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    Introduction To Matlab

    Uploaded by

    Junaid Iqbal

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    Attribution Non-Commercial (BY-NC)
    Download as PDF, TXT or read online from Scribd

    Introduction To Matlab

    Uploaded by

    Junaid Iqbal
    244 views45 pages

    Original Title

    Introduction to Matlab

    Copyright

    © Attribution Non-Commercial (BY-NC)

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    PDF, TXT or read online from Scribd

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    244 views45 pages

    Introduction To Matlab

    Uploaded by

    Junaid Iqbal

    Copyright:

    Attribution Non-Commercial (BY-NC)
    Download as PDF, TXT or read online from Scribd
    Download as pdf or txt
    of 45

    Introduction to Matlab & Data Analysis

    Lecture 1: Introduction

    Lecture time:

    Sunday 9:00 11:00 Wolfson

    Course website: http://www.weizmann.ac.il/midrasha/courses/MatlabIntro/

    Eran Eden, Weizmann 2008

    Team members

    Lecturers:

    Natalie Kalev-Kronik kalev001@umn.edu Yuval Hart Maya Geva

    Tutors:

    Yuval Hart Maya Geva Anat Tzimmer

    Exercise checkers:
    Anat Tzimmer Ariel Gispan

    Tips / formalities

    Course website http://www.weizmann.ac.il/midrasha/courses/MatlabIntro The website contains


    Course material: Lectures + tutorials + other Matlab resources HW and solutions News

    Where can I do the HW?


    On any pc computer at Weizmann (installation of Matlab will be discussed in the first tutorial) In the tutorial class

    Grade

    HWs 60% + 40% Final Project


    Official course book: Mastering Matlab 7, Hanselman & Littlefield Matlab built-in tutorial and references
    3

    Course references

    Tips / formalities

    Signing up for tutorials


    Levine 101 (#1) Sunday 09:00 11:00 (#2) Wednesday 9:00 11:00 Starts Nov 9, 2011. Choose either.

    HW assistance at the computer room


    Once a week in Levine 101 Wednesday 11:00-13:00 (Starts Nov 16, 2011)

    Course overview

    Introduction to Matlab

    Matlab building blocks: 1D 2D and 3D arrays


    Simple data analysis and graphics Control and boolean logic Loops Functions and program design Cells, structures and Files Simple algorithms and complexity Debugger GUI toolbox

    Producing publication quality graphs (Maya Geva)


    Solving ODEs for a living:

    Math modeling of cancer treatment (Natalie) Protein production (Prof. Nir Friedman)

    TBD (Yuval Hart)

    For whom is the course intended?


    For student with no or little experience of Matlab- first two thirds of the course.
    For students familiar with Matlab who want to expand their knowledge using Matlab toolboxes- especially last four weeks.

    What is the course about?


    (1) Programming in Matlab

    (2) Tackling data analysis problems with Matlab

    What is the course about?


    Example #1 of a data analysis problem
    CAGCATATTTGAAGCCGGGCCCACACACAATTGGGGAACGGATCCCCGCGGCCTCCCGGCA GACCCCGTCCGGCACGACGACGAAGAAGGGGAGGATGAAGTCGAATTTGAAGCGGATGAAG GATGAGGAGAGTGACGAAGAAGAGGACGAAGACGACGAGGTCCTTGACGAGGAAGTGAACT ATTGAATTTGAAGCTTATTCCATCTCAGATAATGATTATGACGGAATTAAGAAATTACTAG CAGCAGCTTTTCCTAAAGGCTCCTGTGAACACTGCAGAACTAACAGATCTCTTAATTCATA CAGAACCATATTGGAAGTGTGAATTTGAAGCTTAAGCAAACAAATGTTTCAGAAGACAGCG ATGATGATGATGCAGATGAAGATGAAATTTTTGGTTTCATAAGCCTTTTAAATTTAACTGA AAGAAAGGTACCCAGTGTGCTGAACAAATTAAAGAGTTGGTATTTGAAGCGGGTGAGAAGA ACTGTAAAGAATTTGAAGCGGCAGCTGGACAAGCTTTTAAATGACACCACCAAGCCTGTGG GCTTTCTCCTAAGTGAAAGATTCATTAATGTCCCTCCTCAGATTGCTCTGCCCATGCACCA GCAGCTTCAGAAAGAATTTGAAGCAATTTGAAGCCTAGTATTTGAAGCTTCTACCTTCTGA GACCCCGTCCGGCACGACGACGAAGAAGGGGAGGATGAAGTCGAGGATGAAGACGAAGATC GATGAGGAGAGTGACGAAGAAGAGGATTTGAAGCACGAAGACGACGAGGTCCTTGACGAGG AAGTGAATATTGAATTTGAAGCTTATTCCATCTCAGATAATGATTATGACGGAATTAAGAA ATTACTGCAGCAATTTGAAGCAAAGGCTCCTGTGAACACTGCAGATTTGAAGCAACTAACA ATTCAACAGAACCATATTGGAAGTGTGATTAAGCAAACAAATGTTTCAGAAGACAGCGATG ATGATGATGCATTTGAAGCAGATGAAGATGAAATTTTTGGTTTCATAAGCCTTTTAAATTT CTAATAAGCCATGTGGGAAGTGCTCTTTCTACCTTATTTGAAGCACACCATTTGTGGAAGA ATTACTGCAGCAATTTGAAGCAAAGGCTCCTGTGAACACTGCAGATTTGAAGCAACTAACA

    What is the course about?


    Example #1 of a data analysis problem
    CAGCATATTTGAAGCCGGGCCCACACACAATTGGGGAACGGATCCCCGCGGCCTCCCGGCA GACCCCGTCCGGCACGACGACGAAGAAGGGGAGGATGAAGTCGAATTTGAAGCGGATGAAG GATGAGGAGAGTGACGAAGAAGAGGACGAAGACGACGAGGTCCTTGACGAGGAAGTGAACT ATTGAATTTGAAGCTTATTCCATCTCAGATAATGATTATGACGGAATTAAGAAATTACTAG CAGCAGCTTTTCCTAAAGGCTCCTGTGAACACTGCAGAACTAACAGATCTCTTAATTCATA CAGAACCATATTGGAAGTGTGAATTTGAAGCTTAAGCAAACAAATGTTTCAGAAGACAGCG ATGATGATGATGCAGATGAAGATGAAATTTTTGGTTTCATAAGCCTTTTAAATTTAACTGA AAGAAAGGTACCCAGTGTGCTGAACAAATTAAAGAGTTGGTATTTGAAGCGGGTGAGAAGA ACTGTAAAGAATTTGAAGCGGCAGCTGGACAAGCTTTTAAATGACACCACCAAGCCTGTGG GCTTTCTCCTAAGTGAAAGATTCATTAATGTCCCTCCTCAGATTGCTCTGCCCATGCACCA GCAGCTTCAGAAAGAATTTGAAGCAATTTGAAGCCTAGTATTTGAAGCTTCTACCTTCTGA GACCCCGTCCGGCACGACGACGAAGAAGGGGAGGATGAAGTCGAGGATGAAGACGAAGATC GATGAGGAGAGTGACGAAGAAGAGGATTTGAAGCACGAAGACGACGAGGTCCTTGACGAGG AAGTGAATATTGAATTTGAAGCTTATTCCATCTCAGATAATGATTATGACGGAATTAAGAA ATTACTGCAGCAATTTGAAGCAAAGGCTCCTGTGAACACTGCAGATTTGAAGCAACTAACA ATTCAACAGAACCATATTGGAAGTGTGATTAAGCAAACAAATGTTTCAGAAGACAGCGATG ATGATGATGCATTTGAAGCAGATGAAGATGAAATTTTTGGTTTCATAAGCCTTTTAAATTT CTAATAAGCCATGTGGGAAGTGCTCTTTCTACCTTATTTGAAGCACACCATTTGTGGAAGA ATTACTGCAGCAATTTGAAGCAAAGGCTCCTGTGAACACTGCAGATTTGAAGCAACTAACA

    What is the course about?


    Example #2 of a data analysis problem
    10 73 10 3 8 21 21 4 21 21 10 18 8 10 2 21 21 21 45 21

    10

    What is the course about?


    Examples #3-4 of data analysis problems

    11

    What is the course about?


    (1) Programming in Matlab

    (2) Tackling data analysis problems with Matlab


    (3) Learn how to learn Matlab by yourself

    12

    Why Matlab?

    Easy to learn
    Easy to debug

    Great tool for scientific work


    Exploring your data Visualizing your data

    Many useful toolboxes

    13

    Matlabs main disadvantage

    Its slower than other programming languages.

    (unless you use the compiler)

    14

    Background - computers
    Output

    Input
    15

    Background - hardware
    CPU
    Memory

    16

    Background - software
    High level languages

    Examples:

    C, C++, C#, Java, Pascal, Perl, Lisp, Matlab Low level language Example: Assembly Machine language

    Example: 0111010101111101
    Another important player: The operating system

    17

    The Matlab environment


    First we need to Open Matlab

    18

    The Matlab environment


    Opening/saving a file

    Changing current directory

    Prompt / Command line

    Files and Directories inside the current directory

    The command window

    workspace
    19

    Matlab can be used as a calculator

    20

    Our first command


    Writing a command in the command line

    21

    Our first script (M-file)


    (1) Writing the script (2) Saving the script
    o

    Comments start with a % (3) Defining script name (4) Running the script

    22

    Making errors

    This command does NOT exist in Matlab!

    Pressing here will bring you to the line in the script where the error occurred

    23

    Another script
    Making sophisticated graphics and animation in Matlab is easy. We will learn how to do this in two lectures
    Peaks

    Z = peaks; surf(Z); axis tight set(gca,'nextplot','replacechildren'); % Record the movie for j = 1:20 surf(sin(2*pi*j/20)*Z,Z) F(j) = getframe; end % Play the movie twenty times movie(F,20)
    5

    -5

    2 0 -2 y -3 -2 -1 x 0 1 2

    24

    Help!!!

    help doc

    Example: doc disp

    Google

    25

    Matlab toolboxes

    26

    Introduction to Matlab & Data Analysis

    The Matlab Building Blocks - Variables, Arrays and Matrices

    Topic #2:

    Eran Eden, Weizmann 2008

    27

    identifiers

    Identifiers are all the words that build up the program An identifier is a sequence of letters, digits and underscores _ Maximal length of identifiers is 63 characters Cant start with a digit Cant be a reserved word Examples of illegal identifiers: 007bond #time ba-baluba if while
    28

    Examples of Legal identifiers: time day_of_the_week bond007 findWord

    An overview of the main players in a program


    Identifiers

    Reserved words

    Library functions

    Constants

    Variables

    User defined functions

    29

    Reserved words (keywords)

    Words that are part of the Matlab language

    There are 17 reserved words:


    for function otherwise try break end return switch catch

    if elseif continue global while case else persistent

    Do NOT try to redefine their meaning! Don NOT try to redefine their library function names either!

    30

    Constants

    The value of a constant is fixed and does not change throughout the program
    Chars
    c

    Numbers
    100 0.3

    Strings Arrays
    [12345] I like to eat sushi 1 + 2

    Matrices
    [5 3 4 2]
    31

    Variables

    Why do we need variables?

    Computer memory
    salary 9000

    constant
    new_salary

    Example:

    27000

    variable

    >> salary = 9000; >> new_salary = salary * 3; >> disp(new_salary); 27000


    Library functions

    If we update salary, new_salary will NOT be updated automatically


    32

    Variables

    Another example:

    The Matlab Console price_bamba = 3

    price_bamba = 3

    What happens if you omit the ; ?

    33

    Variables

    Another example:

    The Matlab Console price_bamba = 3

    price_bamba = 3 n_bamba = 2; What happens when we add the ; ?

    34

    Variables

    Another example:
    = = = = 3 2; 5 3;

    The Matlab Console price_bamba = 3 price_bisly = 5

    price_bamba n_bamba price_bisly n_bisly

    total_price = 21
    n_bamba = 5

    total_price = 21

    How can we fix it?

    35

    Redefine total_price total_price = price_bamba * n_bamba + price_bisly * n_bisly n_bamba = 5 total_price

    Variables

    Tip #1: Give your variable meaningful names.


    a = 9000 b = 100

    are a bad choice for naming variables that store your working hours and salary! A more meaningful choice of names would
    salary = 9000; hours = 5;

    36

    Variables

    Tip #2: Dont make variable names too long


    salary_I_got_for_my_work_at_the_gasoline_station = 9000; salary_I_got_for_my_work_in_the_bakery = salary_I_got_for_my_work_at_the_gasoline_station * 3; disp(salary_I_got_for_my_work_in_the_bakery);

    Very bad choice of variable name!!!


    When should I use capital letters ? Tip #3: Whatever you do - be consistent.

    37

    Variables Types

    Each variable has a type Why do we need variable types?

    Different types of variable store different types of data


    >> a = 10 a = 10 >> class(a) ans = double

    Returns the type of a variable


    The default variable type in Matlab is double
    38

    Variables Types

    Each variable has a type Why do we need variable types?

    Different types of variable store different types of data


    >> a = 10 a = 10 >> class(a) ans = double >> b = 10.56 b = 10.5600 >> class(b) ans = double >> c = 'Bush' c = Bush >> class(c) ans = char >> d = true d = 1 >> class(d) ans = logical
    39

    Variables Types

    Different variable types require different memory allocations


    >> a = 10.4 %double requires 8 bytes a = 10.4 1 2
    1 0 1 1 1 0 0 0

    3
    0 0 0 0 1 0 0 0

    8
    1 0 0 0 1 0 0 0

    1 0 0 0 1 1 0 0

    >> b = 'B' b = B 1

    %char requires 2 bytes Memory allocation and release is done automatically in Matlab

    2
    1 0 1 1 1 0 0 0

    1 0 0 0 1 1 0 0

    How many bytes are required to store this variable: c = 'Bush' ?

    40

    Computer precision limitations


    How much is: >> 0.42 + 0.08 - 0.5 ans = 0

    How much is: >> 0.42 - 0.5 + 0.08 ans = -1.3878e-017

    41

    Special variables

    ans

    >> 4 * 5 ans = 20 >> ans + 1 ans = 21

    42

    Special variables

    ans pi inf

    >> 2 * inf ans = Inf >> 1 / 0 Warning: Divide by zero. ans = Inf

    43

    Special variables

    ans pi >> NaN + 1 inf ans = NaN NaN In the tutorial youll see more

    >> 0 / 0 Warning: Divide by zero. ans = NaN

    44

    Summary

    Matlab is a high level language


    Matlab working environment Variables & variable types + how to use them

    45

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