, 0 takes the simpler form
9=Eb EQ /t(k-1)Eb .
If Eb < Ee , it is usual to take 0 = 0. This is equivalent to putting Eb = Ee in the
formula and to acting as if there were no block effects; thus the design is analyzed
as a completely randomized design.
Yates also considered the situation in which the blocks can be broken up into
c groups of bie blocks each, each group consisting of r/c complete replications
of the treatments; r/c is an integer. Although Equation 11.14 still holds, the
estimate of ob is changed. We return to Scheff's method of calculation and add a
term for the sum of squares between groups in the analysis of variance table.
Let G denote the group total for the gth group. Then
Gg k Q, _ T{2 G 2
Bf
Sb' 8a^ k k f N/c + At
r + N
Assuming that
r,, g
and
V(G) = bV(B,),
b(b c + 1)
V(B)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
If the design is resolvable, the blocks can be arranged to form single replicates.
In this case, c = r, and the previous result simplifies to
ob = ( Eb E )r/{k(r 1)}.
Q
e rt(k 1)E
(EbEe)r
b
+k(brt+ 1)Ee
A special case is the balanced lattice. This is the balanced design with t = k 2
r = k + 1, and b = k(k + 1). We have already seen examples for t = 9 and
t = 16. In this case, the formula is further simplified to
,
III
A 37 C 27
B 37 H 50
D 90 E 89
F 28 G 71
A 15 D 23
B 47 G 64
C 35 F 39
E 22 H 18
I
A 38
C 49
E 32
G 64
B 29
D 28
F 29
H 32
V
A 23 F 39
B21 D 14
C 18 H 10
E 23 G 53
VI
A 66
B 23
C 22
D 23
IV
A 3
B 45
D 11
F 39
VII
G 68
F 46
E 28
H 39
A 28
B 10
C 32
D 18
H 30
E 40
G 33
F 23
E 13
C 36
G 24
H 37
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.11 ]
The various totals for each treatment and the estimates of the treatment effects
are
A
T,
Tt
Q,
Y,
W,
Tt
T*
210
439
-9.5
220
118
-2.4
-7.3
-3.0
212
500
-38.0
186
-297
-9.5
2.9
-7.9
219
439
-0.5
234
172
-0.1
-7.3
-1.0
207
467
-26.5
198
96
-6.6
-2.6
-6.2
-
247
472
11.0
257
109
2.8
-1.8
2.2
243
482
2.0
244
15
0.5
-0.1
0.4
G
377
616
69.0
366
-119
17.2
22.2
17.8
H
216
447
-7.5
225
98
-1.9
-6.0
-2.3
Source
SS (Intrablock)
SS (Interblock)
d.f.
MS
Total
Replicates
Blocks
Treatments
Intrablock error
19,123.99
4,977.11
10,428.37
1,794.72
1,923.79
19,123.99
4,977.11
8,994.25
3,228.84
1,923.79
55
6
21
7
21
428.30 Eb
91.61 EQ
The weighting factor 0 is given by the formula for the resolvable case:
_ 7(428.30 - 91.61)
56 x 428.30 + 28 x 91.61 = 0.08876.
Then W, = 6Ti - 7T1 + G and Yt = Ti + 0W. The estimates have just been
given; T* = Y1 /7 - where = G/56 = 34.48.
In the factoraal experiment, the treatment contrasts are of primary interest.
When the joint estimates are used, the C contrast is Y5 + Y6 + Y, + Y8
Y, - Y2 - Y3 - Y4 = 254. Dividing by 8r gives the estimate, 4.54, for
the main effect of C. (James and Bancroft called 2 1 the main effect and estimated it by 9.1). The hypotheses /3 = 0 may be tested by the F test under
normality. The numerator of the test statistic is 254 2 /56 = 1152.1; the denominator is (1 + ( t - k)0)EQ = 140.4. In this particular experiment, the only two
significant effects were the main effects of C and K; for the latter, Bk = - 4.0,
with mean square 896.0.
If the intrablock analysis is used, the estimate of the main effect of C is
= k 1 Q 1 /(8At) = 2(149)/64 = 4.66. The corresponding sum of squares is
(149) x k/(8)t) = 693.8. This is tested against Eef and, again, C and K are the
-
P*,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
only two significant effects. The sums of squares for the several contraets add up
to the sum of squares for treatments, adjusted for blocks. They are
C P K CP CK PK CFK
1152.1 240.3 896.0 73.1 126.0 301.8 283.5
84
85
86
87
88
89
80
81
82
83
Raw total
Mean
Total
Blocks (unadjusted)
divided into
Treatment component
Remainder
Treatments (adjusted)
Treatments (unadjusted)
Blocks (adjusted)
Intrablock error
Source
81
k- 1 L BJ - 8 1
[L T?/k(r - A)] - [81rk/(r - A)]
83 - 84
kQ'Q/At
r : ! L T? - 8 1
S3 + 8 6 - 8 7
82 - 8 3 - 86 = 82 - 8 7 - 8 6
80
Y'y
G2/N
SS
N-b-I+l
b - 1
1 - 1
b - 1
1 - 1
1 - 1
b - 1
N
1
N - 1
d.f.
ANALYSIS OF VARIANCE
TABLE 11.6
(b (t (b (I (I (b (N -
NfL2
NfL2
(N -
+ (r - A) L -rNk + (N - k)ag
+ (r - A) L -rNk + ttk - k)ag
I)a~ + (N - Ik)a~ = (b - I)a~/k
l)a~ + At L -rNk
l)a~ + r L -r~ + (I - k)ag
l)a~ + (N - I)a~
b - 1 + l)a~
l)a~
l)a~
Na~
(N - k)a~
orr +
+ r L orr +
Na~
r L
a~ + ka~
l)a~
+
+
ESS
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
where P; , e{; are random normal variables and and Tl are unknown constants.
We have V(y) = ob + o, cov (yt; , yt - ; ) = ab ifj = j' and zero ifj j'.
If V is the covariance matrix of the observations Y, the maximum likelihood estimates are obtained by minimizing the quadratic form [Y' E(Y')]
V -1 [Y E(Y)] of the multivariate normal distribution of the y.
If the observations in Y are arranged by blocks, V consists of a series of square
matrices a Ik + abJ k along the main diagonal and zeros elsewhere. Then V'
consists of matrices Ik /al [abJk /o(Qe + kab)] along the main diagonals and
zeros elsewhere. The quadratic form to be minimized in order to obtain the
maximum likelihood estimates may now be written
= 11(y,r *
T*) 2
oe(Q f
kab)
(B' k *
ntiT)2
Differentiating,
Differentiating, and recalling that Rl = Nl, we have
f
R1* RT *]
(Fa
8r = Q [T
NB Rlk* NN'r*] = 0,
whence
b1 NN',r*] =0.
Q[QAs *]+Qf [NB R
The first term alone gives the intrablock estimates; the second term gives the
interblock estimates.
Writing w l = 1 /v and w2 = k /v? gives
(w 1 A
+ k NN') T* =
w,R
[w,Q
w1
k w2) NN') T*
+ k N ` B b111
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.14]
h#t k
and > hi = 1 n hjn ij For a binary design, A h i is the number of times that the hth
and ith treatments appear in the same block. The combined estimates can thus
be obtained by substituting P i , R, and A, for Q, ri , and 'h in the solutions to
the intrablock equations. As before, we substitute for a and ab estimates from
the intrablock and interblock analyses of variance.
For the balanced incomplete block design, the methods of Yates and of Rao
give the same combined estimates. This is not, however, true in the general case
[see Sprott (1956a)]. It should be noted that the use of Rao's method does not
require that the matrix NN' be of full rank. We shall use this method in the
next chapter for the simple lattice design in which n 2 treatments are tested in a
design with k = n, b = 2n, and r = 2, in this case, b < t.
for all pairs h, i, where d is some constant. Summing over all i, 1 < i < t, we
have
(t 1)d = (t l)vhh + r
'
vii 2
r / vht,
where the prime denotes summation over all i, except i = h. However, since
Vl = 0, l i vhi = 0, and the equation becomes
(t 1)d = tv,^ h + tr (V),
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 11
= {( t
for each h, and the diagonal elements of V are all equal. Furthermore, all the
off-diagonal elements of V are also equal, and, since v hh + ( t l)V hi = 0, V
must be of the form
V = c(It
Je /t),
E = 2a 2 /rv,
where
hn
vti 2vnt)Q 2 ,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 11.14]
shown that the nonzero latent roots of B 11 are the reciprocals of the nonzero
roots of A with the same multiplicities. Thus, if the nonzero roots of A are
denoted by 0i and each root is counted as many times as its multiplicity,
= (t 1) { or
'}
',
which is the harmonic mean of the nonzero roots. We can proceed to find an
upper bound for 8.
The nonzero latent roots of A are all positive, and so their harmonic mean is
not greater than their arithmetic mean. Hence,
(t 1)S < tr (A) _
m f /k ; ,
1 2
)
-1 (pt
+ q) 2 = k; /t.
[Ch. 11
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
ABCDABC,ABCDABD,ABCDACD,ABCDBCD.
Suppose that there are t treatments in b blocks of size k, and that each treatment appears r times. The parameters of the balanced incomplete block design
are t, b, r' = r b, k' = k t, and A. The diagonal elements of NN' are
and
kA= (rk r+'\')I t ^1*Jt =(tIJ)A*,
which differs from the normai equations for the balanced incomplete block
design only in the substitution of )* for A.
Imposing the side condition H'T = (A*/k) 112 1'T = 0, we have A + H'H =
tA*It /k, and 1 = kQ i /(t.k*). Then V( Th, - T i ) = {(t 1)k/t 2 A*}o, and the
efficiency of the design is E = t,1*/(rk).
The residual sum of squares can be divided into two components: the sum
of squares between duplicates and a remainder attributable to interaction between
blocks and treatments. The analysis of variance table follows. Interblock estimates and combined estimates may be derived in the same manner as they were
for the balanced incomplete block design.
TABLE 11.7
ANALYSIS OF VARIANCE
Source
Total
Blocks (unadjusted)
Treatments (adjusted)
Intrablock error
Interaction
d.f.
N 1
b 1
SS
1 y 2 GZIN
Bj lk G 2 f N
t 1
k 7- Q;/(t ) *)
b(k t)
(b 1)(t 1)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 249
Exercises
1. Is the equation
E(Sm aai) = a (bk t) + o(b 1)
true for any binary, proper, equireplicate design? Is it true if any of the three
restrictions, binary, proper, and equireplicate, are removed?
2. A design for two treatments has p pairs of blocks. Each block has three plots.
In each pair one block has two plots with A and one with B, and the other has two
plots with B and a single plot with A. Analyze the design. How would your analysis
be modified if p = mq, and the p pairs are actually m pairs at each level of a
factor with q levels?
3. Apply the methods of this chapter to the case of a randomized complete block
design in which the first treatment is missing from the first block.
4. In a resolvable balanced incomplete block design consider the first block in the
first replication. Let m, j denote the number of treatments that this block has in
common with the jth block of the !th replication (1 < i <
_ r, 1 < j < b/r).
Show that the average of the m, j is m = k 2 /v, and that their variance is given by
(m, j m) 2 =
k(t
15
where n = tik. For an affine resolvable design mt, = m for all i, j [Bose (1 942c)].
5. Find the combined estimates for the extended block design, Sec. 11.15.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
12
Partially Balanced
Incomplete
Block Designs
Much of our emphasis in the last chapter was upon balanced incomplete block
designs. Unfortunately, such designs do not exist for all combinations of
parameters that we might wish to use. In particular, the requirement that A be an
integer imposes a severe restriction upon the number of treatments for which
balanced designs of a reasonable size can be found. It will be recalled that if there
are t treatments each repeated r timer in blocks of size k, then A = r(k 1)1
(t 1). If (t 1) is a prime, r has to be a multiple of (t 1), and then there is
the further restriction that b = rt/k has to be an integer. For example, if t = 32,
r must be a multiple of 31; if, in addition, k is odd, and thus prime to 32, b has
to be a multiple of 31 x 32.
The characteristic property of a balanced incomplete block design is that
V( fh - fi ) has the same value for all pairs, h, i, of treatments. An alternative to
requiring balance is to find a design in which the condition of equal variances is
modified somewhat. This can be achieved by the use of partially balanced
designs. In a partially balanced design with two associate classes, V(fh fl )
may take either of two values, depending upon whether the hth and ith treatments are first or second associates of each other. When there are m associate
classes, V( Th - f, ) may take any of m values.
Partially balanced incomplete block designs (PBIB designs) were introduced
by Bose and Nair (1939). Their idea has been developed considerably since then,
largely by Bose and his students. In 1952 Bose and Shimamoto introduced the
concept of partially balanced association schemes and the definition of a
partially balanced design was rephrased in terms of this concept. We shall use
the definition given by Bose (1963) in a review paper.
The symbol v will be used to denote the number of treatments. This will
i^,j1l
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
rv=bk,
^ni =v 1.
Pik = n 1 ,
k
if
ij;
Pk = nj 1,
if
i =j,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 12
Most of the research carried out so far has been concerned with designs having
two associate classes. Chapter 14 will be devoted to the construction of designs
from association schemes. Bose and Shimamoto (1952) classified all the known
PBIB(2) designs into five types. Simple designs are those for which either A l or
A, = 0. The other designs correspond to one of the following four association
schemes: group divisible, triangular, Latin square, and cyclic. Extensive
collections of designs are given by Bose and Shimamoto (1952), and by Bose,
Clatworthy, and Shrikhande (1954). For m = 2, the relationships between the
parameters just given take the simpler form:
+n 2 =v 1,
Pij +
p1 2 = n l 1,
Pi + P12 = ni,
niP12 = n2Pii,
n1P22 = n2P12.
Pl
n -2
0
n(m )]'
= 1[ 0
P2
0
= [n
n-1
n(m 2),
It can be shown that a necessary and sufficient condition for a PBIB(2) association scheme to be group divisible is that p1 2 (or P1 2 ) = 0. It is customary to
abbreviate group divisible to GD.
As an example of a GD design, consider the following design for v = 6:
1,2,3; 3,4,5; 2,5,6; 1,2,4; 3,4,6; 1,5,6.
The three groups are 1 and 2, 3 and 4, 5 and 6. We have A l = 2, X1 2 = 1.
We shall show in Chapter 14 that the following inequalities hold for all GD
designs:
r>_Al,
rkA2 v>-0.
Bose and Connor (1952) have divided the GD designs into three classes:
(i) Singular designs having r = A l ;
(ii) Semiregular designs having r > d l and rk = A 2 v;
(iii) Regular designs having r > A l and rk > Azv.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 12.2]
nhiniifil k.
nhfTh
Writing S1(h) = 1 s (TS) where the summation is made over all the first associates
of the hth treatment and defining S2 (fh ) similarly for the second associates,
we have
kQ h = r(k l)fh
1S1(h)
A2SI(fh)
k _ (,12 A l )J
r(k 1)+j[I {r(k 1) +A 1 +nA2 na l },
r(k-1)
+a LI (A2 va
k 1
Al)
JJ
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 12
The expression Q h + S(Q) is the sum of the Q. for all the treatments in the
group. We also have
2ka2
V(Th-T(
V(ThTi)=r(k-1)+,1
i r 1
_(A2 i) 1
mnJ J'
T2 = (Qi
+ 7Q 2)/16,
Treatments appearing in the same row, or column, are first associates. Thus the
first associates of 1 are 2, 3, 4, 5, 6, 7, and the second associates are 8, 9, 10. For
this scheme
nl = 2(n 2),
n 2 = (n 2)(n 3)/2,
n-3
_ n-2
Pl [n-3 (n-3)(n-4)/2,'
_
PZ
4
2(n-4)
[2(n-4) (n-4)(n-5)/2]
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 12.5]
Another way of deriving this association scheme is to let one treatment correspond to each of the ordered pairs of integers (x, y), 0 < x <y < n. Then two
treatments are first associates if their representations have an integer in common.
The number pairs are equivalent to the coordinates in the upper triangle of the
array mentioned before. Thus we can associate 1 with (1, 2), 2 with (1, 3), and
so on. Then the first associates of (1, 2) would be (1, 3), (1, 4), (1, 5), (2, 3), (2, 4),
and (2, 5).
i 2 -3i+n
(i 1)(ni+1)
Pl [(i 1)(ni+ 1) (ni)(ni+ 1)]^
_
P2
i . 1)
i(n i)
i(ni) (ni) 2 +(i-2)]^
1 2 3
4 5 6
7 8 9
and obtain the following L 2 design:
123, 456, 789, 147, 258, 369,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 12
g
n1g-1
n 1 g-1 n 2 n 1 +g+1
P1 =
h
nl h
P2 =
n l h n 2 n 1 +h-1
As an example consider the following design for v = 5:
012, 123, 234, 340, 401.
kQh = r(k 1)
S1 ( h ) A2S2(h).
(12.1)
Writing Sl (Q h) and S2 (Q h) for the sums of the Q S for the first and second associates of the hth treatment, we have
kSl(Qh) =
+ S2(){
kS2(Qh) =
i\1Pi1 ^2Pi2},
(12.2)
(12.3)
There are two methods of continuing the analysis. They are given by Rao
(1947a), and by Bose and Shimamoto (1952).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 12.6]
T4 = '2{ T h +
S1(h)
2( fh)} = 0,
where
Al2 = r(k 1) + '2,
B12 = A2 A1,
ArTh
= k{B22Qh B12S1(Qh)}
(12.4)
(We use A, for Rao's A; Bose and Shimamoto use A for a different quantity.)
This gives a solution matrix P with p i; = B 22 kAr 1 and p h; _ kB 12 Ar 1 if h
and i are first associates, Phi = 0 if h and i are second associates.
Hence, V(Th T{) = 2k(B 22 + B 12 )Or lv 2 if h and i are first associates and
V(T h T t ) = 2kB 22 AT 1 Q 2 if h and i are second associates.
EXAMPLE 1. The triangular design given in the previous section has v = b =
10, r = k = 4, A = 1, a 2 = 2, n 1 = 6, and n 2 =3,
P1
= [2 1]'
P2
= [2
0]
V(T1
Y (T1
(12.5)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 12
Consider the linear combination Lh = k2 Q h + c l kS1 (Qh ) + c 2 kS2 (Q h). Substituting from Equations 12.5 and 12.1,
Lh = rk(k 1)fh (c,A l n 1 + c2)2n2)fh + (a11c1 + a21c2 A^k)S^ (fh )
+ (a12 c1 + a22c2 A2k)S2 ( Th ).
(12.6)
= ) 2k +
a 12 c 1 + a22c2,
giving
)1k = (a11 + A1ni)ci + (a 21 +
A2n2)c2.
2n2)c2,
Aln1)(a21
+ A2n2)
tb
4=D=k2Lb.
Substituting for a al and a22 in D l , we obtain
1) '
c1
Ca
or r(k-1)'
It can be
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 12.7]
or c 2 )a 2
2(k c l )a 2 2(k
r(k 1)
r(k 1)
8 = 2c 1 + 16c2 ,
11e 1 + 2e 2 ,
whence
D = 160 b = 180,
V(f l T 2
c l = 4/15,
c2 = 8/15,
28x 2 26a2
V(f 1 Ta) =
) = 45 '
45
Kapadia and Weeks (1964) give an alternate formula for computing the
adjusted sum of squares for treatments in GD designs which provides a check on
the computations.
Then, putting
w1
1 _ k _
= ,
wa
vf
1
+
v kab'
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 12
where
di De(w^b(ww2)2
a and a
from
A ta = 2(n 2),
B22 = n + 2,
A,.=2n 2 .
Then
2nfh = (n + 2)Q h + Sl(Qh)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 12.8]
y2if
n -1 >By ^flQh-
h j
We consider now the combined analysis, incorporating the interblock information. We assume that the block effects /3 are a random sample from a normal
population with mean zero and variance ab, and use Rao's maximum likelihood
method, which was derived in the previous chapter.
To obtain the combined estimates T* we return to the intrablock equations and
substitute Ph , R and A for Q h , r, and ,\ where
Ph = w1Qh + n_ 1 w2(1 nhJBJ GIn)
i
2w 1 + 2w 2 /(n 1),
A = (w 1 w 2 ).
(wl
w2),
B 2 = (n + 2)w 1 + (n 2)w 2 ,
A* = 2n 2 w 1 (w l + w 2 ).
It follows that
Th = [{n(w1 + W2) + 2(w1 W2)}Ph + (Wl W2)Sl(Ph)1I Ar * .
The weights w 1 and w 2 are obtained, as usual, by substituting for a and a their
estimates from the analysis of variance tables. We have a = 2(Eb Ee )In if
the design is considered as being run in separate replications, and a2 = (Eb E )
x (2n 1)n 2 , if no replications term is taken out.
Kempthorne and Federer (1948) have shown that the variance of a difference
between the estimates of two treatments is
V(Th T*) =
(n + 1) w1 + (n l)w2 a 2
nw1 (w1 + w2 )
V(- *) _
h
(n
+ 2)w 1 + (n 2)w 2 a2
nw 1 (w l + w2)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 12
2(w1
w2)
(n + 1)(w 1 + w2 )
whence it is argued that the lattice design is more efficient than the randomized
complete block design with the same experimental material.
y, f =m+g,+g5 + si +e15 ,
where g{ and gi are the general combining abilities of the ith and jth lines, and
si , is the specific combining ability; we assume that g,, s15 , and e11 are independently (normally) distributed with zero means and variances a9, as, and ag.
The objectives of the experiment are to obtain estimates of the parameters g, and
the components of variance ag, a$, and a.
We estimate the g, by minimizing the sum of squares
m gc gg) ,
with the side condition 2 g, = 0. Then m = G/N = 2G/rv where G is the grand
S= (Yir
total of all the observations, N = rv/2 is the number of crosses and r = n a , and
Ti = rm + rr
+ S (g ),
2
where Ti is the total of the responses on the crosses containing the ith line, and
S 2 (fr) is the sum 1 g! over all lines crossed with the ith line.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 12.9]
where g is the average of the general combining abilities of the lines used in the
experiment. It follows that g i is replaced by g i g, and
Source
d.f.
EMS
Total
General combining ability
(nrv 2)12
v 1
v(r 2)/2
a + no;
Error
(n 1)rv/2
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 12
p=r(2rv+ l),
s=r 2 (2rv).
If, however, there are only two groups, r = v/2 so that s = 0, and the design is
singular. On the other hand, if, instead of crossing each line with its second
associates, we cross it with its first associates, we have
Q, = (n 1 )S, + S1(Si),
S1(Q1) = (n l)gi
+ ( 2n 3 )S1(Si),
so that
or 3 281 = 2 Qi S2(Q1),
= (p r)Q1 rS2(Qi),
Ti
Q,
32,
k,
537
1.6
19.4
0.606
Line
Tt
Q,
32k,
g,
558
22.6
31.4
0.981
2
515
20.4
18.6
0.581
555
19.6
17.4
0.544
538
2.6
4.6
0.144
547
11.6
24.4
0.762
10
514
21.4
17.6
0.550
511
24.4
31.6
0.987
567
31.6
19.4
0.606
512
23.4
39.6
1.237
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 12.10]
In the analysis of variance the correction for the mean was GIJ120 = 59719.408.
The uncorrected sum of squares for crosses was 59870.375, and the uncorrected
sum of squares for individuals y 2 (not shown in the data summary) was 60,171.
The point estimates of the components of variance were
Q = 2.863,
&9 = 0.597.
&s = 0.036,
d.f.
SS
ms
EMS
119
14
9
5
105
451.592
150.967
138.112
12.855
300.625
15.346
2.571
2.863
a + 8a$ + 21.3309
ae + Bos
o
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 12
with E = 0.8942. The other two designs have r = 6. They are each formed by
cycling on two initial blocks and discarding duplicate blocks. The first of these
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 267
designs is formed from (0, 1, 2, 3) and (0, 1, 3, 4). It has three associate classes
and E = 0.8977. The last design is formed from (0, 1, 2, 3) and (0, 1, 3, 4) and
has E = 0.8978. The upper bound is Eo = 0.9000.
John lists nineteen designs for v = 12 and k = 4. They are all partially
balanced, although two of them have no fewer than six associate classes. Their
efficiencies range from 0.8007 to 0.8166. The value of E, is 0.8182. Two of the
designs are GD designs. The first has r = 4, E = 0.8138, and initial block
(0, 1, 3, 7). The second has r = 10, E = 0.8166, and three initial blocks
(0, 1, 2, 5), (0, 1, 3, 8), and (0, 2, 6, 8). There is no advantage in using the more
complicated association schemes.
In summary, three guidelines are suggested. Take k as large as you reasonably
can. Try to find a design with as much balance as possible. The third guideline
is to choose, subject to the other considerations, the simplest design possible.
This is sound advice in the design of any experiment. Keep it as simple as you
can.
Exercises
1. Prove that a sufficient condition for a PBIB(2) scheme to be group divisible is that
either pis = 0 or piz = 0.
2. Show that A,. = k 20 6.
3. Derive the constant d l in the BoseShimamoto form of the combined intrablock
and interblock estimates.
4. Prove that for a GD design the methods of Yates and Rao give the same combined estimates for comparing first associates.
5. Show that for the simple lattice the methods of Yates and Rao do not give the
same combined estimates.
6. Derive the formula given for V(Th - T *) in the simple lattice.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
13
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
each consisting of k plots; v treatments, or varieties (v > k), are assigned to the
plots (one treatment to each plot) in such a way that
(i) Each treatment appears exactly r times;
(ii) No treatment appears more than once in any block (a design with this
property is called a binary design);
(iii) Each pair of treatments appears together in exactly A blocks.
The five parameters b, v, r, k, ) are not independent. They satisfy the conditions:
(a) bk = rv = N, which is the total number of plots;
(b) A = r(k 1)/(v 1), which is an integer;
(c) b >_ v.
The inequality was proved by Fisher (1940), and is called Fisher's inequality.
It was derived in Chapter 11, and the derivation is repeated here.
The 1938 edition of the Fisher and Yates tables contained a list of all sets of
parameters satisfying conditions (a) and (b) with r < 10 for which designs were
known to exist, in which case the design was given, and those for which it was
not yet known whether or not designs existed. Bose (1939) solved all the unknown cases in the listing except for twelve. Later workers have reduced the
number of unsolved cases in his list to two. The two open cases are b = 69,
v = 46, r = 9, k = 6, A = 1, and b = 85, v = 51, r = 10, k = 6, A = l; it is
still not known whether designs exist in these cases. Rao (1961) published a list
of all sets of parameters with 11 < r < 15, satisfying conditions (a) and (b),
together with known solutions, and Sprott (1962) did the same for 16 < r < 20.
Bose's 1939 paper is the major work in the field, and we shall draw heavily
upon it in this chapter.
Associated with any incomplete block design is its incidence matrix N = (n 1 ).
N is a matrix of v rows and b columns, and n, f is the number of times that the ith
variety appears in thejth block. For a BIBD, the elements of N are either zero or
one, and NN' = (r ,1)I + AJ where J is the square matrix of order v, each
element of which is unity.
The determinant NN' = (r A)" - '(r + (v 1)A) = (r )' _'rk, which is
positive since A < r.
Thus the rank of NN' is r(NN') = r(N) = v; but r(N) < min (b, v), and so
b > v.
If b = v and r = k the design is said to be symmetric. For such a design N is a
square matrix and INN'I = 1N1 2 . This implies that (r ))v -1 is a square.
Hence, if v is even, a necessary condition for the existence of a symmetric design
is that (r )) is a perfect square. This nonexistence theorem was derived
independently by Schutzenberger (1949), Shrikhande (1950), and Chowla and
Ryser (1950). It shows that conditions (a), (b), and (c) are not sufficient for the
existence of a design. Consider, for example, the case b = v = 22 and r = k =
7; we have A = 2, and so r ^1 = 5, and no such design exists.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 13
The simplest series of balanced incomplete block designs are the unreduced
designs; these are the designs that consist of all possible combinations of k
out of the v varieties. For these designs
b=() r=() A (k 2).
It is not necessary to investigate cases for which 2k > v. If a new design of b
blocks and v varieties is formed by assigning to each block those varieties that
do not appear in the corresponding block of the BIBD, the new design is also
a BIBD; it is called the complementary design.
1 2 3 4
5 6 7 8
9101112
13 14 15 16
15 913
261014
371115
481216
161116
251215
38 914
47 10 13
171214
281113
351016
46 915
181015
27 916
361213
451114.
To show that the design is a BIBD, we note that any pair of varieties cannot
appear together in more than one block. If they appear in the same block of the
first set, they cannot appear in the same row of the second set, and vice versa;
in neither case can they appear in the same block in one of the subsequent sets,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 13.2]
for that would imply that the same letter appeared twice in the same row (or
column) of a Latin square. Similarly, if a pair of varieties appears together in a
block of the (i + 2)th set and also in a block of the (h + 2)th set, that contradicts the fact that the ith and hth squares are orthogonal. However, each variety
appears r = s + 1 times, once in each set, and thus its plots appear in the same
blocks as r(k 1) = s 2 1 plots occupied by other varieties; if no variety is
to appear more than once, these 2 1 plots must be taken up by each of the
other varieties appearing once each, and the design is a BIBD with A = 1.
Conversely, the existence of a BIBD with parameters b = s(s + 1), v = s 2 ,
r = s + 1, k = s, and A = 1 implies the existence of a set of s 1 orthogonal
squares of side s. This establishes the nonexistence of a design with b = 42,
v = 36, r = 7, k = 6, and A = 1 since there is not a complete set of Latin
squares of side six.
To each member of the first series, OSI, there corresponds a member of the
second series, 0S2. These are designs for v = S 2 + s + 1 varieties. To each
block of the ith set of the OS1 design an extra plot is added containing the
(s 2 + i)th variety. One extra block is added, consisting of one plot with each of
the new varieties. The resulting design is a BIBD with b = v = s 2 + s + 1,
r = k = s + 1, and A = 1. There is no such design for forty-three varieties.
The designs of the first series are also called balanced lattices; any two of the
replicate sets constitute a simple lattice.
sN+1
S
lines, and each pair of points appears on one and only one line.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 13
If we now let the points represent varieties and the lines represent blocks, the
system of points and lines gives a BIBD with
S N+1 1
v s-1
(SN+1 1)( S N 1)
b=l (s2-1)
k=s+1, a=1.
-1) '
(s"
D (N, m, s)
1)(SN 1).
1). ..
.. (SN-m+l 1)
1) l. .. (S 1)
(Sm+1 1)(Sm
1)(S m 1) ... (s 1)
(SN+1
1)
1)
^(N 1, m 1, s)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 13.2]
We may now identify points with varieties and subspaces with blocks to
obtain BIB designs with parameters
/ S N+1
v = I
_1
, s-1
=(
) _ '(N, 0, s);
b= t(N, m, s);
sm+l _ 1 \
I = ^(m,0,2);
s1
/
A = O(N 2, m 2, s),
1. 0001
7. 0111
13. 1101
2. 0010
8. 1000
14. 1110
3. 0011
9. 1001
15. 1111.
4. 0100
10. 1010
5. 0101
11. 1011
6. 0110
12. 1100
For m = 2, each flat is defined by a single equation and the design bas b = v = 15,
r = k = 7, and i\ = 3. The blocks are
xa - 0
123 4 5 6 7,
x 1 -0 123 8 9 10 11,
x2 = 0
145 8 91213,
x 3 =_ 0 246 8101214,
x o +x 1 =0
x o +x 2 -0
x0+xg- 0
x 1 +x 2 =0
x 1 +x 3 -0
x2 + x3 0
x o +x l +x2 -0
x0 + x1 + x3 0
xo + x2 + x3 = 0
xl + x2 + x3 - 0
x o +x 1 +x 2 +x 3 -0
1 2 3 12 13 14 15,
1 4 5 10 1114 15,
246 9 11 13 15,
167 8 91415,
257 8101315,
347 8111215,
1 6 7 10 1112 13,
257 911 1214,
347 9101314,
356 8111314,
356 9101215.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 13
The PG(2, s) designs with m = 1 are the 0S2 series with v = s 2 + s + 1 and
A = 1. Other PG designs of interest are
PG(4,2) v=31
m=1 k=3
m=2 k=7
b=155 r=15
A=1,
b=155
)=7,
r=35
r=15 )=7,
.1 = '(N-2,m-2, ).
m=1 k=2
m=2 k=4
b=28
b=14
r=7
r=7
A=3,
b=120
r=15
.1=1,
.1=1,
r=15
,1=7,
r=31
A=15,
r=13 A=4,
b=39
A=1,
A=5.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 13.4]
275
...,
0, 1, 3; 1, 2, 4; 2, 3, 5; 3,4,6; 4, 5, 0; 5, 6, 1; 6, 0, 2.
The complementary design with k = 4 and A = 2 is generated in a similar way
from the initial block (0, 2, 3, 4).
A difference set for v = 15 and k = 7 can be obtained by representing each
treatment by a pair of integers (x, y), x = 0, 1, 2, 3, 4, y = 0, 1, 2. Addition is
defined by (x 1 , y l ) + (x 2 , Y 2) = (x 1 + x2 , y l + y2 ) with x l + x 2 reduced mod 5,
and y l + Y2 reduced mod 3. The design is
00, 10, 40, 01, 21, 31, 02; 01,11,41,02,22,32,00; 02, 12, 42, 00, 20, 30, 01;
10,20,00, 11, 31,41, 12; 11, 21, 01, 12, 32, 42, 10; 12, 22, 02, 10, 30, 40, 11;
20, 30, 10,21,41,01,22; 21, 31, 11,22,42,02,20; 22, 32, 12, 20, 40, 00, 21;
30, 40, 20, 31, 01, 11, 32; 31, 41, 21, 32, 02, 12, 30; 32,42,22,30,00,10,31;
40,00,30,41,11,21,42; 41, 01, 31, 42, 12, 22, 40; 42, 02, 32, 40, 10, 20, 41.
If v is a power of a prime, we may use the Galois field GF(v) in a manner
similar to the double modulus system just mentioned. For example, if v = 16
and k = 6 the treatments are represented by elements of the form a o + a l x +
a2x 2 + a 3 x 3 where the coefficients a; are either zero or one. Arithmetic is carried
out mod 2. The representations of the treatments can be abbreviated to the
4-tuples a 1 a2 a3 a4 . The initial block is 0000, 0001, 1000, 1111, 0101, 0011.
We shall see later that the use of difference sets may be extended to include
designs involving several initial blocks. If there are t initial blocks, the design
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 13
will have b = tv, and r = tk. We shall discuss Bose's two methods of using
differente sets and his two fundamental theorems. After that we shall present
some of the series of difference sets that have been discovered. Before proceeding
to Bose's theorems, we shall mention two theorems about the symmetrie
designs.
We have already discussed condition (i). Conditions (ii) and (iii) may be
combined into the single statement that a necessary condition for the design to
exist when v is odd is that the Diophantine equation
x2 = (k A)y2 + (- 1)cv_ 2Az2
shall have a solution in integers other than the trivial solution x = y = z = 0.
The following examples illustrate the use of the theorem. The square-free
part of k A is the part remaining when all square factors have been removed.
Thus the square free part of 12 is 12/2 2 = 3.
If v = 29, k = 8, and A = 2, we have v - 1 (mod 4), k ,1 = 6. Taking
p = 3, we note that 1 2 = 1, 2 2 = 1 (mod 3). Hence, A = 2 is not a square, so
that (Alp) = 1, and the design does not exist.
If v = 67, k = 12, and ,1 = 2, we have v= 3 (mod 4), k 1 = 10, and
p) = (315) = 1, and the design does not exist.
p = 5. Then () p)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 13.6]
Theorem 2. Hall and Ryser (1951). Let v be odd and let e be any positive divisor
of v. A necessary condition for the existence of a symmetric design with parameters
v, k, and A, which is cyclic, is that the Diophantine equation
x 2 = (k A)y 2 + (- 1)(e- 1)12eZ2
must possess a solution in integers that are not all zero.
Smith and Hartley (1948) showed that if, for any design with v = b and r = k
(whether balanced or not), we write the design as a rectangular array of v rows
and k columns with blocks as rows, it is possible to arrange the treatments
within the rows in such a way that each treatment appears exactly once in each
column. Such an arrangement is called a Youden square; in the analysis, a sum
of squares can be taken for differences between columns if desired.
It does not follow, however, that every symmetric design is a cyclic design, or
is isomorphic to one in t1 e sense that it could be made cyclic by a suitable
relabeling of the treatments. Bhattacharya (1944b) has obtained a symmetric
BIBD for v = 25, k = 9, and A = 3.
Bhattacharya's design is the following:
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 13
Consider now a set of t blocks satisfying the following conditions, where m1,
denotes the value of m f in the sth block:
(i) For each j the set of , m ;s (m ;s - 1) pure differences [j, j] contains each
nonzero element of G exactly 2 times;
(ii) For each pair j, j'(j j') the set of 1 s m;sm ; . s mixed differences [j, j']
contains each element of G, including zero, exactly A times.
We say that in these t blocks the differences are symmetrically repeated.
For example, if G is the set of residue classes mod 5, and n = 2, the following
set of t = 6 blocks has the property with A = 2: 0 2 , 1 2 , 2 2 ; 1 1 , 4, 0 2 ; 2, 3 1 , 0 2 ;
11, 4, 22; 2^, 3 , 22; 01, 02, 2 2.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 13.6]
Suppose further that these t blocks are used as initial blocks in the following
manner. From each initial block B, a set of m blocks is generated. If v h; is a
treatment in B 3 , and Xg = Xh + x t , thn v 9j appears in B P ; the block B 30 is the
initial block B.
The theorem states that the resulting set of mt blocks forms a balanced incomplete block design with v = mn, b = mt, r, k, A.
Let Vhj be a treatment in B3 . The images of Vhj in the set of blocks B8
consist of all treatments v l , belonging to the jth class. Thus each treatment vif
appears in the design exactly once for each appearance of j in the initial blocks.
Hence, by virtue of condition (ii), each treatment v t5 , i = 0, 1, ..., m - 1,
j = 1, 2, ..., n, appears exactly r times in the set of mt blocks.
Consider two treatments: v ij and vt . ; ., j j'. They appear together in a block'
B39 if, and only if, we can find two treatments v, ti5 and v h ; in B, and an element
X g in G such that X h + x 9 = x j and X h ' + X g = x i .. Subtracting, we have the
equivalent condition Xh - xh , = x, - xj . This implies that the pair v, 1 vi . ; . occurs
in exactly one of the blocks generated by B, whenever i - i' is one of the
differences [j, j'] in that block. However, the difference i - i' occurs exactly A
times among the set of differences [j, j'] in all t blocks, and so the pair of treatments vt , v n ', occurs together in exactly ) blocks of the design. A similar
argument involving the nonzero differences [j, j] shows that the pair v;5 , v l f also
occurs together exactly A times. Thus the design is a balanced incomplete block
design with the required parameters, and the theorem is proved. E
It should be noted that the requirement that each of the initial blocks should
contain exactly k plots has not been used. Even if the blocks are of different
sizes, the resulting design, though not a BIBD, is stilt equireplicate, and each
pair of treatments appears in the same block exactly ,1 times.
PROOF.
1 1, 4 1, 2 2; 21,3 1 ,2 2 ; 01,0 2 ,2 2 ;
2 1, 01, 3 2; 31, 4 1, 3 2; 11, 1 2, 3 2;
3 1, 1 1, 4 2; 4 1, 0 1, 42; 2 1, 2 2, 42;
4 1, 2 1, 0 2; 0 1, 1 1, 0 2; 31, 32, 02;
0 1, 31, 1 2; li, 2 1, 1 2; 41, 42, 1 2.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 13
(i) Each block contains k plots; each block B 3 contains k of the mn treatments
vij , each block B* contains oo and k 1 of the other treatments;
(ii) Among the kt treatments in the blocks Bs , exactly (mu A) treatments
belong to each class and among the u(k 1) treatments other than o0
occurring in the blocks B*, exactly A belong to each class. (This implies
that kt = n(mu A) and (k 1)u = n.k.);
(iii) The differences obtained Erom the t + u blocks, ignoring oo, are symmetrically repeated.
From each of the initial blocks B $ we generate a set of m blocks in the same
manner as in Theorem 1. From each of the initial blocks B$ we generate a set of
m blocks by the same procedure, except that oo does not change as we go from
block to block.
The theorem states that the resulting set of m(t + u) blocks is a balanced incomplete block design with parameters v = mn + 1, r = mu, k, and A.
The proof follows the same lines as the proof of the first fundamental theorem
(Theorem 1) and will not be given.
EXAMPLE 4. Let G be the set of residue classes mod 11. The following three
initial blocks generate a BIBD with v = 12, b = 33, r = 11, k = 4, and A = 3;
0, 1,3,7; 0, 1,3,9; 00,0, 1,5.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 13.7]
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 13
exactly three treatments in common; with two of the blocks already having four
treatments in common, this is clearly impossible. Bhattacharya's design for
v = 16 was first given in reference (1944a). He repeated it (1944b), together with
the symmetric design for v = 25 and k = 9 mentioned earlier and a second
design for v = 16 obtainable by block section from it.
Bhattacharya's design for v = 16, b = 24, r = 9, k = 6, and A = 3 is
ABGHNO
CEHILN
ADEMNP DFHIKO
BDHJLN ABCKLO
ABCDEF**
DEGILO
CDGJLP
CEGHKM
BEFKLP
EFHJOP
BDIJKM
AFGILM*
AEIJKN
BFGINP
ADGHKP AFHJLM*
CDFMNO CFGJKN
BCHIMP BEGJMO
ACIJOP
KLMNOP**.
The two blocks marked with a single asterisk have four treatments in common;
the two blocks marked with two asterisks have no treatments in common; the
other blocks all have two treatments in common.
The method of block intersection is of less interest. It consists of omitting one
of the blocks completely and retaining in the other blocks only those treatments
that occur in the omitted block. This leads to a balanced incomplete block design
with v* = k, b* = v 1, r* = k 1, k* _ A, and A* = 1. For example,
we may take the symmetric design for nineteen treatments in blocks of nine
plots and obtain from it by block intersection a design for v = 9, b = 18, r = 8,
k = 4, and A =3.
15
22
21
29
16
25
.1
21 7
22 7
28 8
29 8
24 9
25 9
5
7
6
8
6
9
2
2
2
2
3
3
Reference
Number v
(24)
(26)
(27)
(28)
(30)
(31)
46 69
21 30
31 31
36 45
46 46
51 85
k ,1
9
10
10
10
10
10
6 1
7 3
10 3
8 2
10 2
6
1
Since that time ten of the cases have been settled and only two, numbers (24)
and (31), remain unsolved. We have already mentioned Bhattacharya's solutions
to (17) and (20). In 1946 he obtained a solution to (27), and, hence, by block
section, to (26). The impossibility of the symmetric designs (10) and (30) follows
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 13.9]
from the fact that v is even and r A is not a square. The symmetric design (14)
was shown to be impossible as the example following our presentation of the
theorem of Chowla and Ryser (1950). The impossibility of (8), (12), and (28)
then follows directly from the result of Halt and Connor (1953) because their
existence would imply the existence of (10), (14), and (30) respectively. The nonexistence of (8) was established by Nandi (1945). An interesting alternate
derivation of the nonexistence of (8) and (28) is given by Atiqullah (1958).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 13
{13, 2t3, 01} ... {i3, (2t + 1 - i)3, 01} ... {t3, (t + 1 )3,
0 l},
{01, 02, 0 3 }.
v=9,
r=4,
k=3,
,1= 1,
t=2,
k=3,
A=1,
t=3,
v=21,
k=3,
%=1.
b=12,
b =70,
r=10,
The design for t = 1 follows. The four blocks in the first row are the initial
blocks.
{11 2 1 0 2} {1 2 22 0 3 ) {132301} {00 3 03}
{2 1 0 1 1 2 } {2 2 02 1 3 } {2 3 03 1 1 } {1 1 1 2 1 3 }
{0 1 1 1 2 2 } {0 2 1 2 2 3 } {0 3 1 3 2 1 } {2 1 2 2 2 3 }.
,1
tk+1
tk
k-1
B
C
D
2t(2A + 1) + 1
2t(2^1 - 1) + 1
4t(4A + 1) + 1
2A+1 t(2+1) A
2A
2tA
,1
4^1 + 1 t(4^1 + 1) A.
xi+t xi+2t
xi
it+2t
x,x
0, x i
x2
xi+4A-1)t.
x i+2t
x21+16At
x 2i+8t
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 13.9]
i + ut = i' + u't
(mod kt),
(u u')t
(mod kt),
so that
and
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 13
+ 2) 4 2 2t + 1 = p", t >- 2,
5 2 2t+1=p", t>-2,
4(3t + 2) 4 3 12t + 7 =pa
p 1 2(3t
fla 10t + 5
y
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 287
series 4 design, and it has the additional property that all triples of treatments
occur the same number of times. The design with A = 3 has v = 8, b = 14,
r = 7, and k = 4. It is
cc
x11,
x{+ 3
x{ +2k-3)
= 0 1.
The doubly balanced designs of Calvin (1954) are special cases of these series.
Exercises
1. Show that the complement of a BIBD is also a BIBD.
2. Show that the existence of a design with v = n 2 , k = n, and A = 1 implies the
existence of a complete set of orthogonal Latin squares of side n. Hence there
exists no design with v = 36, k = 6, and ,1 = 1.
3. Show that the equation
x2
= 6y 2 + 5z 2
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
14
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
O j = (rk 9 t )^k
is a root of A with the same multiplicity a { . For every connected design NN' has a
root 0 = rk with a o = 1. It is only meaningful to talk about efficiency for
connected designs, in which case
E= (v 1)I(r ajoi 1).
The largest value of E that can be hoped for with v varieties in blocks of size k
is
E = (dv)/(rk)
where it(v 1) = r(k 1), i.e.,
v(k-1)
vk
.
-1
Emax =
k(v-1)
k(v 1)
For any design the parameters r, k, n i , and ,1, must satisfy the equation
r(k 1) _
,li nt .
Furthermore, since NN' is a nonnegative definite matrix, its roots 0 must all be
nonnegative. We shall see in Chapter 15 that for a PBIB(m) design there are,
other than the simple root 0 = rk, only m distinct roots 9 ; ; their values and the
values of the multiplicities a are readily obtained by the methods to be given in
that chapter. This provides us with a convenient method of establishing the
nonexistence of designs with some sets of parameters. In addition, for a
symmetric design the determinant INN'1 is a square and so rk0i10z2... is a
square. Thus, for example, if all the roots are positive and if is even for all
i, i > 1, but a l is odd, then 0 must be a perfect square. This is, of course, an
extension of the method that we used earlier to show that in a symmetric balanced
incomplete block design with v even, (r a) must be a square.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
_ k(br)
e b-1
and the multiplicity of 0 is a = b 1.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 14.2]
Shrikhande (1952) gave two cases in which the duals of balanced incomplete
block designs are PBIB(2) designs. The first is the dual of a balanced incomplete
block design with parameters
v*=rkk+l,
r*=k,
A*=1.
v=k(krk+ 1)/r,
k*=r,
n 1 = r(k 1),
b=rkk+ 1,
r,k,
A l = 1, d 2 = 0.
[ (k2)+(r-1)Z
P
l
(r
1)(k
r)
(r-1)(kr)
_r 2 r(kr 1)
P ^ [r(kr 1) n 2 r(kr 1) 1,
This is called the singly linked block (SLB) association scheme [Bose (1963)].
If we take the balanced design with v* = 9, b* = 12, r * = 4, k* = 3, and
d* = 1 used in Chapter 11 and number the blocks 1 through 12, the dual is the
design
The second case is the triangular doubly linked block design, which is
discussed later in this chapter.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
a 0 =1;
a1 = m 1;
02 =rA l
a2=m(n-1)
The latent roots and their multiplicities will be obtained more easily later. For
binary designs we cannot have A l > r, and so the condition 0 2 >_ 0 is trivial.
However, the condition 0 >_ 0 can be used to establish the nonexistence of
some designs, as the following example shows.
Let m = 6 and n = 4. The condition r(k 1) = l { n i A becomes
r(k 1) = (n 1).\ + n(m 1)A 2 .
A design with A l = 0, A 2 = 11, r = 20, and k = 12 would satisfy this requirement and also the requirement that b be an integer. However, 0 = 20 44 =
24, and so no such design exists.
For symmetric designs, we note that the determinant
!NN I = r 2(r l v2) m -1 (r 1) m(7-1)
'
must be a perfect square. If neither 0 nor 0 2 is zero, the following conditions are
necessary:
(i) If m is odd and n is even, then r ,1 1 must be a square;
(ii) If m is even, then r 2 v )t2 is a square.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 14.5]
Thus, for example, condition (i) rules out the design for v = b = 22, r = k = 5,
m = 11, n = 2, t = 0, and A 2 = 1; condition (ii) rules out v = b = 44,
r = k = 7, m = 22, n = 2, A, = 0, and A 2 = 1. Bose and Connor (1952) have
extended these results, using the HasseMinkowski invariant. Bose and Connor
(1952) divided the GD designs into three classes which are mutually exclusive:
(i) Singular designs, which are designs for which 0 2 = 0, i.e., r
(ii) Semiregular designs which have 0 1 = 0, 6 2 > 0;
(iii) Regular designs which have 9 1 > 0, 0 2 > 0.
= al ;
If both 0 and 0 2 are zero, we have the complete block design with b = r and
k = v.
Al.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
Sufficiency: Consider a variety in the jth group. It appears r times, and on each
occasion there are, in the same block, c varieties from the hth group, (h 0 j).
Then
rc = Zn.
We also have k = cm so that
rk=rcm=mn
=A2 v,
Necessity: Suppose that the design is semiregular and that the jth block conef = nr.
tains ef varieties belonging to the first group. Then
The jth block contains (2) pairs of varieties from the first group. Each of
these pairs of varieties occurs together in A l blocks, and so
6
2 2
b>v+r-1
for resolvable balanced incomplete block designs, he called affine resolvable
those designs for which the equality b = v + r 1 held. He showed that for an
affine resolvable design with v = nk, each block in a given replication has exactly
k/n varieties in common with each of the blocks in every other replication; kin is
an integer.
It follows that the dual of an affine resolvable balanced incomplete block
design is a semiregular GD design. When we take the dual, blocks that were in
the same replication become varieties in the same group, and, since the blocks in
any replication are disjoint, we have A l = 0. Since blocks in different replications
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 14.6]
become varieties in different groups, it follows from the property of affine resolvable designs just mentioned that A 2 = kin. We summarize this in the following
statement. Let D be an affine resolvable balanced incomplete block design with
parameters
r* = m,
v* = nk*,
k*,
A*;
v = mn,
a1
r = k*,
k = m (c = 1),
A 2 =kin.
=0,
The duals of the designs in Yates' orthogonal series OS1 are semiregular
designs with parameters
v=sa+s,
b=s 2 ,
m=s+1,
n=s,
r=s,
k=s+1,
A=0, A 2 =1.
v=ps,
b=s 2 ,
k=p,
m=p,
n=s,
A l =0,
A.=1.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
r = r 1 b 2 + (m 1)r2b 1 ,
A l = ( m 1)b 1 r2
+ b 2 Ai,
k = k l + nk 2 ,
A2 = ( m 2)b 1 A 2
+ 2r1 r2 .
Suppose, for example, that there are twelve varieties divided into three groups
offour:A,B,C,D; E, F, G, H; I, J, K, L.
EXAMPLE 1. The E'S(2) design is
CEFGHIJKL,
AEFGHIJKL, BEFGHIJKL,
DEFGHIJKL,
ABCDEIJKL, ABCDFIJKL,
ABCDGIJKL, ABCDHIJKL,
ABCDEFGHI, ABCDEFGHJ, ABCDEFGHK, ABCDEFGHL.
r =k =9,
v =b =12,
A l =8,
,12 =6.
EXAMPLE 2. Take for the incomplete group blocks from the balanced design:
12, 13, 14, 23, 24, 34. Augment each block with the varieties in the remaining
two groups. This gives
AB EFGH IJKL, AC EFGH IJKL, AD EFGH IJKL,
BC EFGH IJKL, BD EFGH IJKL, CD EFGH IJKL,
ABCD EF IJKL, ABCD EG IJKL, ABCD FG IJKL, and so on.
b = 18,
k = 10,
r = 15,
A l = 13,
a2 = 12.
B IJKL,
F ABCD,
J EFGH,
B EFGH,
F IJKL,
J ABCD,
C IJKL,
G ABCD,
K EFGH,
C EFGH,
G IJKL,
K ABCD,
D IJKL,
H ABCD,
L EFGH,
D EFGH,
H IJKL,
L ABCD.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 14.6]
which is partially balanced. Indeed, whenever m is odd such half designs are
available. They are obtained by taking, for example, those blocks in which the
hth group is complete and the (h + 1)th group is incomplete, and omitting the
corresponding blocks in which the (h + 1)th group is complete and the hth
group is incomplete (h + 1 being reduced mod m).
In analogous fashion, designs may be obtained in which each block consists
of a subset from each of two or more groups, the subsets again being chosen as
blocks of balanced designs with v = m. Thus, with six varieties in two groups
A, B, C; D, E, F, we may take all possible pairs from the first group with each
member of the second group, and vice versa, to obtain a design with b = 18.
k = 3, A 1 = 3, and A2 =4:
ABD,
BCD,
ADF,
ABE,
BCE,
BDF,
ABF,
BCF,
CDF,
ACD,
ADE,
AEF,
ACE,
BDE,
BEF,
ACF,
CDE,
CEF.
Again, fractional designs exist. The complete design for m = n = 3, with each
block containing two treatments from one group and one from another, calls
for fifty-four blocks. There is a partially balanced half design with v = 9,
b = 27, k = 3, r = 9, A l = 3, and A 2 = 2. For m = n = 4, with each block
containing two varieties from one group and one from another, 288 blocks are
needed for the complete design, but there is a one-sixth fraction with v = 16,
b = 48,k = 3,r = 9, A l = 2,andA 2 = 1.
Freeman (1957) also discusses variations of these methods in which v = 2n 2
varieties are split into m = 2n groups, and the groups are divided into two sets
of n groups each. Designs can then be found with k = 2n, b = n(3n 1),
r = ( 3n 1), A l = 2n 1, and A 2 = 2. It is necessary that there exist (n 1)
orthogonal Latin squares of side n. There are two types of block in the design.
The first n(n 1) blocks consist of all possible pairs of groups from the same
set. The remaining 2n 2 blocks each consist of a group from one set and a single
variety from each group of the other set; each group appears complete in n of
these blocks, and the assignment of the varieties from the other set uses the
orthogonal Latin squares.
The design for n = 2 has v = 8, b = 10,k=4,r=5,1 1 =3, and ,1 2 =2.
If the groups are A, B; C, D; E, F; G, H, we have
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
design obtained by repeating the balanced design s times and then repeating the
disconnected design t times is a regular GD design with parameters
v=mn,
b=b*s+mt,
Al = A * s + t,
k=n,
2 =
r=r*s+t,
*s.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 14.6]
v=
rn
v+v'=v +r,
=m+m
'
b=b+b',
n = n,
P=r,
nl = A1,
kC=k+1,
"2 =
1.
(i) The n(n 1) differences (reduced mod m) arisingErom G are all different,
and
(ii) Among the k(k 1)t differences occurring in the initial blocks, each
differente occurs t 2 times, except those that arise in G, which each occur ,1 1
times.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
1 1 2 1 4 1 02,
5161 1 1 42,
12 2 2 4 2 0 1,
5 2 62 12 4 1,
2 1 3 1 5 1 1 2,
6 1 0 1 2 1 52,
2 2 3 2 52 1 1,
6 2 02 22 5 1,
31 4 1 6 1 2 2,
0 1 1 1 3 1 62 ,
32 4 2 6 2 2 1,
02 1 2 3 2 6 1.
41 5 1 0 1 3 2,
4 2 5 2 02 31,
347 9,
45810,
56911,
67100,
78111,
89 02,
91013,
101124,
11 035.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 14.71
B1 =r+(n-4)A,(n-3)A 2 ,
9
=r-2A 1 +
A2, a 2
a1
=n 1;
= n(n 3)/2.
Connor (1958) showed that for n >_ 9 the triangular scheme is unique in the
lense that if a PBIB(2) scheme has the values just given for the parameters of the
first kind, then it must be a triangular scheme. Shrikhande (1959a) proved
uniqueness for n < 6. Hoffman (1960) showed that the scheme was unique for
n = 7 but not for n = 8. Chang (1959) also showed that the scheme was not
unique for n = 8 and later (1960) showed that for the parameters v = 28,
n l = 12, n2 = 15, pi l = 4, and so on, there are exactly three schemes possible in
addition to the triangular scheme.
Chang et al. (1965) found that there are exactly 225 combinations of values,
all integers, of n, r, k, A l , and A 2i with r < 10 and k < 10, satisfying the following necessary conditions:
b = rv/k is an integer,
2v = n(n 1),
2rb<
2.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
provide designs for twenty-one more combinations and show that no designs
exist in a hundred and ten other cases. Eighteen remain unsolved: their parameters are given in Table 14.1. Number 7 has been solved by K. R. Aggarwal.
See Ann. Math. Statist. (1972), 43, p. 371.
TABLE 14.1
Reference
Number
1
,11
,la
15
9
10
27
3
2
10
42
1
3
3
1
3
4
21
6
7
8
9
10
11
12
30
21
8
10
28
35
1
3
10
30
4
2
10
10
21
4
5
4
1
5
13
36
63
14
10
45
7
9
63
45
1
2
5
10
9
10
99
55
99
15
16
11
55
17
12
18
66
b*=n(n-1)J2,
r*=n-1,
A*,
k*=2,
r =2,
k=n-1,
a 1 =1,
I'2
=0.
This design is a special case of the first of the two dual methods given
by Shrikhande (1952). Each block is one of the rows of the array in the
association scheme. These are called the triangular singly linked blocked
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 14.7]
1)
(fl
;=
b* = (n)
2,
r*
= n,
k*=n
-2,
,1*=2.
=( n)
)L 2
=2.
rk vA l = n(r A l ) 12,
which is true for the doubly linked block designs, then 2k is divisible by n
and every block of the design contains exactly 2k/n treatments from each
of the n rows of the scheme. This result is analogous to the similar result
for semiregular GD designs and the proof follows the same lines.
The complement of the design of method (ii) for n = 6 is a linked block
design of triangular type with v = 15, b = 10, r = 6, k = 9, n l = 8,
n 2 = 6, A l = 3, and ' 2 = 4; each block contains three treatments from
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
each row of the scheme. It is the dual of the balanced design with
parameters
v* = 10,
b* = 15,
r*
= 9 = n(n - 3)/2,
156,
157,
167,
567,
258,
259,
289,
589,
368,
360,
380,
680,
479,
470,
490,
790.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 14.9]
appears in that row and in the same column as the second member. Thus,
in the case n = 5 the blocks would be
125,
340,
136,
568,
147,
579,
238,
670,
249,
890.
r-21 1 +A 2 >_0.
=-
1).
I NNI = r20n-102(n-3)12
be a square. If neither 0 nor 0 2 is zero, it follows that
(i) If n = 4t, 0 must be a square;
(ii) If n = 4t + 1, 0 2 must be a square;
(iii) If n = 4t +2, 0 1 0 2 must be a square.
Examples of designs that are found to be nonexistent by these criteria are
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
k=6,
r=9,
X1 1 =2,
A 2 =1,
v=36,
v=36,
k=6,
k=9,
r=10,
r=10,
a 1 =0,
,i 1 =3,
,^ 2 =2,
A2 =2,
v=49,
k=9,
r=9,
A=3,
A2 =1,
v = 100,
k = 10,
r = 9,
a 1 =0,
,12 =1.
Shrikhande (1959b) has shown that the L 2 scheme is unique except for n = 4.
In this case there are two schemes with v = 16, n, = 6, n 2 = 9, and pi l = 2.
The second scheme arises when, in one of the L 3 schemes, we interchange first
and second associates. Suppose that the square array and the Latin square are
1 2 3 4
5 6 7 8
9101112
13141516
ABCD
BCDA
CDAB
DABC.
Let two varieties be first associates if they do not appear in the same row or
column or with the same letter; this gives a set of parameters v = 16, n l = 6,
n 2 = 9, and pi l = 2 as in the L 2 scheme, but consider the first associates of
variety 1. They are 6, 7, 10, 12, 15, and 16. The first associates of 6 are 1, 4, 11, 12,
13, and 15, and so varieties 12 and 15 are first associates of both 1 and 6. If the
scheme is an L 2 scheme, it follows that 1, 6, 12, and 15 must appear in the same
column or row of a square array and, hence, 12 and 15 are first associates.
Twelve and 15 both go with the letter B, and so they are second associates, in
contradiction. This scheme was first mentioned by Mesner (1956) and (1967).
In the same paper Shrikhande gives conditions for the nonexistence of symmetric L 2 designs based on the Hasse-Minkowski invariant.
The latent roots of NN' and their multiplicities are
0 1 =r-(i-n)(A l -,la)-,12 ,
a 1 =i(n- 1),
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 14.9]
Clatworthy (1967) has shown that most of the known L, designs belong to
four families. We shall discuss each of the families in turn. Our notation differs
from that of Clatworthy in that he talks of v = s 2 varieties while we have
v = n 2 . We shall alter the definitions of families A and D slightly in order to
include more designs. Clatworthy considers numerous special cases in each
family; the reader is referred to his paper for these.
i\,
A 2 = 0.
(k) subsets of
Family B: These are designs with k = 2n. The first n(n 1)/2 blocks consist of
all possible pairs of rows from the square array, the next n(n 1)/2 blocks
consist of pairs of columns, and so on. For the L i design we have
b=in(n 1)/2,r=i(n 1),k=2n,
=n+i-2,A 2 =i.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 14
Family D: This family consists of the ES(i) and E'S(i) designs. The parameters
for these symmetric designs are
ES(1): k = i(n 1),
,1 1 =i 2 -3i+n,
d 2 =i(i 1),
ES(2): k=(n-1)(ni+ l),
) 1 =(ni)(ni+ l),
X12 =(ni) 2 +i-2,
E'S(l): k=i(n-1)+1,
a 1 =i 2 -3i+n+2,
A 2 =i(i 1),
E'S(2): k=(n-1)(ni+1)+1,
A 1 =(ni)(ni+1),
A 2 =(ni) 2 +i.
Exercises
1. Prove that if A and B are square matrices such that AB and BA both exist, then
AB and BA both have the same nonzero latent roots.
2. Derive the P matrices for Shrikhande's two linked block designs.
3. Let U be a square matrix of order mn partitioned into m 2 square matrices U, of
order n where U 5 = al,, + bJ n if i = j, and cIn + dJn if i ^ j. Recalling that
laI. + bJ nl = an-1 (a + nb), show that
U = (a C)(n-1)(m-1)(a + nb
nd)m '(a + (m
-
1)c)n
x {a + nb + (m 1)(c + nd)}.
then k is divisible by n and every block of the design contains kin treatments
from each row of the scheme [Raghavarao (1960b)].
8. Show that for any L 2 design the following inequalities hold for b. Let
a = min(n 1, [r/1 ]), p = min(n 1, [r/,12 ]), where [x] is the integer part of x.
Then [Chang and Liu (1964)]
2b > (a + 1)(2r aa l ),
2b > (P + 1)(2r
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 309
9. Consider a PBIB(2) association scheme A in which there exists a set of u,
treatments that are all i th associates of each other. Let
wt = min(u i 1, [r/,1,]),
wi = min(u 1
2b > (w + 1)(2r w) i ),
{
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
CHAPTER
15
Additional
Topics in
Partially Balanced
Designs
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 15.1]
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 15
Bose and Clatworthy (1955) show that every PBIB(2) design with A l = 1,
sla = 0, and b < v is a partial geometry. It follows that the singly linked block
designs are partial geometries. These are one of the series of linked block
designs obtained by Shrikhande (1952), and are duals of the balanced incomplete block designs with v* = rk k + 1, r* = k, k* = r, and A* = 1. They
were mentioned at the beginning of Chapter 14. When r = 2, the singly linked
block design is a triangular design. Thus the triangular association scheme can
be obtained from a partial geometry configuration.
For a further discussion of this topic the reader is referred to the review paper
by Bose (1963) and the two monographs by Vajda (1967a,b). Further research in
this area is being carried out by students of graph theory. The representation of
association schemes as concordant graphs is mentioned by Bose and Mesner
(1959).
Mesner (1967) has extended the Li scheme to include cases where n and i are
both negative, although all the design parameters are positive. This gives the NL
family of schemes (negative Latin square). The NL(n) scheme has v = n 2 , and
the other parameters are obtained by putting n for n and i for i in the
corresponding formulae for the L i scheme. For example, the NL 3 (8) scheme has
v=64, n 1 =-3(-8-1)=27, n 2 =(-8+3+1)(-8-1)=36. The P
matrices are
P1 = [16 20,'
P2 = [1520]
'2Pi2 + A l n l }.
where kpi! = r(k 1 )Si, ^ k=1 AkPik + Aini, and Bij is the Kronecker delta.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 15.2]
but
Th = -
Si(Th)
_ -1 ChT,
'
t=1
hence,
fh
1'b
1 C h Q
and
x'^C = Ox'C.
Then
x'CA + x'Dl' = Ox'C,
x'(C 0 'Dl')A = Ox'(C 0 -1 D1'),
and 0 is a latent root of A with [C 0 - 'D1]'x as vector.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 15
then
k> = krI II*.
tr (NN') = rv = rk +
s=1
or, writing a' = ( al, 2, ... , am), n ' = (n1, %1 2, ... , nm),
r(vk)=a'@=ra'l+a'Z*1^.
Then, since 1 = v 1,
a'Z*a=r(k-1)=n'X,
which is, since the a i are independent of the ,\, an identity in the A t . This leads to
m equations to be solved for the m unknowns a l , ..., a m , (Z*)'a = n.
For two associate classes det 11* = 0 is a quadratic in 0. Connor and Clatworthy (1954) have shown that after some simplification it may be written
(r 0) 2 +
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 15.3]
Furthermore,
nl + n 2 (n l n 2 ) + Y(n1 + n2)
2/
a= 2
and
+ n 2 (n l n 2 ) + y(nl + n2)
a= nl
2 +
2\/Q
It is necessary that these multiplicities be positive integers. This imposes some
restrictions upon the parameters for the existence of designs, especially if A is
not a perfect square.
We calculate now the latent roots and their multiplicities for a group divisible
design. In this case
IH *I = Ir A l (A2
0
1)
r + l(n 1) Zn2
=m-1,
X1 1 .
We have
a2 =m(n-1).
Bose and Connor (1952) obtained this result directly by evaluating NN'I _
rk(rk v1 2 )m -1 (r ,\ ) m(n -1 Alternatively,
).
Z* n-1
_ _ n (Z*)-i =
n
0]
n
(Z *)_1 = i 0
n [1 n 1]
1J
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 15
which has -,/A in the denominator must vanish. Since y is either zero or a
positive integer, it follows that if -/A is irrational we must have n l = n 2 and
y = 0, which leads to the following result [Mesner (1965)].
If, in a PBIB(2) scheme, -/A is irrational, there is an integer t, such that
v=11 =4t+1, p12=pi2=t, n 1 =n 2 =2 = a2 =2t.
Mesner also notes that the only known cyclic association schemes as defined by
Bose and Shimamoto (1952) have parameters that satisfy these conditions. He
therefore calls any PBIB(2) scheme with %/0 irrational pseudocyclic, and proven
that a two-class association scheme with v prime must be of this type. It follows
that there are no two-class association schemes, and thus no designs, for which v
is a prime of the form 4t + 3.
We mention in passing that the only cyclic association schemes listed by Bose,
Clatworthy, and Shrikhande (1954) have v = 13, 17, 29, and 37. The varieties
can be represented by integers 1, ..., v 1, and 0. For v = 13 and 17, their
scheme gives as the first associates of the vth variety the set of nonquadratic
residues of v. For v = 29 and 37, they have the quadratic residues of v. In all
cases, either set of residues will suffice.
Mesner (1967) also uses the term pseudo-Latin square to denote any scheme
that has the same parameters as an L(n) scheme (the NL schemes are excluded).
He points out that there are such schemes which are not L, schemes, and gives as
an example the complement of an L3 (6) design. This has the same parameters as
an L 4(6) scheme would. However, no L 4 (6) scheme exists because there is no
Graeco-Latin square of side six.
be a perfect square.
The intrablock and interblock equations for PBIB(3) designs can be solved by
extending Rao's method for two-associate clans designs. This is discussed in
Rao's paper (1947a) and also by Nair (1952).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 15.5]
For certain sets of parameter values, these schemes degenerate into two-class
schemes, or, more often, certain designs are two-class designs. If, in a PBIB(m)
design all the A, are equal, then the design is a balanced incomplete block design.
It is not, however, true that if in a PBIB(3) design two of the A, are equal, the
design is automatically a two-class design and that there are only two variances;
whether or not that is true depends upon the number of distinct latent roots.
We again have for each scheme the two series of elementary symmetric designs
ES(i) and E'S(i). In the ES(i) design, the jth block consists of the n i ith
associates of the jth variety; d h = p. In the E'S(i) design, the jth block also
contains the jth variety itself; then d t = p; + 2 and ,, = p 1 where h i.
;
P 1 = ( N2 1)N3 0
N3 -1
0
(Ni 1)N2 N3 0
P2 =
0
0
(N2 2)N3 N3 1
N3-1
(Ni 1)N2 N 3 0
P 3 =
(N2-1)N3
N3-2
03= r .13.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
al
[Ch. 15
(n2 + n3 + 1)
n2
n3
0
(n3 + 1)
n3
nl
0 [al]
0 a2 = n2
1 a3
n3
and obtain
a2 = N1 (N2 1),
Nl 1,
a3 = N 1 N2 (N3 1).
Roy (1953) gives the following example of a resolvable design with parameters
v =8, b=10, r=5, k=4, N 1 =N2 =N3 =2,
0
n-2
0
0
m-1
0
P 1 =
m-1 (m-1)(n-2)
0
0
n-1
0
0
m-2
0
(m-2)(n-1)
n-1
0
P2
P3 =
1
0
n-2
0
m-2
1
n-2 m-2 (m-2)(n-2)
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 15.7]
B3 =rA 1
3 )-
a1= n-1=n1,
2 ,
+,1 3 ,
X1 2
2=
m-1
3=
(m-1)(n-1)
=n2,
=n3.
Vartak also proves that the scheme is unique in the sense that if a PBIB(3)
association scheme has P matrices identical with those above, then the scheme
must be a rectangular scheme.
If
m = n and also X1 1 =
we have designs with the L 2 scheme. In this case
B l = 0 2 . Note, however, that unless the array is square, putting A l = ,1 2 will not
make the two roots equal, and the number of associate classes is still three.
s-2
2(s-1)
P l = 2(s 1) 2(s 1)(s 2)
(s
0
(s 1) 2
(s 1) 2 (s 1) 2 (5 2)
2(s-2)
(s 1)
1)
2(s 1)(s 2)
0
P 3 =
(s 1)(s 2) 2
3(s-2)
6(s 2) 3(s 2) 2
3(s 2) 3(s 2) 2 (s 2) 3
3
=1, a 1 =3(s-1) =n 1
a2
3i
03 = r-3A 1 +3A2 A l ,
=3(s-1) 2 =n 2
a3=
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 15
12, and A 3 = 6(s - 2) = 12. The design is thus a balanced incomplete block
design with v = b = 64, r = k = 28, and ^1 = 12.
P 1 =
P z =
s+2
2s
2s
s2
s(s - 1)/2
s(s - 1)/2
2s
(s - 1)
2s
(s - 1)(s + 6)/2
(s - 1)(s - 2)
(s - 1) (s - 1)(s - 2)
P 3 =
3(s-2)
9(s - 2)
al=s+3,
a2 = (s + 1)(s + 4)/2,
a3=(s-1)(s+3)(s+4)/6.
This scheme should not be confused with the T(m) scheme given by Singh
and Singh (1964); they obtain PBIB(3) designs by replacing each treatment in a
design which has the triangular scheme for two associate classes, and v =
n(n - 1)/2 by a set of m new treatments. These singular designs are discussed at
lome length in their paper.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 15.9]
a=5;
8 2 =3 d 1 a 2 +a 3 =0,
a
a22
93 = 3 3A 1
a 3 =5.
+ 32 2 3 = 0,
=9;
In the dual, the block that contained the old varieties x, y, and z is transformed
into the treatment (x, y, z). This method is genera]. An unreduced BIBD with
v* = n, b* = ( n ), and k = 3 has for its dual a triangular PBIB(3) design with
s = n 4,A l =2,,1 2 = 1, and A=0.
P 1 =
n-2
1
n-2
n-2
2(n-2)
n-2
2(n 2)
(n 2)(n 3)
2(n-3)
n-3
P 2 =
P 3 =
a 1 = 2(n-1),
a3 = (n 1)(n 2).
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 15
,ti
_ wf
l
1,
Bi = r + 2
ah cos 27rhj/v,
h=1
ifvisodd;
(v -2)12
B1 = r + 2
h=1
if v is even.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 15.10]
As an example we may consider the design with the cyclic association scheme
given in Chapter 12:
012, 123, 234, 340, 401.
The first associates of zero are 1 and 4, a l = 2, a 2 = 1, and r = 3.
Applying the results of Connor and Clatworthy, we have y = 0,
0= 5, a 1 =a, =2, 0 i =(3 1/5)/2.
The matrix NN' is
3
1.
S = 2,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 15
(1963)], inasmuch as our action will amount only to a relabeling of the treatments. In each case, 6 will remain unchanged. Similarly, if we replaced each
treatment by its negative (mod v), we should get an equivalent design. Multiplying 0 1 4 6 by 5 gives 0 5 8 6, which is the fourth of the possible initial blocks in
John's design. Thus the two designs are equivalent.
Cyclic designs with the hierarchic group divisible scheme can be obtained
by labeling the jth treatment in the ith subgroup of the hth group as
h 1 + (i 1)N1 + (j l)N1 N2 .
With this labeling, a design with Nl = N2 = N3 = 2 would have varieties 0, 2
and 4, 6 in the subgroups of the first group and 1, 3 and 5, 7 in the other group.
The E'S(l) design is now the cyclic design generated by 0 1 3 5 7. The ES(1)
design is also cyclic and consists of the two blocks 0 2 4 6 and 1 3 5 7, each
repeated four timer. The pair of blocks is called a partial cycle.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Sec. 15.12]
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 15
(2)
= 21
Jol = 1, A 2 = 3, A3 = 2;
(0 1 3), (014)
Al = 2, A 2 = 1, A 3 = 2;
(0 1 3), (014), (0 2 4)
A l = 2, ,1a = 3, A 3
We can obtain three more designs by using the cubic scheme for v = 8.
Denoting the treatments by 000, 001, 010, and so on, with arithmetic mod 2, the
initial blocks and values of A, are
A 1 = 4, A 2 = 2, A3 = 0;
X1 1
= A 2 = 2, A s = 6;
X11
= a3 = 0, ,1
= 2.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Exercises 327
15.13 Conclusion
The construction of designs and the discovery of new schemes remains a
fertile field for research, and in this chapter we have given only a limited survey
of the field. It might, however, be appropriate to recall the last pages of Chapter
12 in which it was suggested that from a practical standpoint there is sometimes
little to choose between the various alternative designs that can be used in some
problems. We mentioned at that time the nineteen designs that J. A. John listed
for v = 12 and k = 4, with efficiencies ranging from 0.8007 to 0.8166, the
maximum being attained by a GD design. The mathematical problems discussed in the last three chapters are very interesting from a theoretical point of
view and have a fascination for pure mathematicians as well as for statisticians.
In spite of the beauty and elegance of the mathematical results, the practicing
statistician should stil) bear in mind that the more complex the design, the easier
it is for something to go wrong. We conclude with the maxim that has already
appeared at the end of Chapter 12: When you design an experiment, keep it as
simple as you can.
Exercises
1. Find the latent roots of NN' and their multiplicities for the triangular designs.
2. Find the latent roots of NN' and their multiplicities for designs with the L(n)
scheme.
3. Verify the results given for the latent roots of NN' and their multiplicities for the
several three-associate class schemes.
4. The hierarchic GD design is obtained from a GD design by replacing each
treatment by a set of N 3 new treatments. We may similarly take an L(n) scheme
and replace each treatment by a group of m new treatments. Two treatments are
said to be first associates if they belong to the same group, and second associates
if their groups correspond to first associates in the L(n) scheme. This is the
L,(n, m) scheme of Singh and Singh (1962). Find the P matrices, the latent roots
of NN', and their multiplicities for this scheme.
5. (Continuation) They also defined in the same paper the T(m) scheme, in which
they take a triangular scheme and replace each treatment by a group of m new
treatments. The three associate classes are defined as for the L,(n, m) scheme.
Derive the P matrices, the latent roots of NN', and their multiplicities for this
scheme.
6. Show that if in a PBIB(2) design 0 is not a perfect square then
P21 = P12 = Pi = t,
nt = na = al = a2 = 2t,
v = 4t + 1.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
[Ch. 15
8. (Continuation) Obtain a similar result when v = 9 or 25 by allowing the treatments to be the elements of the Galois field of v elements.
9. Show that for a PBIB(2) scheme vn 1 n 2 = 1a 1 a2 [Mesner (1965)].
10. Show that a necessary and sufficient condition for a PBIB(2) scheme to have 1
and a 2 equal in some order to n l and n 2 is that the scheme be of the pseudocyclic, the pseudo-Latin square or the NL types [Mesner (1967)].
11. Prove the following results for designs with the rectangular scheme:
(i) If 0 = 0, k is divisible by n and each block contains exactly kin treatments
from each column of the array;
(ii) If 02 = 0, k is divisible by m and each block contains kim treatments from
each row;
(iii) If 0 = B z = 0, there are k(r 1)/(b 1) treatments common to any two
blocks of the design [Vartak (1959)].
12. Show that there are only five nonisomorphic cyclic designs with v = b = 8 and
r = k = 4 and a single initial block.
13. Show that although the cyclic design for v = 8 generated by (0,. 1, 2, 4) has only
two distint values of a,, nevertheless there are four associate classes.
14. Prove that cos(27T/5) = ( 1 + x/5)/4.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Appendix
A.1 Matrices
We review in this appendix some properties of matrices, vector spaces, and
quadratic forms. The elements of all the matrices will be real numbers, and some
of the results given are not true without this restriction. Some of the results will
be proved as theorems; others will be stated without proof, and some of these
will appear later as exercises. Although it is reasonable to assume that most
students entering a graduate course in the mathematical theory of design of
experiments will have had some exposure to elementary matrix theory, many
undergraduate courses in linear algebra do not progress as far as the discussion
of quadratic forms, which are essential to the development of our subject. This
does not attempt to be a complete presentation, and the reader is referred for
further details to the standard texts. Some basic results about determinants will
be assumed.
A matrix, in the context in which we shall be considering them, is a rectangular
array of elements, which in our case will be real numbers (or, at a later stage,
smaller matrices of real numbers). We talk of a matrix A having m rows and n
columns, sometimes written (m x n), and denote by ai , the element in the ith
row and the jth column. We shall use boldface type, A, to denote matrices and we
shall write A = (a). A square matrix with m rows and m columns is said to be of
order m. If a{5 = a;; , A is called symmetrie. 0 will denote a matrix of zero elements. I, is the identity matrix, the square matrix of order n with ones along the
main diagonal and zeros elsewhere, i.e., a = 1, a, ; = 0, i j. If there is no
danger of confusion, we shall omit the subscript n and write I.
329
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
330 Appendix
A matrix A can be multiplied by a scalar (a real number) c. The product is
defined as cA = B where b,1 = caii .
Two matrices A and B, each with m rows and n columns, can be added.
Addition is defined by A + B = C where c sj = a,, + bi,.
The product AB of two matrices is defined only if the number of columns of A
is the same as the number of rows of B, in which case we define AB = C where
Ct, = I k a1kbkl. In general it is not true that AB = BA; indeed, one product may
exist and the other not. If AB = BA, the two matrices are said to commute.
The transpose of a matrix A with m rows and n columns will be written as A'.
Some authors write AT. It is defined as A' = C where C has n rows and m
columns and c, 1 = a51 . If A and B are two matrices such that AB exists, then
(AB)' = B'A'.
So far as we are concerned, a vector of n elements may be considered as a
matrix with n rows and a single column. Its transpose is sometimes called a
row vector. We shall use 1,, to denote a vector of n unit elements. Em will
denote a matrix of m rows and n columns with every element unity: Em,,,
1,,,i. We shall usually write J for E,a , n . The length of a vector y is defined as d
where d 2 = y'y = 1 y. Two vectors, x and y, are said to be orthogonal if
x'y = y'x = 0; this implies that x and y have the same number of elements.
Consider a set of vectors y l , ... , ym , each with n elements. They are said to be
linearly independent if there exists no set of scalars Cl, ..., C m (except the set
C 1 = = c m = 0) for which 1 c i yi = 0 where 0 is a vector of zero elements.
Otherwise, we have a linearly dependent set. The zero vector 0 is itself a linearly
dependent set. The collection of all linear combinations c {yi is called the vector
space, V, spanned by the set of vectors y i , ..., y m . If the set y l , ..., y m is a
linearly dependent set, Vis also spanned by a subset of y l , ... , Y. This leads us
to the idea of a basis for a vector space. We define a basis (or a Hamel basis) for a
vector space V to be a set of linearly independent vectors that span V. It can be
shown that every vector space has a basis and that all bases for a given vector
space contain the same number of vectors. This number is called the dimension
of the space. It is closely connected with the next concept, that of the rank of a
matrix. We may consider a matrix A, (m x n), as a collection of n columns or
vectors.
The rank of A, written r(A), is the number of linearly independent columns in
A, which is the same as the dimension of the vector space spanned by the
columns of A. It can be shown that this is the same as the number of linearly
independent rows of A, and that r(A) is equal to the order of the largest nonvanishing determinant that can be formed from the columns and the rows of A.
It follows that r(A) < min(m, n), and that r(0) = 0. We conclude these preliminaries by defining the inverse of a matrix and proving some theorems about
the ranks of matrices.
Let A be a square matrix, and let Al be the determinant with elements a is .
If Al = 0, A is said to be singular; if IAI 0 0, A is nonsingular. Let A, f denote
the cofactor of the element a, i in Al; A,j is the value of the determinant obtained
by striking out the ith row and the jth column of A, multiplied by (-1)'+'
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Appendix 331
Suppose now that A is nonsingular, and consider the matrix C = (c, j) where
= AjJ1Al. It follows from elementary properties of determinants, namely
1 a 1A, f = ^Al and I; akJA {f = 0 where i k, that AC = CA = I. C is called
the inverse of A and is written as A -1 . C is unique, and, if A and B are both
nonsingular, (AB) -' = B - lA -1 . Every square nonsingular matrix A has an
inverse. If r(A) is less than the order of A, Al = 0, and A has no inverse.
c{1
A.2 Orthogonality
We have mentioned that two vectors, x and y, are said to be orthogonal if the
product x'y = y'x = 0. A set of vectors of unit length which are mutually
orthogonal is called an orthonormal set. A set of n mutually orthogonal vectors of
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
332 Appendix
n elements each is a linearly independent set; it is not possible to find a (n + 1)th
vector other than 0 which is orthogonal to all the others. A matrix P (n x n)
which has for its columns a set of orthonormal vectors is called an orthogonal
matrix. If P is orthogonal, P'P = I and P' = P -1 .
If x is a vector of coordinates in Euclidean n-dimensional space and P is an
orthogonal matrix, the transformation into new coordinates y defined by
y = Px is called an orthogonal transformation and corresponds to a rotation of
the axes. A simple example occurs in two-dimensional analytic geometry when
the coordinate axes are rotated through an angle 0. With respect to the new axes,
the coordinates of the point (x 1 , x 2 ) become (y l , y 2 ), where y l = x l cos B x 2
sin 0, Y 2 = x l sin 0 + x 2 cos 0, or
[y 2 ] [sin B cos 9, [x 2 ,
[y 2 ] [sin B cos 9, [x 2 ,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Appendix 333
A is called a latent root (or characteristic root or proper value or eigenvalue) of
A, and x is a latent (characteristic, proper or eigen-) vector corresponding to A.
Counting multiplicities, there are exactly n roots; if A is symmetrie, the number
of nonzero roots of A is equal to the rank of A. We now confine ourselves to
symmetrie matrices A.
Theorem 1. If X11 , a ; are two latent roots of A such that ,\ 0 ,1 j , and x, x ; are two
corresponding latent vectors, then x i and x ; are orthogonal.
PROOF. We have Ax ; = ,1 i xj ,
{
AP = PA,
where A is a diagonal matrix (i.e., a matrix with all its off-diagonal elements
zero), having as the diagonal elements the latent roots, each appearing as many
times as its multiplicity. Multiplying on the left by P' gives P'AP = P'PA = A.
We state this result as a theorem.
Theorem 2. Let A be a square symmetrie matrix, and A be the diagonal matrix
fust defined. There exists an orthogonal matrix P such that P'AP = A. Conversely, if there exists an orthogonal matrix P such that P'AP = D where D is
diagonal, the diagonal elements are the latent roots of A.
Since P is nonsingular, r(A) = r(P'AP) = r(A), and we see that the rank of A
is equal to the number of nonzero latent roots, counting their multiplicities.
Denote the ith diagonal element of A by Al . Let a diagonal matrix D be constructed as follows. The ith diagonal element d ij of D = 1 if A l = 0 and -1 / 2 if
a, 0. Let Q = PD. Q is not singular. Then the transformation Y = QZ
changes Y'AY into 1 z{ where the number of positive signs is equal to the
number of positive latent roots, and the number of negative signs is equal to the
number of negative latent roots.
If B is a nonsingular matrix we have
B -1 Ax = B 'ABB ix = B llx = AB -1 x,
-
so that A is also a latent root of B 'AB with latent vector B 'x. The two matrices
A and B 'AB are said to be similar.
-
Theorem 3. A is positive definite if, and only if, all its latent roots are positive.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
334 Appendix
PROOF. Let Z = P'Y, where P is an orthogonal matrix such that P'AP = A.
Then Y'AY = Y'PP'APP'Y = Z'AZ, and, since Z = 0 if, and only if, Y = 0,
the form Y'AY is positive definite if, and only if, Z'AZ is positive definite. Thus
A is positive definite if, and only if, A is positive definite, i.e., since A is diagonal,
if, and only if, all the diagnal elements of A are positive.
3
Similarly, A is positive semidefinite if, and only if, A has no negative latent
roots and has at least one zero latent root, which implies that A is singular.
The trace of a square matrix A is defined as the sum of the diagonal elements:
tr(A) = 1 a, i . It is easily shown by performing the multiplications that, if A and
B are both square matrices, tr(AB) = tr(BA).
Ax=Axy
(A.1)
Ay = Ay + x.
(A.2)
Multiply Equation A. 1 on the left by y'. Multiply Equation A.2 on the left by x'
and transpose it. Then
(A.3)
Theorem 6. The latent roots of Aa are the squares of the latent roots of A.
PROOF.
P'APP'AP = P'A 2P = A2
so that the orthogonal matrix P also diagonalizes A 2 , and the diagonal elements
of the diagonalized matrix are d, = A. Thus the latent roots of A 2 are Aa.
Furthermore, multiplying Ax = Ax on the left. by A gives
A2x = AAx = A2x,
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Appendix 335
and we see that each vector x corresponding to a root ,1 of A also corresponds to
a root A 2 of A 2 .
The following theorem is of particular use to us.
Theorem 7. Let X be a real matrix with m rows and n columns. Then X'X is
nonnegative definite and r(X'X) = r(X).
Since X'X is symmetric, there is an orthogonal P such that P'X'XP = A.
Let B = (b if) = XP. Then B'B = A, and we have, writing the columns of B as
vectors, b i , bbi = a, and babi = 0 where i # j. It follows that A, = 0 if and only
if b, = 0; otherwise, > 0. Thus the latent roots are nonnegative and X'X is
nonnegative definite.
The vectors b, are mutually orthogonal. The rank of X'X is equal to the
number of positive diagonal elements of A, which, in turn, is the number of b $
that are not 0. Thus, r(X'X) = r(B) = r(XP) = r(X). E
We state without proof the following theorem, which is to be found in many
of the standard textbooks.
PROOF.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
336 Appendix
For example, we may have the following four equations in two unknowns:
+ x2 = 3
(A.4)
xl
+ 2x2 = 4
(A.5)
2x 1
+ 3x2 = 7
(A.6)
2x 1
+ 3x 2 = 8.
(A.7)
x1
Equation A.4 alone admits an infinity of solutions; we may take any number t
that we wish and obtain the solution vector x' = (t, 3 t).
The pair of equations A.4 and A.5 has the unique solution vector x' = (2, 1).
The addition of equation A.6 makes no difference because it is actually just the
sum of Equations A.4 and A.5. When, however, Equation A.7 is included we have
an inconsistent set; subtracting Equation A.6 from Equation A.7 would give
0=1.
We state the following results without proof. B is the augmented matrix
(A, b), i.e., the matrix A with the column b added to it. A set of equations is raid
to be consistent if it has at least one solution.
A necessary and sufficient condition for the equations to be consistent is that
r(A) = r(B). If r(A) = r(B) = n, there is a unique solution vector; if r(A) =
r(B) < n, then there is an infinity of solutions and n r(A) of the x i may be
assigned arbitrarily.
Exercises
The exercises involve the derivation of some results stated without proof in the
text. A denotes a square symmetric matrix of order n with real elements. C is any
matrix with real elements.
1. Show directly that (AC)' = C'A'.
2. All bases for a given finite dimensional vector space have the same number of
vectors.
3. Let V be the space of all vectors in En (Euclidean n space). The dimension of
V. is n.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Appendix 337
9. If A is a latent root of A with multiplicity m, show that we can find a set of m
mutually orthogonal latent vectors (but no more) corresponding to A.
10. A is positive semidefinite if, and only if, A has at least one zero latent root and no
negative latent roots.
11. tr(BC) = tr(CB).
12. If there exists an orthogonal matrix P such that P'AP is diagonal, then
P'AP = A.
13. A necessary and sufficient condition for A to be positive definite is that every
principal minor of IAI be positive.
14. If A is idempotent and I = A + B, then B is idempotent and AB = BA = 0.
15. If the elements of C are real, C'C = 0 if, and only if, C = 0. Show by a counterexample that this is not true when C has complex elements.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Bibliography
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
340 Bibliography
BOSE, R. C. (1 942a). "On Some New Series of Balanced Incomplete Block Designs."
Bull. Calcutta Math. Soc., 34, 17-31.
BOSE, R. C. (1942b). "A Note on Two Series of Balanced Incomplete Block Designs."
Bull. Calcutta Math. Soc., 34, 129-130.
BOSE, R. C. (1949). "A Note on Fisher's Inequality for Balanced Incomplete Block
Designs." Ann. Math. Statist., 20, 619-620.
BOSE, R. C. (1963). "Combinatorial Properties of Partially Balanced Designs and
Association Schemes." Sankhya, Ser. A., 25, 109-136.
BOSE, R. C., and K. A. B.uSH (1952). "Orthogonal Arrays of Strength Two and
Three." Ann. Math. Statist., 23, 508-524.
BOSE, R. C. and W. H. CLATWORTHY (1955). "Some Classes of Partially Balanced
Designs." Ann. Math. Statist., 26, 212-232.
BOSE, R. C., W. H. CLATWORTHY, and S. S. SHRIKHANDE (1954). "Tables of Partially
Balanced Designs with Two Associate Classes." North Carolina Agric. Exp.
Station. Tech. Bull. No. 107.
BOSE, R. C., and W. S. CONNOR (1952). "Combinatorial Properties of Group
Divisible Incomplete Block Designs." Ann. Math. Statist., 23, 367-383.
BOSE, R. C., and K. KISHEN (1940). "On the Problem of Confounding in the General
Symmetrie Factorial Design." Sankhya, 5, 21-36.
BosE, R. C., and D. M. MESNER (1959). "On Linear Associative Algebras Corresponding to Association Schemes of Partially Balanced Designs." Ann. Math.
Statist., 30, 21-38.
BOSE, R. C., and K. R. NAIR (1939). "Partially Balanced Incomplete Block Designs."
Sankhya, 4, 337-372.
BOSE, R. C., and T. SHIMAMOTO (1952). "Classification and Analysis of Designs with
Two Associate Classes." J. Amer. Statist. Ass., 47, 151-184.
BOSE, R. C., S. S. SHRIKHANDE, and K. N. BHATTACHARYA (1953). " On the Construction
of Group Divisible Incomplete Block Designs." Ann. Math. Statist., 24,167-195.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Bibliography 341
C., S. S. SHRIKHANDE, and E. T. PARKER (1960). "Some Further Results on
the Construction of Mutually Orthogonal Latin Squares and the Falsity of
Euler's Conjecture." Canad. J. Math., 12, 189-203.
Box, G. E. P. (1953). "Non-normality and Tests on Variances." Biometrika, 40,
318-335.
Box, G. E. P. (1957). "Evolutionary Operation: A Method for Increasing Industrial
Productivity." Applied Statist., 6, 3-23.
Box, G. E. P., and D. W. BEHNKEN (1960). "Simplex Sum Designs: A Class of
Second Order Rotatable Designs Derivable from Those of First Order." Ann.
Math. Statist., 31, 838-864.
Box, G. E. P., and J. S. HUNTER (1957). "Multifactor Experimental Designs for
Exploring Response Surfaces." Ann. Math. Statist., 28, 195-242.
Box, G. E. P., and J. S. HUNTER (1959). "Condensed Calculations for Evolutionary
Operation Programs." Technometrics, 1, 77-95.
Box, G. E. P., and J. S. HUNTER (1961). "The 2k p Fractional Factorial Designs."
Technometrics, 3, Part I, 311-352; Part II, 449-458.
Box, G. E. P., and K. J. WILSON (1951). "On the Experimental Attainment of
Optimum Conditions." J. Roy. Statist. Soc., Ser. B., 13, 1-45.
Box, G. E. P., and P. V. YOULE (1955). "The Exploration and Exploitation of
Response Surfaces: An Example of the Link Between the Fixed Surface and the
Basic Mechanism of the System." Biometrics, 11, 287-323.
BROWNLEE, K. A., B. K. KELLY, and P. K. LORAINE (1948). "Fractional Replication
Arrangements for Factorial Experiments with Factors at Two Levels." Biometrika,
35, 268-276.
BRUCK, R. H., and H. J. RYSER (1949). "The Non-existence of Certain Finite
Projective Planes." Canad. J. Math., 1, 88-93.
BULMER, M. G. (1957). "Approximate Confidence Limits for Components of
Variance." Biometrika, 44, 159-167.
BURTON, R. C., and W. S. CONNOR (1957). "On the Identity Relationship for
Fractional Replicates in the 2" Series." Ann. Math. Statist., 28, 762-767.
CALVIN, L. C. (1954). "Doubly Balanced Incomplete Block Designs for Experiments
in Which the Effects Are Correlated." Biometrics, 10, 61-88.
CHANDA, et al. (1952). "The Use of Chromium Sesquioxide to Measure the Digestibility of Carotene by Goats and Cows." J. Agr. Sci., 42, 179-185.
CHANG, L. C. (1959). "The Uniqueness and Non-uniqueness of the Triangular
Association Schemes." Science Record, 3, new series, 604-613.
CHANG, L. C. (1960)." Association Schemes of PartiallyBalanced Designswith Parameters v = 28, n l = 12, n 2 = 15, pi l = 4." Science Record, 4, new series, 12-18.
CHANG, L. C., and W. R. Liu (1964). "Incomplete Block Designs with Square
_ 10." Scientia Sinica, 13, 1493-1495.
Parameters for which k <_ 10 and r <
CHANG, L. C., C. W. Liu, and W. R. Liu (1965). "Incomplete Block Designs with
_ 10." Scientia Sinica, 14, 329-338.
Triangular Parameters for k < 10 and r <
CHOWLA, S., and H. J. RYSER (1950). "Combinatorial Problems." Canad. J. Math.,
2, 93-99.
CLATWORTHY, W. H. (1956). "Contributions on Partially Balanced Incomplete
Block Designs with Two Associate Classes." National Bureau of Standards.
BOSE, R.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
342 Bibliography
COCHRAN, W.
"Some Relations Among the Blocks of Symmetrical GroupDivisible Designs." Ann. Math. Statist., 23, 602-609.
CONNOR, W. S. (1958). "The Uniqueness of the Triangular Association Scheme."
CONNOR, W. S. (1952b).
Boyd, London.
DEBAUN, R. (1959).
Technometrics, 1, 1-8.
DRAPER, N. R. (1960a). "Third Order Rotatable Designs in Three Dimensions.'
Ann. Math. Statist., 31, 865-874.
DRAPER, N. R. (1960b). "A Third Order Rotatable Design in Four Dimensions.'
Ann. Math. Statist., 31, 875-877.
DRAPER, N. R. (1961). "Third Order Rotatable Designs in Three Dimensions: Some
Specific Designs." Ann. Math. Statist., 32, 910-913.
DRAPER, N. R. (1962). "Third Order Rotatable Designs in Three Factors: Analysis."
Technometrics, 4, 219-234.
DRAPER, N. R., and H. SMLTH (1966). Applied Regression Theory. John Wiley and
FINNEY, D.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Bibliography 343
FINNEY, D. J. (1946). "Recent Developments in the Design of Field Experiments.
I. Split-Plot Confounding." J. Agri. Sci., 36, 56-62.
FISHER, R. A. (1925). Statistical Methods for Research Workers. Oliver and Boyd,
Edinburgh.
FISHER, R. A. (1940). "An Examination of the Different Possible Solutions of a
Problem in Incomplete Blocks." Annals of Eugenics, 10, 52-75.
FISHER, R. A. (1942). "The Theory of Confounding in Factorial Experiments in
Relation to the Theory of Groups." Annals of Eugenics, 11, 341-353.
FISHER, R. A. (1947). The Design of Experiments. (Fourth ed.) Oliver and Boyd,
Edinburgh.
FISHER, R. A., and F. YATES (1953). Statistical Tables for Biologica!, Agricultural,
and Medical Research. (Fourth ed.) Oliver and Boyd, Edinburgh.
Fox, M. (1956). "Charts of the Power of the F Test." Ann. Math. Statist., 27,
484-497.
FREEMAN, G. H. (1957). "Some Further Methods of Constructing Regular Group
Divisible Incomplete Block Designs," Ann. Math. Statist., 28, 479-487.
FYFE, J. L., and N. GILBERT (1963). "Partial Diallel Crosses." Biometrics, 19,
278-286.
GARDINER, D. A., A. H. E. GRANDAGE, and R. J. HADER (1959). "Third Order
Rotatable Designs for Exploring Response Surfaces." Ann. Math. Statist., 30,
1082-1096.
GooD, I. J. (1958). "The Interaction Algorithm and Practical Fourier Analysis."
J. Roy. Statist. Soc., Ser. B., 20, 361-372.
GooD, I. J. (1960). Addendum to "The Interaction Algorithm and Practical Fourier
Analysis," J. Roy. Statist. Soc., Ser. B., 22, 372-375.
GRAYBILL, F. A. (1961). An Introduction to Linear StatisticalModels. Vol. I. McGrawHill, New York.
GRAYBILL, F. A., and R. B. DEAL (1959). "Combining Unbiased Estimators."
Biometrics, 15, 543-550.
GRAYBILL, F. A., and G. MARSAGLIA. (1957). "Idempotent Matrices and Quadratic
Forms in the General Linear Hypothesis." Ann. Math. Statist., 28, 678-686.
GRAYBILL, F. A., and V. SESHADRI (1960). 1 On the Unbiasedness of Yates' Method
of Estimation Using Interblock Information." Ann. Math. Statist., 31, 786-787.
GRAYBILL, F. A., and D. L. WEEKS (1959). "Combining Interblock and Intrablock
Information in Balanced Incomplete Blocks." Ann. Math. Statist., 30, 799-805.
GRIFFING, B. (1956). "Concept of General and Specific Combining Ability in
Relation to Diallel Crossing Systems." Austral. J. Biol. Sci., 9, 463-493.
GRoss, H. D., E. R. Parvist, and G. A. Ahlgren (1953). "The Response of Alfalfa
Varieties to Different Soil Fertility Levels." Agron. J., 45, 118-120.
GRUNDY, P. M., and M. J. R. HEALY (1950). "Restricted Randomization and
Quasi-Latin Squares." J. Roy. Statist. Soc., Ser. B, 12, 286-291.
HALL, M., and W. S. CONNOR (1953). "An Embedding Theorem for Incomplete
Block Designs." Canad. J. Math., 6, 35-41.
HALL, M., and H. J. RYSER (1951). "Cyclic Incidence Matrices." Canad. J. Math.,
3, 495-502.
HAMMERSLEY, J. M. (1949). "The Unbiased Estimate and Standard Error of the
Interclass Variance." Me/ron, 15, 173-188.
HANANI, H. (1961). "The Existence and Construction of Balanced Incomplete
Block Designs." Ann. Math. Statist., 32, 361-386.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
344 Bibliography
HANANI, H. (1965).
711.
HARTLEY, H. O.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Bibliography 345
KAPADIA, C. H., and D. L. WEEKS (1964). "On the Analysis of Group Divisible
Designs." J. Amer. Statist. Ass., 59, 1217-1219.
KEMPTHORNE, O. (1952). The Design and Analysis of Experiments. John Wiley and
Sons, New York.
KEMPTHORNE, O. (1953). "A Class of Experimental Designs Using Blocks of Two
Plots." Ann. Math. Statist., 24, 76-84.
KEMPTHORNE, O. (1955). "The Randomization Theory of Experimental Inference."
J. Amer. Statist. Ass., 50, 946-967.
KEMPTHORNE, 0., and W. T. FEDERER (1948). "The General Theory of Prime Power
Lattice Designs." Biometrics, 4, Part 1, 54-79; Part II, 109-121.
KEULS, M. (1952). "The Use of the 'Studentized Range' in Connection with an
Analysis of Variance." Euphytica, 1, 112-122.
KISHEN, K. (1945). "On the Design of Experiments for Weighing and Making Other
Types of Measurements." Ann. Math. Statist., 16, 294-300.
KRUSKAL, W. H., and W. A. WALLIS (1952). " Use of Ranks in One Criterion Analysis
of Variance." J. Amer. Statist. Ass., 47, 583-621.
LANCASTER, H. O. (1954). "Traces and Cumulants of Quadratic Forms in Normal
Variables." J. Roy. Statist. Soc., Ser. B., 16, 247-254.
LUCAS, H. L. (1951). "Bias in Estimation of Error in Change-Over Trials with
Dairy Cattle." J. Agri. Sci., 41, 146-148.
LUCAS, H. L. (1957). "Extra-Period Latin Square Change-Over Designs." J. Dairy
Sci., 40, 225-239.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
346 Bibliography
MILLER, R. G., Jr. (1966). Simultaneous Statistical Inference. McGraw-Hill, New
York.
MooD, A. M. (1946). "On Hotelling's Weighing Problem." Ann. Math. Statist., 17,
432-446.
MURTY, V. N. (1961). "An Inequality for Balanced Incomplete Block Designs."
Ann. Math. Statist., 32, 908-909.
NAIR, K. R. (1952). "Analysis of Partially Balanced Incomplete Block Designs
Illustrated on the Simple Square and Rectangular Lattices." Biometrics, 8,122-155.
NAIR, K. R., and C. R. RAO (1942). "A Note on Partially Balanced Incomplete
Block Designs." Science and Culture, 7, 568-569.
NANDI, H. K. (1945). "On the Relation Between Certain Types of Tactical Configurations." Bull. Calcutta Math. Soc., 37, 92-94.
NATIONAL BUREAU OF STANDARDS (1957). "Fractional Factorial Experiment Designs
for Factors at Two Levels." Applied Mathematics Series, No. 48.
NATIONAL BUREAU OF STANDARDS (1959). "Fractional Factorial Experiment Designs
for Factors at Three Levels." Applied Mathematics Series, No. 54.
NATIONAL BUREAU OF STANDARDS (1961). "Fractional Factorial Designs for
Experiments with Factors at Two or Three Levels." Applied Mathematics Series,
No. 58.
NELDER, J. A. (1963). "Identification of Contrasts in Fractional Replication of 2n
Experiments." Applied Statistics, 12, 38-43.
NEWMAN, D. (1939). "The Distribution of the Range in Samples from a Normal
Population, Expressed in Terms of an Independent Estimate of the Standard
Deviation." Biometrika, 31, 20-30.
NEYMAN, J., et al. (1935). "Statistical Problems in Agricultural Experimentation."
J. Roy. Statist. Soc., Suppl., 2, 107 -154.
OGAWA, J. (1949). "On the Independence of Bilinear and Quadratic Forms of a
Random Sample from a Normal Population." Ann. Inst. Statist. Math. Tokyo, 1,
83-108.
OGAWA, J. (1959). "A Necessary Condition for Existence of Regular and Symmetrical Experimental Designs of Triangular Type, with Partially Balanced
Incomplete Blocks." Ann. Math. Statist., 30, 1063 -1071.
PALEY, R. E. A. C. (1933). "On Orthogonal Matrices." J. Math. Phys., 12, 311-320.
PAPATHANASIOU, G. A., K. J. LESSMAN, and W. E. NYQUIST (1966). "Evaluation of
Eleven Introductions of Crambe, Crambe Abyssinica Hochst." Agron. J., 58,
587-589.
PATTERSON, H. D. (1950). "The Analysis of Change-Over Trials." J. Agri. Sci., 40,
375-380.
PATTERSON, H. D. (1952). "The Construction of Balanced Designs for Experiments
Involving Sequences of Treatments." Biometrika, 39, 32-48.
PEARSON, E. S., and H. O. HARTLEY (1951). "Charts of the Power Function of the
Analysis of Variance Tests, Derived from the Non-Central F Distribution."
Biometrika, 38, 112-130.
PEARSON, E. S., and H. O. HARTLEY (1954). Biometrika Tables for Statisticians,
vol. 1, 176-177.
PEART, J. N. (1968). "Lactation Studies with Blackface Ewes and Their Lambs."
J. Agri. Sci., 70, 87-94.
PETERSEN, E. M. (1952). "Controlling Tobacco Sucker Growth with Maleic Hydrazide." Agron. J., 44, 332-334.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Bibliography 347
PLACKETT, R.
157.
PLACKETT, R. L. (1960). Regression Analysis.
30, 295-303.
RAGHAVARAO, D. (1960a). "A Generalization of Group Divisible Designs." Ann.
Math. Statist., 31, 756-765.
RAGHAVARAO, D. (1960b). "On the Block Structure of Certain PBIB Designs with
L2
RAO, C.
on the Habits of Zebu Cattle IV. Errors Associated with Recording Technique."
J. Agron. Sci., 46, 1 -5.
Roy, J. (1958). "On the Efficiency Factor of Block Designs." Sankhya, 19, 181-188.
Roy, J., and R. G. LAHA (1957a). "On Partially Balanced Linked Block Designs."
Ann. Math. Statist., 28, 488-493.
ROY, J., and R. G. LAHA (1957b). "Classification and Analysis of Linked Block
Designs." Sankhya 17, 115-132.
Roy, P. M. (1952). "A Note on the Resolvability of Balanced Incomplete Block
Designs." Bull. Calcutta Statist. Ass., 4, 130-132.
Roy, P. M. (1953). "Hierarchical Group Divisible Incomplete Block Designs with
m Associate Classes." Science and Culture, 19, 210-211.
SATTERTHWAITE, F. (1946). "An Approximate Distribution of Estimates of Variante
Components." Biometrics Bulletin, 2, 110 -114.
;
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
348 Bibliography
(1953). "A Method for Judging All Contrasts in the Analysis of
Variance." Biometrika, 40, 87-104.
SCHEFF, H. (1956a). "A `Mixed Model' for the Analysis of Variance." Ann. Math.
SCHEFF, H.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Bibliography 349
G. (1901). "Le problme de 36 officieurs." Compte Rendu de l'Assoc.
Franaise pour l'Avancement de Science Naturel, 2, 170-203.
TUKEY, J. W. (1949). "One Degree of Freedom for Non-Additivity." Biometrics, 5,
232-242.
TUKEY, J. W. (1953). "The Problem of Multiple Comparisons." Dittoed manuscript,
396 pp., Princeton University.
VAJDA, S. (1967a). "Patterns and Configurations in Finite Spaces." Griffin's
Statistical Monographs and Courses, No. 22. Charles Griffin and Company,
TARRY,
London.
VAJDA, S.
WILK, M. B.,
WILK, M.
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
350 Bibliography
YATES, F. (1940). "The Recovery of Interblock Information in Balanced Incomplete
Block Designs." Annals of Eugenics, 10, 317-325.
YATES, F. (1948). "Discussion on a paper by F. Anscombe." J. Roy. Statist. Soc.,
Ser. A., 111, 204-205.
YOUDEN, W. J. (1951). "Linked Blocks, A New Class of Incomplete Block Designs."
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Index
resolvable, 226
symmetric designs, 220, 269, 276277, 281-283
unreduced designs, 270, 307
Balanced lattices, 240, 307
Bancroft, T. A., 240, 344
Banerjee, K. S., 28, 339
Baumert, L., 184, 339
Behnken, D. W., 199, 341
Bennett, C. A., 96, 339
Bhattacharya, K. N., 277, 282, 285,
292, 295, 298, 299, 323, 339, 340
Binary designs, 227
Binet, F. E., 145, 340
Block intersection, 281
Block section, 281
Blocking factors, 158
Bose, R. C., 10, 24, 111, 114, 144, 178,
221, 223, 227, 249, 250, 252, 256,
265, 269, 281, 282, 283, 285, 286,
288, 291, 292, 293, 294, 295, 298,
299, 300, 301, 310, 312, 314, 315,
316, 323, 340, 341
Box, G. E. P., 14, 46, 150, 151, 193,
194, 197, 199, 211, 213, 214, 341
Brownlee, K. A., 139, 341
Bruck, R. H., 114, 341
Bulmer, M. G., 54, 341
351
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
352 Index
Burman, J. P., 172, 178, 184, 347
Burton, R. C., 139, 140, 341
Bush, K. A., 178, 340
Calvin, L. C., 287, 341
Cannon, C. Y., 117, 342
Canonical equations, 208-209, 211-212
Central composite designs, 204
Chandrasekhararao, K., 319, 347
Chang, L. C., 301, 305, 308, 309, 341
Change-over designs, 115-121
Checks in calculations, 47; see also
Yates' algorithm
Chowla, S., 269, 276, 283, 341
Classification of fractional factorials,
151
Clatworthy, W. H., 252, 265, 288, 298,
301, 304, 305, 306, 307, 312, 314,
315, 316, 340, 341, 342
Cochran, W. G., 6, 33, 117, 341, 342
Cochran's theorem, 33, 71
Combined intrablock and interblock estimates, 235-245
computational formulae, 238-242
in partially balanced designs, 259260
maximum likelihood estimates (Rao),
242-245
Combining ability, see Diallel cross experiments
Complementary designs, 270
Completely randomized experiment, 4145
Components of variance, confidence intervals for, 54
Computer programs, use of, 102-103
Confounding, 12, 132-245
in fractional factorials, 158
in ,2n designs, 133-143
in 3' designs, 143
in 4n designs, 144-145
in other designs, 145
partial confounding, 134-135
with factors at more than three levels,
144-45
Connected designs, 233
Connor, W. S., 139, 140, 181, 190, 252,
281, 283, 292, 293, 301, 304, 314,
315, 340, 341, 342
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Index 353
Expected mean squares,
general rules for deriving, 96-98
multi-factor crossed classification, 9091
Extended incomplete block designs, 248
F test
approximation, 92-94
bias in with missing plots, 60
power of, 7, 44, 53
Factorial experiments, 10
Federer, W. T., 45, 260, 261, 342, 345
Finite projective geometrics, 271-274,
300, 310-312
Finney, D. J., 12, 148, 175, 178, 193,
342, 343
First order designs, 194-196
Fisher, R. A., 2, 4, 136, 180, 221, 265,
268, 269, 282, 343
Fisher's inequality, 221, 269
Five-letter plans, 151
Foldover designs, 156-157, 173-174
Four-letter plans, 151
Fox, M., 8, 44, 343
Fractional factorial designs, 12, 148192
Franklin, N. J., 96, 339
Freeman, G. H., 292, 295, 297, 343
Fundamental theorems of differences,
277-280
for group divisible designs, 299-300
Fyfe, J. L., 262, 343
Gardner, D. A., 213, 343
Gauss-Markoff theorem, 34-35
Gilbert, N., 262, 343
Goldsmith, R. L., 205, 213, 339
Golomb, S. W., 184, 339
Good, I. J., 128, 343
Graeco-Latin squares, 110
as fractional factorials, 111, 148, 178,
179, 189, 191-192
Grandage, A. H. E., 213, 343
Graybill, F. A., 8, 27, 28, 76, 230, 238,
242, 343
Griffing, B., 81, 262, 343
Group divisible designs, 252-254, 292301
classification, 252, 293
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
354 Index
Intrablock analysis (continued)
group divisible designs, 253-254
PBIB designs, 256-259
Intrablock subgroup, 138
James, E., 240, 344
James, G. S., 28, 344
John, J. A., 266, 322, 323, 326, 344
John, P. W. M., 28, 139, 161, 163, 165,
167, 170, 192, 226, 246, 248, 320,
344
Johnson, J. D., 321, 344
Kapadia, C. H., 259, 345
Kelly, B. K., 139, 341
Kempthorne, 0., 5, 8, 10, 27, 78, 81,
109, 187, 189, 230, 247, 260, 261,
262, 265, 289, 322, 339, 345
Kempthorne's conjecture, 10, 247, 265,
289
Keuls, M., 45, 345
Kishen, K., 144, 172, 340, 345
Kruskal, W. H., 46, 345
Lancaster, H. 0., 28, 31, 345
Laha, R. G., 290, 347
Latin rectangles, 142-143
Latin squares, 105-121
experiments using several, 114-121
orthogonal sets, 111-114, 221-222,
270
Latin square designs, 12, 105-121
analysis of, 106-107
limitations of, 108-109
use as fractional factorials, 107
Lattice designs, 240, 260-262, 271, 307
Least significant difference, 44, 226
Legendre symbol, 185, 276
Leslie, R. T., 145, 340
Linear models, 18
Linked block designs, 290-291, 302303, 312
singly linked blocks, 291, 302, 312
triangular doubly linked blocks, 303
Liu, C. W., 301, 309, 341
Liu, W. R., 301, 305, 308, 309, 341
Live factors, 160
Live subscripts, 97
Loraine, P. K., 139, 341
Lucas, H. L., 117, 345
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
Index 355
Orthogonal main effects plans, 184
Orthogonal polynomials, 50
Orthogonal response surface designs,
197
Orthogonality of factors in two-way layout, 68-70
Paley, R. E. A. C., 185, 346
Parker, E. T., 114, 341
Partial confounding, 134
Partial geometry, 311
Partially balanced association schemes,
250
cubic, 319
cyclic, 255, 315
group divisible, 252, 292-301
hierarchic GD, 317
Latin square, 255, 305-308
L.(n,m), 327
LS3, 321
negative Latin square, 256, 306, 312
rectangular, 318
T.(m), 320
triangular, 254, 301-305, 320
Partially balanced incomplete block designs, 10, 223, 250-267, 288-328;
see also the various schemes
Downloaded 12/11/12 to 129.128.207.242. Redistribution subject to SIAM license or copyright; see http://www.siam.org/journals/ojsa.php
356 Index
Scheff's S statistic, 45, 226
Schneider, A. M., 200, 348
Schtzenberger, M. P., 269, 348
Screening experiments, 13, 149
Second order designs, 196
Seshadri, V., 238, 242, 343, 348
Shimamoto, T., 250, 252, 256, 316, 340
Shrikhande, S. S., 114, 252, 265, 269,
288, 291, 292, 295, 298, 299, 301,
306, 312, 316, 323, 340, 348
Singh, K. N., 320, 327, 348
Singh, N. K., 320, 327, 348
Single degrees of freedom, 48-52, 7376
Tukey's test for interaction, 76
Smith, C. A. B., 277, 348
Smith, H., 21, 342
Solution matrices, 24
general methods of obtaining, 26-28
for reduced intrablock equations,
230-233
Split plots, 11, 98, 142
Split-split plots, 101
Sprague, G. F., 81, 348
Sprott, D. A., 245, 249, 269, 283, 284,
348
Standard order, 128, 132
Steel, R. G. D., 46, 348
Steepest ascent, 208
Steiner, J., 283, 348
Stevens, W. L., 113, 348
Stockett, A. L., 200, 348
Studentized range, 45
Student's t distribution, approximation
with unequal variances, 6
Subdivision of sums of squares, 73
for 3n design, 130
Sums of squares, general rules for deriving, 96
subdivision, 73
Tanden, R. K., 101, 348
Tang, P. C., 44, 348
Tang's tables, 8, 44
Tarry, G., 114, 349
Tatum, L. A., 81, 348
Three-letter plans, 151
Three quarter replicates, 163