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SIAM Journal on Scientific Computing, Volume 38
Volume 38, Number 1, 2016
- Liqian Peng, Kamran Mohseni:
Symplectic Model Reduction of Hamiltonian Systems. - Jie Shen
, Yingwei Wang, Jianlin Xia:
Fast Structured Direct Spectral Methods for Differential Equations with Variable Coefficients, I. The One-Dimensional Case. - Lina Meinecke, Stefan Engblom
, Andreas Hellander
, Per Lötstedt:
Analysis and Design of Jump Coefficients in Discrete Stochastic Diffusion Models. - Mathea J. Vuik, Jennifer K. Ryan
:
Automated Parameters for Troubled-Cell Indicators Using Outlier Detection. - Ruihan Guo, Yan Xu
:
Local Discontinuous Galerkin Method and High Order Semi-Implicit Scheme for the Phase Field Crystal Equation. - Michal Kocvara
, Daniel Loghin, James Turner:
Constraint Interface Preconditioning for Topology Optimization Problems. - Bangti Jin, Raytcho D. Lazarov
, Zhi Zhou
:
Two Fully Discrete Schemes for Fractional Diffusion and Diffusion-Wave Equations with Nonsmooth Data. - Olivier Bokanowski, Maurizio Falcone
, Smita Sahu
:
An Efficient Filtered Scheme for Some First Order Time-Dependent Hamilton-Jacobi Equations. - Samuel Herrmann
, Etienne Tanré
:
The First-passage Time of the Brownian Motion to a Curved Boundary: an Algorithmic Approach. - Roman Andreev:
Wavelet-In-Time Multigrid-In-Space Preconditioning of Parabolic Evolution Equations. - Alen Alexanderian
, Noemi Petra, Georg Stadler, Omar Ghattas:
A Fast and Scalable Method for A-Optimal Design of Experiments for Infinite-dimensional Bayesian Nonlinear Inverse Problems. - Yinnian He, Yan Zhang, Hui Xu
, Zhangxin Chen
:
First-Order Decoupled Finite Element Method of the three-Dimensional Primitive Equations of the Ocean. - Kirk M. Soodhalter
:
Block Krylov Subspace Recycling for Shifted Systems with Unrelated Right-Hand Sides. - Jennifer Pestana
, Richard L. Muddle, Matthias Heil, Françoise Tisseur
, Milan D. Mihajlovic:
Efficient Block Preconditioning for a C1 Finite Element Discretization of the Dirichlet Biharmonic Problem. - Christoph Ortner
, Lei Zhang
:
Atomistic/Continuum Blending with Ghost Force Correction. - Håkan T. Johansson
, Christian Forssén
:
Fast and Accurate Evaluation of Wigner 3j, 6j, and 9j Symbols Using Prime Factorization and Multiword Integer Arithmetic. - Yeonjong Shin
, Dongbin Xiu:
Nonadaptive Quasi-Optimal Points Selection for Least Squares Linear Regression. - Laurent Gosse
, Nicolas Vauchelet
:
Numerical High-Field Limits in Two-Stream Kinetic Models and 1D Aggregation Equations. - Andreas Karageorghis
, C. S. Chen, Xiao-Yan Liu:
Kansa-RBF Algorithms for Elliptic Problems in Axisymmetric Domains. - Peter Benner
, Patrick Kürschner
, Jens Saak
:
Frequency-Limited Balanced Truncation with Low-Rank Approximations. - Eugene Vecharynski, Chao Yang, Fei Xue:
Generalized Preconditioned Locally Harmonic Residual Method for Non-Hermitian Eigenproblems. - Lei Zhang, Qiang Du
, Zhenzhen Zheng:
Optimization-based Shrinking Dimer Method for Finding Transition States. - Bernardo Cockburn
, Jiguang Shen:
A Hybridizable Discontinuous Galerkin Method for the p-Laplacian. - Miroslav Bacák, Ronny Bergmann
, Gabriele Steidl, Andreas Weinmann:
A Second Order Nonsmooth Variational Model for Restoring Manifold-Valued Images. - Xuan Zhao, Zhimin Zhang:
Superconvergence Points of Fractional Spectral Interpolation. - Martin Storath
, Andreas Weinmann, Michael Unser
:
Exact Algorithms for L1-TV Regularization of Real-Valued or Circle-Valued Signals.
- James H. Adler
, Thomas R. Benson, Eric C. Cyr
, Scott P. MacLachlan, Raymond S. Tuminaro:
Monolithic Multigrid Methods for Two-Dimensional Resistive Magnetohydrodynamics. - Francesca Arrigo
, Michele Benzi
:
Updating and Downdating Techniques for Optimizing Network Communicability. - James H. Adler
, David B. Emerson
, Scott P. MacLachlan, Thomas A. Manteuffel:
Constrained Optimization for Liquid Crystal Equilibria. - Janne M. J. Huttunen
, Mikael J. Turunen
, Juuso T. J. Honkanen
, Juha Töyräs
, Jukka S. Jurvelin:
Estimation of Systematic and Spatially Correlated Components of Random Signals from Repeated Measurements: Application to Contrast Enhanced Computer Tomography Measurements. - Shuai Xue, Hyun-Kyung Lim, James Glimm, Flavio H. Fenton, Elizabeth M. Cherry
:
Sharp Boundary Electrocardiac Simulations. - Luis Ortiz-Gracia, Cornelis W. Oosterlee
:
A Highly Efficient Shannon Wavelet Inverse Fourier Technique for Pricing European Options. - Simon L. Cotter
, Radek Erban:
Error Analysis of Diffusion Approximation Methods for Multiscale Systems in Reaction Kinetics. - Yuantao Cai, Marco Donatelli
, Davide Bianchi
, Ting-Zhu Huang:
Regularization Preconditioners for Frame-Based Image Deblurring with Reduced Boundary Artifacts.
- Nicolas Bock, Matt Challacombe, Laxmikant V. Kalé:
Solvers for O (N) Electronic Structure in the Strong Scaling Limit. - Santiago Badia
, Alberto F. Martín
, Javier Principe
:
Multilevel Balancing Domain Decomposition at Extreme Scales. - Massimo Bernaschi, Mauro Bisson, Carlo Fantozzi
, Carlo Janna:
A Factored Sparse Approximate Inverse Preconditioned Conjugate Gradient Solver on Graphics Processing Units.
Volume 38, Number 2, 2016
- Zlatko Drmac
, Serkan Gugercin
:
A New Selection Operator for the Discrete Empirical Interpolation Method - Improved A Priori Error Bound and Extensions. - Matthias Bolten
, Karsten Kahl, Sonja Sokolovic:
Multigrid Methods for Tensor Structured Markov Chains with Low Rank Approximation. - Prince Chidyagwai
, Scott Ladenheim, Daniel B. Szyld:
Constraint Preconditioning for the Coupled Stokes-Darcy System. - Wai-Sun Don, Zhen Gao, Peng Li, Xiao Wen:
Hybrid Compact-WENO Finite Difference Scheme with Conjugate Fourier Shock Detection Algorithm for Hyperbolic Conservation Laws. - Benedict J. Leimkuhler, Xiaocheng Shang
:
Adaptive Thermostats for Noisy Gradient Systems. - Nicolas Crouseilles, Hélène Hivert, Mohammed Lemou:
Numerical Schemes for Kinetic Equations in the Anomalous Diffusion Limit. Part I: The Case of Heavy-Tailed Equilibrium. - Bor Plestenjak, Michiel E. Hochstenbach
:
Roots of Bivariate Polynomial Systems via Determinantal Representations. - Xianyi Zeng
:
A General Approach to Enhance Slope Limiters in MUSCL Schemes on Nonuniform Rectilinear Grids. - Fei Liu, Lexing Ying:
Recursive Sweeping Preconditioner for the Three-Dimensional Helmholtz Equation. - Chris J. Vogl:
A Curvature-Augmented, REA Approach to the Level Set Method. - Peipei Lu, Xuejun Xu:
A Robust Multilevel Method for the Time-harmonic Maxwell Equation with High Wave Number. - Johannes K. Kraus, Raytcho D. Lazarov
, Maria Lymbery, Svetozar Margenov, Ludmil T. Zikatanov
:
Preconditioning Heterogeneous H(div) Problems by Additive Schur Complement Approximation and Applications. - Roel Matthysen, Daan Huybrechs:
Fast Algorithms for the Computation of Fourier Extensions of Arbitrary Length. - Jeremy E. Kozdon
, Lucas C. Wilcox:
Stable Coupling of Nonconforming, High-Order Finite Difference Methods. - David Cohen
, Olivier Verdier
:
MultiSymplectic Discretization of Wave Map Equations. - Xue Jiang, Peijun Li, Weiying Zheng:
Eddy Current Model for Nondestructive Evaluation with Thin Cracks. - Hans De Sterck
, Alexander J. M. Howse:
Nonlinearly Preconditioned Optimization on Grassmann Manifolds for Computing Approximate Tucker Tensor Decompositions. - Matthias Kirchhart
, Sven Groß
, Arnold Reusken:
Analysis of an XFEM Discretization for Stokes Interface Problems. - Olivier Zahm
, Anthony Nouy:
Interpolation of Inverse Operators for Preconditioning Parameter-Dependent Equations. - Milana Gataric
, Clarice Poon:
A Practical Guide to the Recovery of Wavelet Coefficients from Fourier Measurements. - Amir Averbuch, Gil Shabat, Yoel Shkolnisky:
Direct Inversion of the Three-Dimensional Pseudo-polar Fourier Transform. - Sara N. Pollock
:
An Improved Method for Solving Quasi-linear Convection Diffusion Problems on a Coarse Mesh. - Jesse Chan
, Timothy C. Warburton
:
Orthogonal Bases for Vertex-Mapped Pyramids. - Kenneth Duru
:
The Role of Numerical Boundary Procedures in the Stability of Perfectly Matched Layers. - Roland Glowinski, Shingyu Leung
, Jianliang Qian:
Operator-Splitting Based Fast Sweeping Methods for Isotropic Wave Propagation in a Moving Fluid. - Leevan Ling
:
A Fast Block-Greedy Algorithm for Quasi-optimal Meshless Trial Subspace Selection.
- Tsung-Ming Huang, Wen-Wei Lin, Volker Mehrmann:
A Newton-Type Method with Nonequivalence Deflation for Nonlinear Eigenvalue Problems Arising in Photonic Crystal Modeling. - Olivier Bodart
, Valérie Cayol
, Sébastien Court, Jonas Koko:
XFEM-Based Fictitious Domain Method for Linear Elasticity Model with Crack. - Ngoc Cuong Nguyen
, Han Men, Robert M. Freund, Jaume Peraire:
Functional Regression for State Prediction Using Linear PDE Models and Observations. - Michael A. Hansen, James C. Sutherland:
Pseudotransient Continuation for Combustion Simulation with Detailed Reaction Mechanisms. - David Amsallem, Jan Nordström
:
Energy Stable Model Reduction of Neurons by Nonnegative Discrete Empirical Interpolation. - Kazufumi Ito, A. K. Landi:
The Nonnegative Matrix Factorization: Regularization and Complexity.
- Fande Kong, Xiao-Chuan Cai:
A Highly Scalable Multilevel Schwarz Method with Boundary Geometry Preserving Coarse Spaces for 3D Elasticity Problems on Domains with Complex Geometry. - Florian Schornbaum, Ulrich Rüde
:
Massively Parallel Algorithms for the Lattice Boltzmann Method on NonUniform Grids.
Volume 38, Number 3, 2016
- Kody J. H. Law, Hamidou Tembine
, Raúl Tempone
:
Deterministic Mean-Field Ensemble Kalman Filtering. - Mounir Bennoune, Jérôme Morin-Drouin, Robert G. Owens
:
On the Jump Conditions for an Immersed Interface Method. - Alastair Gregory, Colin J. Cotter
, Sebastian Reich:
Multilevel Ensemble Transform Particle Filtering. - Huadong Gao
, Weiwei Sun
:
A New Mixed Formulation and Efficient Numerical Solution of Ginzburg-Landau Equations Under the Temporal Gauge. - James Vogel, Jianlin Xia
, Stephen Cauley, Venkataramanan Balakrishnan
:
Superfast Divide-and-Conquer Method and Perturbation Analysis for Structured Eigenvalue Solutions. - Yidu Yang, Hai Bi, Hao Li, Jiayu Han:
Mixed Methods for the Helmholtz Transmission Eigenvalues. - Sanghyun Lee
, Young-Ju Lee, Mary F. Wheeler:
A Locally Conservative Enriched Galerkin Approximation and Efficient Solver for Elliptic and Parabolic Problems. - Hong Zhang, Adrian Sandu, Sébastien Blaise:
High Order Implicit-explicit General Linear Methods with Optimized Stability Regions. - Danny C. Sorensen, Mark Embree:
A DEIM Induced CUR Factorization. - Orazio Muscato, Wolfgang Wagner:
A Class of Stochastic Algorithms for the Wigner Equation. - Daniele Boffi, Michele Botti
, Daniele A. Di Pietro
:
A Nonconforming High-Order Method for the Biot Problem on General Meshes. - Natalie N. Beams
, Luke N. Olson, Jonathan B. Freund:
A Finite Element Based P3M Method for N-Body Problems. - Jan Nordström
, Tomas Lundquist:
Summation-By-Parts in Time: The Second Derivative. - Dante Kalise
, Axel Kröner, Karl Kunisch:
Local Minimization Algorithms for Dynamic Programming Equations. - Michael P. Friedlander, Ives Macêdo
:
Low-Rank Spectral Optimization via Gauge Duality. - Marco Caliari, Peter Kandolf
, Alexander Ostermann
, Stefan Rainer:
The Leja Method Revisited: Backward Error Analysis for the Matrix Exponential. - Nicola Guglielmi:
On the Method by Rostami for Computing the Real Stability Radius of Large and Sparse Matrices. - Mark Ainsworth, Manuel A. Sánchez:
Computing the Bézier Control Points of the Lagrangian Interpolant in Arbitrary Dimension. - Jizu Huang, Chao Yang
, Xiao-Chuan Cai:
A Nonlinearly Preconditioned Inexact Newton Algorithm for Steady State Lattice Boltzmann Equations. - Sheng-Gwo Chen, Jyh-Yang Wu:
Discrete Conservation Laws on Evolving Surfaces. - Andreas Rademacher
:
NCP Function-Based Dual Weighted Residual Error Estimators for Signorini's Problem. - Sivaram Ambikasaran
, Carlos Borges
, Lise-Marie Imbert-Gérard, Leslie Greengard
:
Fast, Adaptive, High-Order Accurate Discretization of the Lippmann-Schwinger Equation in Two Dimensions. - M. Ableidinger, Evelyn Buckwar
:
Splitting Integrators for the Stochastic Landau-Lifshitz Equation. - Jirí Kopal, Miroslav Rozlozník
, Miroslav Tuma
:
Factorized Approximate Inverses with Adaptive Dropping. - Anaïs Crestetto, Fabrice Deluzet, Claudia Negulescu:
A Hybrid Method for Anisotropic Elliptic Problems Based on the Coupling of an Asymptotic-Preserving Method with the Asymptotic Limit Model. - Debojyoti Ghosh
, Emil M. Constantinescu
:
Semi-implicit Time Integration of Atmospheric Flows with Characteristic-Based Flux Partitioning. - Yu-Wen Li
, Xinyuan Wu:
Exponential Integrators Preserving First Integrals or Lyapunov Functions for Conservative or Dissipative Systems. - Nicole Spillane:
An Adaptive MultiPreconditioned Conjugate Gradient Algorithm.
- Mauricio J. Del Razo
, Yoichi Morofuji
, James S. Meabon, B. Russell Huber, Elaine R. Peskind, William A. Banks, Pierre D. Mourad, Randall J. LeVeque, David G. Cook:
Computational and In Vitro Studies of Blast-Induced Blood-Brain Barrier Disruption. - Zecheng Gan
, Shidong Jiang
, Erik Luijten, Zhenli Xu:
A Hybrid Method for Systems of Closely Spaced Dielectric Spheres and Ions. - Marylesa Howard, Michael Fowler, Aaron Luttman
, Stephen E. Mitchell, Margaret C. Hock
:
Bayesian Abel Inversion in Quantitative X-Ray Radiography. - Xiaowei Zhang, Li Cheng, Delin Chu, Li-Zhi Liao, Michael K. Ng, Roger C. E. Tan:
Incremental Regularized Least Squares for Dimensionality Reduction of Large-Scale Data. - Antti H. Niemi
:
Benchmark Computations of Stresses in a Spherical Dome with Shell Finite Elements. - Kailiang Wu
, Huazhong Tang:
A Direct Eulerian GRP Scheme for Spherically Symmetric General Relativistic Hydrodynamics.
- Megan E. Farquhar
, Timothy J. Moroney
, Qianqian Yang
, Ian W. Turner
:
GPU Accelerated Algorithms for Computing Matrix Function Vector Products with Applications to Exponential Integrators and Fractional Diffusion. - Jack Lee
, Andrew N. Cookson
, Ishani Roy, Eric Kerfoot
, Liya Asner, Guillermo Vigueras
, T. Sochi, Simone Deparis
, Christian Michler, Nicolas P. Smith, David A. Nordsletten
:
Multiphysics Computational Modeling in CHeart. - Brian Drawert, Michael Trogdon, Salman Zubair Toor, Linda R. Petzold, Andreas Hellander
:
MOLNs: A Cloud Platform for Interactive, Reproducible, and Scalable Spatial Stochastic Computational Experiments in Systems Biology Using PyURDME. - Grey Ballard
, Christopher M. Siefert, Jonathan J. Hu:
Reducing Communication Costs for Sparse Matrix Multiplication within Algebraic Multigrid. - Guillaume Aupy, Julien Herrmann, Paul D. Hovland
, Yves Robert
:
Optimal Multistage Algorithm for Adjoint Computation. - Emmanuel Agullo, Patrick R. Amestoy, Alfredo Buttari
, Abdou Guermouche, Jean-Yves L'Excellent, François-Henry Rouet:
Robust Memory-Aware Mappings for Parallel Multifrontal Factorizations. - Amir Gholami, Dhairya Malhotra, Hari Sundar, George Biros:
FFT, FMM, or Multigrid? A comparative Study of State-Of-the-Art Poisson Solvers for Uniform and Nonuniform Grids in the Unit Cube. - Rolf Krause
, Patrick Zulian
:
A Parallel Approach to the Variational Transfer of Discrete Fields between Arbitrarily Distributed Unstructured Finite Element Meshes.
Volume 38, Number 4, 2016
- Hailiang Liu, Yulong Xing:
An Invariant Preserving Discontinuous Galerkin Method for the Camassa-Holm Equation. - Jason E. Hicken, David C. Del Rey Fernández
, David W. Zingg:
Multidimensional Summation-by-Parts Operators: General Theory and Application to Simplex Elements. - Per-Gunnar Martinsson:
Compressing Rank-Structured Matrices via Randomized Sampling. - Youngsoo Ha, Changho Kim, Hyoseon Yang
, Jungho Yoon:
Sixth-order Weighted Essentially Nonoscillatory Schemes Based on Exponential Polynomials. - Daniel Kressner, Michael Steinlechner, Bart Vandereycken
:
Preconditioned Low-rank Riemannian Optimization for Linear Systems with Tensor Product Structure. - Jonas Ballani, Daniel Kressner:
Reduced Basis Methods: From Low-Rank Matrices to Low-Rank Tensors. - Moritz Schulze Darup
, Martin Mönnigmann
:
Improved Automatic Computation of Hessian Matrix Spectral Bounds. - Alvaro Moraes, Raúl Tempone
, Pedro Vilanova
:
A Multilevel Adaptive Reaction-splitting Simulation Method for Stochastic Reaction Networks. - Alexei Bespalov
, David J. Silvester
:
Efficient Adaptive Stochastic Galerkin Methods for Parametric Operator Equations. - Julian Becerra-Sagredo, Carlos Málaga
, Francisco Mandujano:
Moments Preserving and high-resolution Semi-Lagrangian Advection Scheme. - Jesse Chan
, Tim Warburton
:
A Short Note on a Bernstein-Bezier Basis for the Pyramid. - Martin J. Gander
, Martin Neumüller:
Analysis of a New Space-Time Parallel Multigrid Algorithm for Parabolic Problems. - Andrea Barth, Franz G. Fuchs
:
Uncertainty Quantification for Hyperbolic Conservation Laws with Flux Coefficients Given by Spatiotemporal Random Fields. - Qiya Hu, Haiyang Zhang:
Substructuring Preconditioners for the Systems Arising from Plane Wave Discretization of Helmholtz Equations. - Cécile Piret
:
A Radial Basis Function based Frames Strategy for Bypassing the Runge Phenomenon. - Charles-Edouard Bréhier
, Gilles Vilmart
:
High Order Integrator for Sampling the Invariant Distribution of a Class of Parabolic Stochastic PDEs with Additive Space-Time Noise. - Alexandra Tcheng, Jean-Christophe Nave:
A Fast-marching Algorithm for Nonmonotonically Evolving Fronts. - Sergiy Zhuk, Tigran T. Tchrakian, Stephen Moore, Rodrigo H. Ordóñez-Hurtado, Robert Shorten:
On Source-Term Parameter Estimation for Linear Advection-Diffusion Equations with Uncertain Coefficients. - Jie Shen
, Yingwei Wang:
Müntz-Galerkin Methods and Applications to Mixed Dirichlet-Neumann Boundary Value Problems. - Christopher A. Wong:
Bilinear Quadratures for Inner Products. - Daniele Bigoni
, Allan Peter Engsig-Karup, Youssef M. Marzouk:
Spectral Tensor-Train Decomposition. - Ricardo Delgadillo, Jianfeng Lu
, Xu Yang
:
Gauge-Invariant Frozen Gaussian Approximation Method for the Schrödinger Equation with Periodic Potentials. - Nicolas Crouseilles, Hélène Hivert, Mohammed Lemou:
Numerical Schemes for Kinetic Equations in the Anomalous Diffusion Limit. Part II: Degenerate Collision Frequency. - Yeonjong Shin
, Dongbin Xiu:
Correcting Data Corruption Errors for Multivariate Function Approximation. - Ruipeng Li, Yuanzhe Xi, Eugene Vecharynski, Chao Yang, Yousef Saad
:
A Thick-Restart Lanczos Algorithm with Polynomial Filtering for Hermitian Eigenvalue Problems. - Daniel Ruprecht
, Robert Speck
:
Spectral Deferred Corrections with Fast-wave Slow-wave Splitting. - Silvia Bonettini
, Federica Porta
, Valeria Ruggiero:
A Variable Metric Forward-Backward Method with Extrapolation. - Simon Etter
:
Parallel ALS Algorithm for Solving Linear Systems in the Hierarchical Tucker Representation.
- Yunfeng Xiong, Zhenzhu Chen, Sihong Shao:
An Advective-Spectral-Mixed Method for Time-Dependent Many-Body Wigner Simulations. - Paris Perdikaris, Daniele Venturi, George E. Karniadakis:
Multifidelity Information Fusion Algorithms for High-Dimensional Systems and Massive Data sets. - Lingfei Li
, Gongqiu Zhang
:
Option Pricing in Some Non-Lévy Jump Models. - Weiqiang Chen, Hui Ji
, Yanfei You:
An Augmented Lagrangian Method for ℓ1-Regularized Optimization Problems with Orthogonality Constraints. - Haijian Yang, Chao Yang
, Shuyu Sun
:
Active-Set Reduced-Space Methods with Nonlinear Elimination for Two-Phase Flow Problems in Porous Media. - Arta A. Jamshidi, Warren B. Powell:
A Recursive Local Polynomial Approximation Method Using Dirichlet Clouds and Radial Basis Functions.
- J. E. Bunder
, Anthony J. Roberts, Ioannis G. Kevrekidis:
Accuracy of Patch Dynamics with Mesoscale Temporal Coupling for Efficient Massively Parallel Simulations. - Christoph Riesinger, Tobias Neckel
, Florian Rupp:
Solving Random Ordinary Differential Equations on GPU Clusters using Multiple Levels of Parallelism. - Alex Townsend
, Heather Wilber, Grady B. Wright:
Computing with Functions in Spherical and Polar Geometries I. The Sphere. - Mark F. Adams, Jed Brown
, Matthew G. Knepley
, Ravi Samtaney
:
Segmental Refinement: A Multigrid Technique for Data Locality.
Volume 38, Number 5, 2016
- Stéphane Descombes, Stéphane Lanteri, Ludovic Moya:
Locally Implicit Discontinuous Galerkin Time Domain Method for Electromagnetic Wave Propagation in Dispersive Media Applied to Numerical Dosimetry in Biological Tissues. - Matthew J. Reynolds, Alireza Doostan, Gregory Beylkin:
Randomized Alternating Least Squares for Canonical Tensor Decompositions: Application to A PDE With Random Data. - Charles L. Epstein, Michael O'Neil:
Smoothed Corners and Scattered Waves. - Chunwan Lv
, Chuanju Xu:
Error Analysis of a High Order Method for Time-Fractional Diffusion Equations. - Thomas Dunst, Andreas Prohl:
The Forward-Backward Stochastic Heat Equation: Numerical Analysis and Simulation. - Haijian Yang, Feng-Nan Hwang
, Xiao-Chuan Cai:
Nonlinear Preconditioning Techniques for Full-Space Lagrange-Newton Solution of PDE-Constrained Optimization Problems. - Paul G. Constantine
, Carson Kent, Tan Bui-Thanh
:
Accelerating Markov Chain Monte Carlo with Active Subspaces. - Jianyu Pan, Michael K. Ng, Hong Wang:
Fast Iterative Solvers for Linear Systems Arising from Time-Dependent Space-Fractional Diffusion Equations. - Ralf Zimmermann
, Karen Willcox
:
An Accelerated Greedy Missing Point Estimation Procedure. - Zhimin Peng, Yangyang Xu, Ming Yan
, Wotao Yin:
ARock: An Algorithmic Framework for Asynchronous Parallel Coordinate Updates. - Axel Klawonn
, Martin Kühn
, Oliver Rheinbach
:
Adaptive Coarse Spaces for FETI-DP in Three Dimensions. - Delyan Kalchev
, Chak Shing Lee
, Umberto Villa
, Yalchin Efendiev, Panayot S. Vassilevski:
Upscaling of Mixed Finite Element Discretization Problems by the Spectral AMGe Method. - Kirsty L. Brown, Igor Gejadze, Alison Ramage:
A Multilevel Approach for Computing the Limited-Memory Hessian and its Inverse in Variational Data Assimilation. - Martin J. Gander
, Yingxiang Xu:
Optimized Schwarz Methods for Model Problems with Continuously Variable Coefficients. - Daming Yuan, Juan Cheng, Chi-Wang Shu
:
High Order Positivity-Preserving Discontinuous Galerkin Methods for Radiative Transfer Equations. - Yuanzhe Xi, Yousef Saad
:
Computing Partial Spectra with Least-Squares Rational Filters. - Jiequan Li, Zhifang Du:
A Two-Stage Fourth Order Time-Accurate Discretization for Lax-Wendroff Type Flow Solvers I. Hyperbolic Conservation Laws. - Wanrong Cao, Fanhai Zeng
, Zhongqiang Zhang
, George E. Karniadakis:
Implicit-Explicit Difference Schemes for Nonlinear Fractional Differential Equations with Nonsmooth Solutions. - Jie Du, Chi-Wang Shu
:
A High Order Stable Conservative Method for Solving Hyperbolic Conservation Laws on Arbitrarily Distributed Point Clouds. - Matteo Parsani
, Mark H. Carpenter, Travis C. Fisher, Eric J. Nielsen:
Entropy Stable Staggered Grid Discontinuous Spectral Collocation Methods of any Order for the Compressible Navier-Stokes Equations. - Benjamin Peherstorfer, Karen Willcox
, Max D. Gunzburger:
Optimal Model Management for Multifidelity Monte Carlo Estimation. - Martin J. Gander
, Hui Zhang:
Optimized Schwarz Methods with Overlap for the Helmholtz Equation. - Vít Dolejsí, Alexandre Ern, Martin Vohralík
:
hp-Adaptation Driven by Polynomial-Degree-Robust A Posteriori Error Estimates for Elliptic Problems. - Kui Du:
On Well-Conditioned Spectral Collocation and Spectral Methods by the Integral Reformulation. - Jia Zhao
, Xiaofeng Yang
, Jun Li, Qi Wang:
Energy Stable Numerical Schemes for a Hydrodynamic Model of Nematic Liquid Crystals. - Cun Mu, Yuqian Zhang
, John Wright, Donald Goldfarb:
Scalable Robust Matrix Recovery: Frank-Wolfe Meets Proximal Methods. - Kathrin Smetana
, Anthony T. Patera:
Optimal Local Approximation Spaces for Component-Based Static Condensation Procedures.
- Yat Tin Chow, Kazufumi Ito, Jun Zou:
Analysis on a Nonnegative Matrix Factorization and Its Applications. - Michal Kocvara
, Sudaba Mohammed:
Primal-Dual Interior Point Multigrid Method for Topology Optimization. - Jiangyong Hou, Meilan Qiu, Xiaoming He
, Chaohua Guo, Mingzhen Wei, Baojun Bai:
A Dual-Porosity-Stokes Model and Finite Element Method for Coupling Dual-Porosity Flow and Free Flow. - Gary R. Marple, Alex H. Barnett, Adrianna Gillman
, Shravan K. Veerapaneni:
A Fast Algorithm for Simulating Multiphase Flows Through Periodic Geometries of Arbitrary Shape. - Rony Touma
, Ujjwal Koley, Christian Klingenberg
:
Well-Balanced Unstaggered Central Schemes for the Euler Equations with Gravitation. - Grady I. Lemoine:
Three-Dimensional Mapped-Grid Finite Volume Modeling of Poroelastic-Fluid Wave Propagation. - Saifon Chaturantabut, Christopher A. Beattie, Serkan Gugercin
:
Structure-Preserving Model Reduction for Nonlinear Port-Hamiltonian Systems. - Leonardo Zepeda-Núñez, Hongkai Zhao:
Fast Alternating BiDirectional Preconditioner for the 2D High-Frequency Lippmann-Schwinger Equation. - Athanasios C. Antoulas, Ion Victor Gosea, Antonio Cosmin Ionita:
Model Reduction of Bilinear Systems in the Loewner Framework.
- Patrick Sanan, Sascha M. Schnepp, Dave A. May
:
Pipelined, Flexible Krylov Subspace Methods. - Carsten Burstedde, Johannes Holke
:
A Tetrahedral Space-Filling Curve for Nonconforming Adaptive Meshes. - Ray S. Tuminaro, Mauro Perego, Irina K. Tezaur, Andrew G. Salinger, Stephen F. Price
:
A Matrix Dependent/Algebraic Multigrid Approach for Extruded Meshes with Applications to Ice Sheet Modeling. - Stephan C. Kramer, Johannes Hagemann, Lutz Künneke, Jan Lebert:
Parallel Statistical Multiresolution Estimation for Image Reconstruction. - Emmanuel Agullo, Luc Giraud, Pablo Salas, Mawussi Zounon
:
Interpolation-Restart Strategies for Resilient Eigensolvers. - Nicholas J. Higham, Samuel D. Relton
:
Estimating the Largest Elements of a Matrix.
- Hans De Sterck, Chris Johnson, Lois Curfman McInnes:
Special Section on Two Themes: CSE Software and Big Data in CSE. - Thomas Engels
, Dmitry Kolomenskiy
, Kai Schneider
, Jörn Sesterhenn
:
FluSI: A Novel Parallel Simulation Tool for Flapping Insect Flight Using a Fourier Method with Volume Penalization. - Andrew T. T. McRae
, Gheorghe-Teodor Bercea, Lawrence Mitchell, David A. Ham, Colin J. Cotter
:
Automated Generation and Symbolic Manipulation of Tensor Product Finite Elements. - Miklós Homolya, David A. Ham:
A Parallel Edge Orientation Algorithm for Quadrilateral Meshes. - Y. Wang, Jon Karl Sigurdsson, Paul J. Atzberger
:
Fluctuating Hydrodynamics Methods for Dynamic Coarse-Grained Implicit-Solvent Simulations in LAMMPS. - Paul T. Bauman
, Roy H. Stogner:
GRINS: A Multiphysics Framework Based on the libMesh Finite Element Library. - Martin Berzins, Jacqueline C. Beckvermit, Todd Harman, Andrew Bezdjian, Alan Humphrey, Qingyu Meng, John A. Schmidt, Charles A. Wight:
Extending the Uintah Framework through the Petascale Modeling of Detonation in Arrays of High Explosive Devices. - Robert J. Harrison
, Gregory Beylkin, Florian A. Bischoff, Justus A. Calvin, George I. Fann, Jacob Fosso-Tande, Diego Galindo, Jeff R. Hammond, Rebecca Hartman-Baker
, Judith C. Hill, Jun Jia, Jakob S. Kottmann, Miao-Jung Yvonne Ou, Junchen Pei, Laura E. Ratcliff, Matthew G. Reuter, Adam C. Richie-Halford
, Nichols A. Romero, Hideo Sekino, William A. Shelton, Bryan E. Sundahl, W. Scott Thornton, Edward F. Valeev
, Álvaro Vázquez-Mayagoitia
, Nicholas Vence, Takeshi Yanai, Yukina Yokoi:
MADNESS: A Multiresolution, Adaptive Numerical Environment for Scientific Simulation. - Michael Lange, Lawrence Mitchell, Matthew G. Knepley
, Gerard J. Gorman:
Efficient Mesh Management in Firedrake Using PETSc DMPlex. - Weiqun Zhang, Ann S. Almgren
, Marcus Day
, Tan Nguyen, John Shalf
, Didem Unat
:
BoxLib with Tiling: An Adaptive Mesh Refinement Software Framework. - Ralf Deiterding
, Margarete O. Domingues, Sônia M. Gomes
, Kai Schneider
:
Comparison of Adaptive Multiresolution and Adaptive Mesh Refinement Applied to Simulations of the Compressible Euler Equations. - René Milk
, Stephan Rave
, Felix Schindler:
pyMOR - Generic Algorithms and Interfaces for Model Order Reduction. - Markus Huber, Björn Gmeiner, Ulrich Rüde, Barbara I. Wohlmuth:
Resilience for Massively Parallel Multigrid Solvers. - Janine C. Bennett, Ankit Bhagatwala, Jacqueline H. Chen, Ali Pinar, Maher Salloum, C. Seshadhri:
Trigger Detection for Adaptive Scientific Workflows Using Percentile Sampling. - Nathan Yonkee, James C. Sutherland
:
PoKiTT: Exposing Task and Data Parallelism on Heterogeneous Architectures for Detailed Chemical Kinetics, Transport, and Thermodynamics Calculations. - Stefano Zampini
:
PCBDDC: A Class of Robust Dual-Primal Methods in PETSc. - Eric C. Cyr
, John N. Shadid, Raymond S. Tuminaro:
Teko: A Block Preconditioning Capability with Concrete Example Applications in Navier-Stokes and MHD. - Amanda Bienz
, Robert D. Falgout
, William Gropp, Luke N. Olson, Jacob B. Schroder:
Reducing Parallel Communication in Algebraic Multigrid through Sparsification. - Pieter Ghysels, Xiaoye S. Li, François-Henry Rouet, Samuel Williams
, Artem Napov
:
An Efficient Multicore Implementation of a Novel HSS-Structured Multifrontal Solver Using Randomized Sampling. - Carmen Campos
, José E. Román:
Parallel Krylov Solvers for the Polynomial Eigenvalue Problem in SLEPc. - Karl Rupp, Philippe Tillet, Florian Rudolf, Josef Weinbub
, Andreas Morhammer, Tibor Grasser
, Ansgar Jüngel
, Siegfried Selberherr
:
ViennaCL - Linear Algebra Library for Multi- and Many-Core Architectures. - Léopold Cambier, Pierre-Antoine Absil:
Robust Low-Rank Matrix Completion by Riemannian Optimization. - Michael Steinlechner:
Riemannian Optimization for High-Dimensional Tensor Completion. - Per-Gunnar Martinsson, Sergey Voronin:
A Randomized Blocked Algorithm for Efficiently Computing Rank-revealing Factorizations of Matrices. - Xiao Liu, Jianlin Xia, Maarten V. de Hoop:
Parallel Randomized and Matrix-Free Direct Solvers for Large Structured Dense Linear Systems. - Yuxin Chen, David E. Keyes
, Kody J. H. Law, Hatem Ltaief
:
Accelerated Dimension-Independent Adaptive Metropolis. - Eran Treister
, Javier S. Turek
, Irad Yavneh:
A Multilevel Framework for Sparse Optimization with Application to Inverse Covariance Estimation and Logistic Regression. - Arif M. Khan, Alex Pothen
, Md. Mostofa Ali Patwary, Nadathur Rajagopalan Satish, Narayanan Sundaram, Fredrik Manne, Mahantesh Halappanavar, Pradeep Dubey:
Efficient Approximation Algorithms for Weighted b-Matching. - George M. Slota, Kamesh Madduri
, Sivasankaran Rajamanickam:
Complex Network Partitioning Using Label Propagation. - Tom Peterka, Hadrien Croubois, Nan Li
, Esteban Rangel, Franck Cappello:
Self-Adaptive Density Estimation of Particle Data. - Bo Xiao, George Biros:
Parallel Algorithms for Nearest Neighbor Search Problems in High Dimensions. - Woohyuk Choi, Sumin Hong, Won-Ki Jeong:
Vispark: GPU-Accelerated Distributed Visual COmputing Using Spark. - William B. March, Bo Xiao, Chenhan D. Yu, George Biros:
ASKIT: An Efficient, Parallel Library for High-Dimensional Kernel Summations. - Elizabeth R. Jessup, Pate Motter, Boyana Norris
, Kanika Sood
:
Performance-Based Numerical Solver Selection in the Lighthouse Framework. - James Kestyn, Eric Polizzi, Ping Tak Peter Tang:
Feast Eigensolver for Non-Hermitian Problems.
Volume 38, Number 6, 2016
- Victorita Dolean
, Martin J. Gander
, Walid Kheriji, Felix Kwok
, Roland Masson:
Nonlinear Preconditioning: How to Use a Nonlinear Schwarz Method to Precondition Newton's Method. - Wei Guo, Yingda Cheng:
A Sparse Grid Discontinuous Galerkin Method for High-Dimensional Transport Equations and Its Application to Kinetic Simulations. - Linzhang Lu, Teng Wang, Yueh-Cheng Kuo, Ren-Cang Li
, Wen-Wei Lin:
A Fast Algorithm For Fast Train Palindromic Quadratic Eigenvalue Problems. - Christoph Hofer
, Ulrich Langer
, Ioannis Toulopoulos:
Discontinuous Galerkin Isogeometric Analysis of Elliptic Diffusion Problems on Segmentations with Gaps. - Ole Løseth Elvetun, Bjørn Fredrik Nielsen:
PDE-Constrained Optimization with Local Control and Boundary Observations: Robust Preconditioners. - Sven Groß
, Thomas Ludescher, Maxim A. Olshanskii
, Arnold Reusken:
Robust Preconditioning for XFEM Applied to Time-Dependent Stokes Problems. - Jie Chen:
How Accurately Should I Compute Implicit Matrix-Vector Products When Applying the Hutchinson Trace Estimator? - Gil Ariel, Seong Jun Kim, Richard Tsai:
Parareal Multiscale Methods for Highly Oscillatory Dynamical Systems. - Gennady Y. Kulikov
, Maria V. Kulikova
:
Estimating the State in Stiff Continuous-Time Stochastic Systems within Extended Kalman Filtering. - Simone Cacace, Fabio Camilli
:
A Generalized Newton Method for Homogenization of Hamilton-Jacobi Equations. - Jingya Chang, Yannan Chen, Liqun Qi
:
Computing Eigenvalues of Large Scale Sparse Tensors Arising from a Hypergraph. - Giancarlo Sangalli
, Mattia Tani
:
Isogeometric Preconditioners Based on Fast Solvers for the Sylvester Equation. - Huibin Chang, Yifei Lou
, Michael K. Ng, Tieyong Zeng
:
Phase Retrieval from Incomplete Magnitude Information via Total Variation Regularization. - Tan Bui-Thanh
:
Construction and Analysis of HDG Methods for Linearized Shallow Water Equations. - Maojun Li, Fengyan Li, Zhen Li, Liwei Xu:
Maximum-Principle-Satisfying and Positivity-Preserving High Order Central Discontinuous Galerkin Methods for Hyperbolic Conservation Laws. - Lukas Einkemmer, Alexander Ostermann
:
Overcoming Order Reduction in Diffusion-Reaction Splitting. Part 2: Oblique Boundary Conditions. - Lina Song, Haiyan Su, Xinlong Feng
:
Recovery-Based Error Estimator for Stabilized Finite Element Method for the Stationary Navier-Stokes Problem. - Eric Joseph Hall
, Håkon Hoel
, Mattias Sandberg, Anders Szepessy, Raúl Tempone
:
Computable Error Estimates for Finite Element Approximations of Elliptic Partial Differential Equations with Rough Stochastic Data. - Konstantinos Gourgoulias, Markos A. Katsoulakis
, Luc Rey-Bellet:
Information Metrics For Long-Time Errors in Splitting Schemes For Stochastic Dynamics and Parallel Kinetic Monte Carlo. - Andrea Cangiani
, Emmanuil H. Georgoulis, Irene Kyza
, Stephen Metcalfe:
Adaptivity and Blow-Up Detection for Nonlinear Evolution Problems. - Bogdan Opanchuk, Simon Kiesewetter, Peter D. Drummond
:
Parallel Optimized Sampling for Stochastic Equations. - Juan Kuntz
, Michela Ottobre, Guy-Bart Stan
, Mauricio Barahona
:
Bounding Stationary Averages of Polynomial Diffusions via Semidefinite Programming. - Eduard Bader, Mark Kärcher, Martin A. Grepl, Karen Veroy
:
Certified Reduced Basis Methods for Parametrized Distributed Elliptic Optimal Control Problems with Control Constraints.
- Stephan Schmidt
, Eddie Wadbro
, Martin Berggren:
Large-Scale Three-Dimensional Acoustic Horn Optimization. - J. R. Peterson, Jim E. Morel, Jean C. Ragusa:
Residual Monte Carlo for the One-Dimensional Particle Transport Equation. - Miroslav Kuchta, Magne Nordaas, Joris C. G. Verschaeve, Mikael Mortensen
, Kent-André Mardal
:
Preconditioners for Saddle Point Systems with Trace Constraints Coupling 2D and 1D Domains. - Moritz Lang, Jörg Stelling:
Modular Parameter Identification of Biomolecular Networks. - Edward G. Phillips, John N. Shadid, Eric C. Cyr
, Howard C. Elman, Roger P. Pawlowski:
Block Preconditioners for Stable Mixed Nodal and Edge finite element Representations of Incompressible Resistive MHD.
- Jennifer A. Scott, Miroslav Tuma
:
Preconditioning of Linear Least Squares by Robust Incomplete Factorization for Implicitly Held Normal Equations. - Ariful Azad, Grey Ballard
, Aydin Buluç
, James Demmel, Laura Grigori, Oded Schwartz, Sivan Toledo, Samuel Williams
:
Exploiting Multiple Levels of Parallelism in Sparse Matrix-Matrix Multiplication. - Emmanuel Gobet, José G. López-Salas
, Plamen Turkedjiev, Carlos Vázquez
:
Stratified Regression Monte-Carlo Scheme for Semilinear PDEs and BSDEs with Large Scale Parallelization on GPUs. - Martin Schreiber, Tobias Neckel
, Hans-Joachim Bungartz:
Evaluation of an Efficient Stack-RLE Clustering Concept for Dynamically Adaptive Grids. - Alexander Heinlein
, Axel Klawonn
, Oliver Rheinbach
:
A Parallel Implementation of a Two-Level Overlapping Schwarz Method with Energy-Minimizing Coarse Space Based on Trilinos. - Martin D. Schatz, Robert A. van de Geijn
, Jack Poulson:
Parallel Matrix Multiplication: A Systematic Journey.
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