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John M. Shalf
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- affiliation: Lawrence Berkeley National Laboratory, Berkeley, CA, USA
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2020 – today
- 2024
[c107]Shaikh Arifuzzaman, Hasan S. Arikan, Md Abdul Motaleb Faysal, Maximilian H. Bremer, John Shalf
, Doru Popovici:
Unlocking the Potential: Performance Portability of Graph Algorithms on Kokkos Framework. IPDPS (Workshops) 2024: 526-529- [c106]Jie Li, George Michelogiannakis, Brandon Cook, John Shalf, Yong Chen:
Scheduling and Allocation of Disaggregated Memory Resources in HPC Systems. IPDPS (Workshops) 2024: 1202-1203 - 2023
- [j45]Damian W. I. Rouson, Konrad Hinsen, Jeffrey C. Carver, Irina Tezaur, John Shalf, Rio Yokota, Anshu Dubey:
The 2023 Society for Industrial and Applied Mathematics Conference on Computational Science and Engineering. Comput. Sci. Eng. 25(2): 41-43 (2023) - [j44]Bapi Vinnakota, John M. Shalf:
Modular High-Performance Computing Using Chiplets. Comput. Sci. Eng. 25(6): 39-48 (2023) - [c105]George Michelogiannakis, Yehia Arafa, Brandon Cook, Liang Yuan Dai, Abdel-Hameed A. Badawy, Madeleine Glick, Yuyang Wang, Keren Bergman, John Shalf:
Efficient Intra-Rack Resource Disaggregation for HPC Using Co-Packaged DWDM Photonics. CLUSTER 2023: 158-172 - [c104]Mario Vega, Xiaokun Yang, John Shalf, Doru-Thom Popovici:
Towards a Flexible Hardware Implementation for Mixed-Radix Fourier Transforms. HPEC 2023: 1-7 - [c103]Md Abdul Motaleb Faysal, Maximilian H. Bremer, Cy P. Chan, John Shalf, Shaikh Arifuzzaman:
Fast Parallel Index Construction for Efficient K-truss-based Local Community Detection in Large Graphs. ICPP 2023: 132-141 - [c102]Md Abdul Motaleb Faysal, Maximilian H. Bremer, Shaikh Arifuzzaman, Doru Popovici, John Shalf, Cy P. Chan:
Fast Community Detection in Graphs with Infomap Method using Accelerated Sparse Accumulation. IPDPS Workshops 2023: 601-610 - [i8]George Michelogiannakis, Yehia Arafa, Brandon Cook, Liang Yuan Dai, Abdel-Hameed A. Badawy, Madeleine Glick, Yuyang Wang, Keren Bergman, John Shalf:
Efficient Intra-Rack Resource Disaggregation for HPC Using Co-Packaged DWDM Photonics. CoRR abs/2301.03592 (2023) - 2022
- [j43]James M. Brase, Nancy Campbell, Barbara Helland, Thuc Hoang, Manish Parashar, Michael Rosenfield, James C. Sexton, John Towns, Kathryn M. Mohror, John M. Shalf:
The COVID-19 High-Performance Computing Consortium. Comput. Sci. Eng. 24(1): 78-85 (2022) - [j42]Satoshi Matsuoka, Jens Domke, Mohamed Wahib, Aleksandr Drozd, Andrew A. Chien, Raymond Bair, Jeffrey S. Vetter, John Shalf:
Preparing for the Future - Rethinking Proxy Applications. Comput. Sci. Eng. 24(2): 85-90 (2022) - [j41]George Michelogiannakis, Benjamin Klenk, Brandon Cook, Min Yee Teh, Madeleine Glick, Larry Dennison, Keren Bergman, John Shalf:
A Case For Intra-rack Resource Disaggregation in HPC. ACM Trans. Archit. Code Optim. 19(2): 29:1-29:26 (2022) - [j40]Chao Zhang, Maximilian H. Bremer, Cy P. Chan, John Shalf, Xiaochen Guo:
ASA: Accelerating Sparse Accumulation in Column-wise SpGEMM. ACM Trans. Archit. Code Optim. 19(4): 49:1-49:24 (2022) - [i7]Satoshi Matsuoka, Jens Domke, Mohamed Wahib, Aleksandr Drozd, Ray Bair, Andrew A. Chien, Jeffrey S. Vetter, John Shalf:
Preparing for the Future - Rethinking Proxy Apps. CoRR abs/2204.07336 (2022) - 2021
- [j39]John West, Kathryn M. Mohror, John M. Shalf:
Large-Scale Scientific Computing in the Fight Against COVID-19. Comput. Sci. Eng. 23(1): 89-92 (2021) - [j38]Rollin C. Thomas, Shreyas Cholia, Kathryn M. Mohror, John M. Shalf:
Interactive Supercomputing With Jupyter. Comput. Sci. Eng. 23(2): 93-98 (2021) - [j37]Bradley W. Settlemyer, George Amvrosiadis, Philip H. Carns, Robert B. Ross, Kathryn M. Mohror, John M. Shalf:
It's Time to Talk About HPC Storage: Perspectives on the Past and Future. Comput. Sci. Eng. 23(6): 63-68 (2021) - [j36]Georgios Tzimpragos, Jennifer Volk, Dilip Vasudevan, Nestan Tsiskaridze, George Michelogiannakis, Advait Madhavan, John Shalf, Timothy Sherwood:
Temporal Computing With Superconductors. IEEE Micro 41(3): 71-79 (2021) - [c101]Md Abdul Motaleb Faysal, Shaikh Arifuzzaman, Cy P. Chan, Maximilian H. Bremer, Doru Popovici, John Shalf:
HyPC-Map: A Hybrid Parallel Community Detection Algorithm Using Information-Theoretic Approach. HPEC 2021: 1-8 - [c100]Doru-Thom Popovici, Andrew Canning, Zhengji Zhao, Lin-Wang Wang, John Shalf:
A systematic approach to improving data locality across Fourier transforms and linear algebra operations. ICS 2021: 329-341 - [c99]Tan Nguyen, Erich Strohmaier, John Shalf:
Facilitating CoDesign with Automatic Code Similarity Learning. LLVM-HPC@SC 2021: 50-58 - 2020
- [j35]Madeleine Glick, Nathan C. Abrams, Qixiang Cheng, Min Yee Teh, Yu-Han Hung, Oscar A. Jimenez, Songtao Liu, Yoshitomo Okawachi, Xiang Meng, Leif Johansson, Manya Ghobadi, Larry Dennison, George Michelogiannakis, John Shalf, Alan Y. Liu, John E. Bowers, Alexander L. Gaeta, Michal Lipson, Keren Bergman:
PINE: Photonic Integrated Networked Energy efficient datacenters (ENLITENED Program) [Invited]. JOCN 12(12): 443-456 (2020) - [c98]Georgios Tzimpragos, Dilip Vasudevan, Nestan Tsiskaridze, George Michelogiannakis, Advait Madhavan, Jennifer Volk, John Shalf, Timothy Sherwood:
A Computational Temporal Logic for Superconducting Accelerators. ASPLOS 2020: 435-448 - [c97]Jie Zhang, Gyuyoung Park, David Donofrio, John Shalf, Myoungsoo Jung:
DRAM-Less: Hardware Acceleration of Data Processing with New Memory. HPCA 2020: 287-302 - [c96]Anastasiia Butko, George Michelogiannakis, Samuel Williams, Costin Iancu, David Donofrio, John Shalf, Jonathan Carter, Irfan Siddiqi:
Understanding Quantum Control Processor Capabilities and Limitations through Circuit Characterization. ICRC 2020: 66-75 - [c95]Nicholas Buoncristiani, Sanjana Shah, David Donofrio, John Shalf:
Evaluating the Numerical Stability of Posit Arithmetic. IPDPS 2020: 612-621 - [c94]Chao Zhang, Yuan Zeng, John Shalf, Xiaochen Guo:
RnR: A Software-Assisted Record-and-Replay Hardware Prefetcher. MICRO 2020: 609-621 - [c93]Min Yee Teh, Yu-Han Hung, George Michelogiannakis, Shijia Yan, Madeleine Glick, John Shalf, Keren Bergman:
TAGO: rethinking routing design in high performance reconfigurable networks. SC 2020: 25 - [i6]Anastasiia Butko, Ilyas Turimbetov, George Michelogiannakis, David Donofrio, Didem Unat, John Shalf:
TIGER: Topology-aware Assignment using Ising machines Application to Classical Algorithm Tasks and Quantum Circuit Gates. CoRR abs/2009.10151 (2020)
2010 – 2019
- 2019
- [c92]Anastasiia Butko, George Michelogiannakis, David Donofrio, John Shalf:
TIGER: topology-aware task assignment approach using ising machines. CF 2019: 106-114 - [c91]Anastasiia Butko, George Michelogiannakis, David Donofrio, John Shalf:
Extending classical processors to support future large scale quantum accelerators. CF 2019: 317 - [c90]Dilip P. Vasudevan, George Michelogiannakis, David Donofrio, John Shalf:
PARADISE - Post-Moore Architecture and Accelerator Design Space Exploration Using Device Level Simulation and Experiments. ISPASS 2019: 139-140 - [c89]John Shalf:
HPC Interconnects at the End of Moore's Law. OFC 2019: 1-3 - [c88]George Michelogiannakis, Yiwen Shen, Min Yee Teh, Xiang Meng, Benjamin Aivazi, Taylor L. Groves, John Shalf, Madeleine Glick, Manya Ghobadi, Larry Dennison, Keren Bergman:
Bandwidth steering in HPC using silicon nanophotonics. SC 2019: 41:1-41:25 - [c87]Muhammed Nufail Farooqi, Tan Nguyen, Weiqun Zhang, Ann S. Almgren, John Shalf, Didem Unat:
Asynchronous AMR on Multi-GPUs. ISC Workshops 2019: 113-123 - 2018
- [j34]Myoungsoo Jung, Jie Zhang, Ahmed H. M. O. Abulila, Miryeong Kwon, Narges Shahidi, John Shalf, Nam Sung Kim, Mahmut T. Kandemir:
SimpleSSD: Modeling Solid State Drives for Holistic System Simulation. IEEE Comput. Archit. Lett. 17(1): 37-41 (2018) - [c86]Anastasiia Butko, Albert Chen, David Donofrio, Farzad Fatollahi-Fard, John Shalf:
Open2C: open-source generator for exploration of coherent cache memory subsystems. MEMSYS 2018: 311-317 - [c85]Yusuke Nagasaka, Akira Nukada, Satoshi Matsuoka, Kenichi Miura, John Shalf:
MRG8: Random Number Generation for the Exascale Era. PASC 2018: 6:1-6:11 - [c84]George Michelogiannakis, Benjamin Aivazi, Yiwen Shen, Larry Dennison, John Shalf, Keren Bergman, Madeleine Glick:
Architectural Opportunities and Challenges from Emerging Photonics in Future Systems. PSC 2018: 1-3 - [c83]Muhammed Nufail Farooqi, Tan Nguyen, Weiqun Zhang, Ann S. Almgren, John Shalf, Didem Unat:
Phase asynchronous AMR execution for productive and performant astrophysical flows. SC 2018: 70:1-70:14 - [e2]Rio Yokota, Michèle Weiland, John Shalf, Sadaf R. Alam:
High Performance Computing - ISC High Performance 2018 International Workshops, Frankfurt/Main, Germany, June 28, 2018, Revised Selected Papers. Lecture Notes in Computer Science 11203, Springer 2018, ISBN 978-3-030-02464-2 [contents] - 2017
- [j33]Didem Unat, Anshu Dubey, Torsten Hoefler, John Shalf, Mark James Abraham, Mauro Bianco, Bradford L. Chamberlain, Romain Cledat, H. Carter Edwards, Hal Finkel, Karl Fuerlinger, Frank Hannig, Emmanuel Jeannot, Amir Kamil, Jeff Keasler, Paul H. J. Kelly, Vitus J. Leung, Hatem Ltaief, Naoya Maruyama, Chris J. Newburn, Miquel Pericàs:
Trends in Data Locality Abstractions for HPC Systems. IEEE Trans. Parallel Distributed Syst. 28(10): 3007-3020 (2017) - [c82]George Michelogiannakis, Khaled Z. Ibrahim, John Shalf, Jeremiah J. Wilke, Samuel Knight, Joseph P. Kenny:
APHiD: Hierarchical Task Placement to Enable a Tapered Fat Tree Topology for Lower Power and Cost in HPC Networks. CCGrid 2017: 228-237 - [c81]Muhammed Nufail Farooqi, Didem Unat, Tan Nguyen, Weiqun Zhang, Ann S. Almgren, John Shalf:
Nonintrusive AMR Asynchrony for Communication Optimization. Euro-Par 2017: 682-694 - [c80]Farzad Fatollahi-Fard, David Donofrio, John Shalf, John D. Leidel, Xi Wang, Yong Chen:
OpenSoC system architect: An open toolkit for building soft-cores on FPGAs. FPL 2017: 1 - [c79]George Michelogiannakis, John Shalf:
Last Level Collective Hardware Prefetching For Data-Parallel Applications. HiPC 2017: 72-83 - [c78]Burak Bastem, Didem Unat, Weiqun Zhang, Ann S. Almgren, John Shalf:
Overlapping Data Transfers with Computation on GPU with Tiles. ICPP 2017: 171-180 - [c77]Miryeong Kwon, Jie Zhang, Gyuyoung Park, Wonil Choi, David Donofrio, John Shalf, Mahmut T. Kandemir, Myoungsoo Jung:
TraceTracker: Hardware/software co-evaluation for large-scale I/O workload reconstruction. IISWC 2017: 87-96 - [c76]Dilip P. Vasudevan, George Michelogiannakis, David Donofrio, John Shalf:
CASPER - Configurable design space exploration of programmable architectures for machine learning using beyond moore devices. NANOARCH 2017: 117-118 - [c75]Hang Guan, Sébastien Rumley, Ke Wen, David Donofrio, John Shalf, Keren Bergman:
Reconfigurable Silicon Photonic Interconnect for Many-Core Architecture. ISC Workshops 2017: 89-97 - [c74]Dilip P. Vasudevan, Anastasiia Butko, George Michelogiannakis, David Donofrio, John Shalf:
Towards an Integrated Strategy to Preserve Digital Computing Performance Scaling Using Emerging Technologies. ISC Workshops 2017: 115-123 - [e1]Julian M. Kunkel, Rio Yokota, Michela Taufer, John Shalf:
High Performance Computing - ISC High Performance 2017 International Workshops, DRBSD, ExaComm, HCPM, HPC-IODC, IWOPH, IXPUG, P^3MA, VHPC, Visualization at Scale, WOPSSS, Frankfurt, Germany, June 18-22, 2017, Revised Selected Papers. Lecture Notes in Computer Science 10524, Springer 2017, ISBN 978-3-319-67629-6 [contents] - [i5]Myoungsoo Jung, Jie Zhang, Ahmed H. M. O. Abulila, Miryeong Kwon, Narges Shahidi, John Shalf, Nam Sung Kim, Mahmut T. Kandemir:
SimpleSSD: Modeling Solid State Drives for Holistic System Simulation. CoRR abs/1705.06419 (2017) - [i4]Miryeong Kwon, Jie Zhang, Gyuyoung Park, Wonil Choi, David Donofrio, John Shalf, Mahmut T. Kandemir, Myoungsoo Jung:
TraceTracker: Hardware/Software Co-Evaluation for Large-Scale I/O Workload Reconstruction. CoRR abs/1709.04806 (2017) - 2016
- [j32]Weiqun Zhang, Ann S. Almgren, Marcus Day, Tan Nguyen, John Shalf, Didem Unat:
BoxLib with Tiling: An Adaptive Mesh Refinement Software Framework. SIAM J. Sci. Comput. 38(5) (2016) - [j31]Myoungsoo Jung, Wonil Choi, Shuwen Gao, Ellis Herbert Wilson III, David Donofrio, John Shalf, Mahmut Taylan Kandemir:
NANDFlashSim: High-Fidelity, Microarchitecture-Aware NAND Flash Memory Simulation. ACM Trans. Storage 12(2): 6:1-6:32 (2016) - [c73]Ke Wen, Hang Guan, David M. Calhoun, David Donofrio, John Shalf:
Silicon photonic memory interconnect for many-core architectures. HPEC 2016: 1-7 - [c72]Farzad Fatollahi-Fard, David Donofrio, George Michelogiannakis, John Shalf:
OpenSoC Fabric: On-chip network generator. ISPASS 2016: 194-203 - [c71]Khaled Z. Ibrahim, Farzad Fatollahi-Fard, David Donofrio, John Shalf:
Characterizing the Performance of Hybrid Memory Cube Using ApexMAP Application Probes. MEMSYS 2016: 429-436 - [c70]Tan Nguyen, Didem Unat, Weiqun Zhang, Ann S. Almgren, Muhammed Nufail Farooqi, John Shalf:
Perilla: metadata-based optimizations of an asynchronous runtime for adaptive mesh refinement. SC 2016: 945-956 - [c69]Didem Unat, Tan Nguyen, Weiqun Zhang, Muhammed Nufail Farooqi, Burak Bastem, George Michelogiannakis, Ann S. Almgren, John Shalf:
TiDA: High-Level Programming Abstractions for Data Locality Management. ISC 2016: 116-135 - [i3]Weiqun Zhang, Ann S. Almgren, Marcus Day, Tan Nguyen, John Shalf, Didem Unat:
BoxLib with Tiling: An AMR Software Framework. CoRR abs/1604.03570 (2016) - 2015
- [j30]John M. Shalf, Robert Leland:
Computing beyond Moore's Law. Computer 48(12): 14-23 (2015) - [j29]Didem Unat, Cy P. Chan, Weiqun Zhang, Samuel Williams, John Bachan, John B. Bell, John Shalf:
ExaSAT: An exascale co-design tool for performance modeling. Int. J. High Perform. Comput. Appl. 29(2): 209-232 (2015) - [j28]George Michelogiannakis, Xiaoye S. Li, David H. Bailey, John Shalf:
Extending Summation Precision for Network Reduction Operations. Int. J. Parallel Program. 43(6): 1218-1243 (2015) - [c68]Jie Zhang, David Donofrio, John Shalf, Mahmut T. Kandemir, Myoungsoo Jung:
NVMMU: A Non-volatile Memory Management Unit for Heterogeneous GPU-SSD Architectures. PACT 2015: 13-24 - [c67]Jie Zhang, David Donofrio, John Shalf, Myoungsoo Jung:
Integrating 3D Resistive Memory Cache into GPGPU for Energy-Efficient Data Processing. PACT 2015: 496-497 - [c66]Vilas Sridharan, Nathan DeBardeleben, Sean Blanchard, Kurt B. Ferreira, Jon Stearley, John Shalf, Sudhanva Gurumurthi:
Memory Errors in Modern Systems: The Good, The Bad, and The Ugly. ASPLOS 2015: 297-310 - [c65]Jie Zhang, Gieseo Park, Mustafa M. Shihab, David Donofrio, John Shalf, Myoungsoo Jung:
OpenNVM: An open-sourced FPGA-based NVM controller for low level memory characterization. ICCD 2015: 666-673 - 2014
- [j27]Myoungsoo Jung, Ellis Herbert Wilson III, Wonil Choi, John Shalf, Hasan Metin Aktulga, Chao Yang, Erik Saule, Ümit V. Çatalyürek, Mahmut T. Kandemir:
Exploring the future of out-of-core computing with compute-local non-volatile memory. Sci. Program. 22(2): 125-139 (2014) - [c64]Myoungsoo Jung, Wonil Choi, John Shalf, Mahmut T. Kandemir:
Triple-A: a Non-SSD based autonomic all-flash array for high performance storage systems. ASPLOS 2014: 441-454 - [c63]George Michelogiannakis, Alexander Williams, Samuel Williams, John Shalf:
Collective memory transfers for multi-core chips. ICS 2014: 343-352 - [c62]Farzad Fatollahi-Fard, David Donofrio, George Michelogiannakis, John Shalf:
OpenSoC Fabric: On-Chip Network Generator: Using Chisel to Generate a Parameterizable On-Chip Interconnect Fabric. NoCArc@MICRO 2014: 45-50 - [c61]George Michelogiannakis, John Shalf:
Variable-width datapath for on-chip network static power reduction. NOCS 2014: 96-103 - [c60]James A. Ang, Richard F. Barrett, R. E. Benner, D. Burke, C. Chan, Jeanine E. Cook, David Donofrio, Simon D. Hammond, Karl S. Hemmert, Suzanne M. Kelly, H. Le, Vitus J. Leung, David R. Resnick, Arun F. Rodrigues, John Shalf, Dylan T. Stark, Didem Unat, Nicholas J. Wright:
Abstract machine models and proxy architectures for exascale computing. Co-HPC@SC 2014: 25-32 - 2013
- [j26]Peter M. Kogge, John Shalf:
Exascale Computing Trends: Adjusting to the "New Normal"' for Computer Architecture. Comput. Sci. Eng. 15(6): 16-26 (2013) - [c59]Turlough P. Downes, Sabine Roller, Ari P. Seitsonen, Sophie Valcke, David E. Keyes, Marie-Christine Sawley, Thomas C. Schulthess, John Shalf:
Topic 14+16: High-Performance and Scientific Applications and Extreme-Scale Computing - (Introduction). Euro-Par 2013: 737-738 - [c58]Myoungsoo Jung, John Shalf, Mahmut T. Kandemir:
Design of a large-scale storage-class RRAM system. ICS 2013: 103-114 - [c57]George Michelogiannakis, Xiaoye S. Li, David H. Bailey, John Shalf:
Extending Summation Precision for Network Reduction Operations. SBAC-PAD 2013: 41-48 - [c56]Cy P. Chan, Joseph P. Kenny, Gilbert Hendry, Vincent E. Beckner, John B. Bell, John M. Shalf:
A communications simulation methodology for AMR codes using task dependency analysis. IA3@SC 2013: 11:1-11:4 - [c55]Myoungsoo Jung, Ellis Herbert Wilson, Wonil Choi, John Shalf, Hasan Metin Aktulga, Chao Yang, Erik Saule, Ümit V. Çatalyürek, Mahmut T. Kandemir:
Exploring the future of out-of-core computing with compute-local non-volatile memory. SC 2013: 75:1-75:11 - [c54]Cy P. Chan, Didem Unat, Michael Lijewski, Weiqun Zhang, John B. Bell, John Shalf:
Software Design Space Exploration for Exascale Combustion Co-design. ISC 2013: 196-212 - 2012
- [j25]Hongzhang Shan, Nicholas J. Wright, John Shalf, Katherine A. Yelick, Marcus Wagner, Nathan Wichmann:
A preliminary evaluation of the hardware acceleration of the Cray Gemini interconnect for PGAS languages and comparison with MPI. SIGMETRICS Perform. Evaluation Rev. 40(2): 92-98 (2012) - [c53]Richard F. Barrett, Shekhar Borkar, Sudip S. Dosanjh, Simon D. Hammond, Michael A. Heroux, Xiaobo Sharon Hu, Justin Luitjens, Steven G. Parker, John Shalf, Li Tang:
On the Role of Co-design in High Performance Computing. High Performance Computing Workshop (2) 2012: 141-155 - [c52]Mehmet Balman, Eric Pouyoul, Yushu Yao, E. Wes Bethel, Burlen Loring, Prabhat, John Shalf, Alex Sim, Brian L. Tierney:
Experiences with 100Gbps network applications. DICT@HPDC 2012: 33-42 - [c51]Richard F. Barrett, Xiaobo Sharon Hu, Sudip S. Dosanjh, Steven G. Parker, Michael A. Heroux, John Shalf:
Toward codesign in high performance computing systems. ICCAD 2012: 443-449 - [c50]Myoungsoo Jung, Ellis Herbert Wilson, David Donofrio, John Shalf, Mahmut T. Kandemir:
NANDFlashSim: Intrinsic latency variation aware NAND flash memory system modeling and simulation at microarchitecture level. MSST 2012: 1-12 - [c49]Jatin Chhugani, Changkyu Kim, Hemant Shukla, Jongsoo Park, Pradeep Dubey, John Shalf, Horst D. Simon:
Billion-particle SIMD-friendly two-point correlation on large-scale HPC cluster systems. SC 2012: 1 - [c48]Samuel Williams, Dhiraj D. Kalamkar, Amik Singh, Anand M. Deshpande, Brian van Straalen, Mikhail Smelyanskiy, Ann S. Almgren, Pradeep Dubey, John Shalf, Leonid Oliker:
Optimization of geometric multigrid for emerging multi- and manycore processors. SC 2012: 96 - [c47]John Shalf:
The Analysis of Impact of Energy Efficiency Requirements on Programming Environments. SC Companion 2012: 920-941 - 2011
- [j24]John Shalf, Daniel J. Quinlan, Curtis L. Janssen:
Rethinking Hardware-Software Codesign for Exascale Systems. Computer 44(11): 22-30 (2011) - [j23]Jack J. Dongarra, Peter H. Beckman, Terry Moore, Patrick Aerts, Giovanni Aloisio, Jean-Claude Andre, David Barkai, Jean-Yves Berthou, Taisuke Boku, Bertrand Braunschweig, Franck Cappello, Barbara M. Chapman, Xuebin Chi, Alok N. Choudhary, Sudip S. Dosanjh, Thom H. Dunning, Sandro Fiore, Al Geist, Bill Gropp, Robert J. Harrison, Mark Hereld, Michael A. Heroux, Adolfy Hoisie, Koh Hotta, Zhong Jin, Yutaka Ishikawa, Fred Johnson, Sanjay Kale, Richard Kenway, David E. Keyes, Bill Kramer, Jesús Labarta, Alain Lichnewsky, Thomas Lippert, Bob Lucas, Barney Maccabe, Satoshi Matsuoka, Paul Messina, Peter Michielse, Bernd Mohr, Matthias S. Müller, Wolfgang E. Nagel, Hiroshi Nakashima, Michael E. Papka, Daniel A. Reed, Mitsuhisa Sato, Edward Seidel, John Shalf, David Skinner, Marc Snir, Thomas L. Sterling, Rick Stevens, Frederick H. Streitz, Bob Sugar, Shinji Sumimoto, William M. Tang, John A. Taylor, Rajeev Thakur, Anne E. Trefethen, Mateo Valero, Aad J. van der Steen, Jeffrey S. Vetter, Peg Williams, Robert W. Wisniewski, Katherine A. Yelick:
The International Exascale Software Project roadmap. Int. J. High Perform. Comput. Appl. 25(1): 3-60 (2011) - [c46]Keren Bergman, Gilbert Hendry, Paul Hargrove, John Shalf, Bruce L. Jacob, K. Scott Hemmert, Arun Rodrigues, David R. Resnick:
Let there be light!: the future of memory systems is photonics and 3D stacking. MSPC 2011: 43-48 - [c45]Kamesh Madduri, Khaled Z. Ibrahim, Samuel Williams, Eun-Jin Im, Stéphane Ethier, John Shalf, Leonid Oliker:
Gyrokinetic toroidal simulations on leading multi- and manycore HPC systems. SC 2011: 23:1-23:12 - [c44]Samuel Williams, Leonid Oliker, Jonathan Carter, John Shalf:
Extracting ultra-scale Lattice Boltzmann performance via hierarchical and distributed auto-tuning. SC 2011: 55:1-55:12 - [c43]Jens Krueger, David Donofrio, John Shalf, Marghoob Mohiyuddin, Samuel Williams, Leonid Oliker, Franz-Josef Pfreundt:
Hardware/software co-design for energy-efficient seismic modeling. SC 2011: 73:1-73:12 - [c42]Robert Preissl, Nathan Wichmann, Bill Long, John Shalf, Stéphane Ethier, Alice E. Koniges:
Multithreaded global address space communication techniques for gyrokinetic fusion applications on ultra-scale platforms. SC 2011: 78:1-78:11 - [r1]John Shalf, David Donofrio, Chris Rowen, Leonid Oliker, Michael F. Wehner:
Green Flash: Climate Machine (LBNL). Encyclopedia of Parallel Computing 2011: 809-819 - 2010
- [j22]Shoaib Kamil, Leonid Oliker, Ali Pinar, John Shalf:
Communication Requirements and Interconnect Optimization for High-End Scientific Applications. IEEE Trans. Parallel Distributed Syst. 21(2): 188-202 (2010) - [c41]Lavanya Ramakrishnan, Keith R. Jackson, Shane Canon, Shreyas Cholia, John Shalf:
Defining future platform requirements for e-Science clouds. SoCC 2010: 101-106 - [c40]Keith R. Jackson, Lavanya Ramakrishnan, Krishna Muriki, Shane Canon, Shreyas Cholia, John Shalf, Harvey J. Wasserman, Nicholas J. Wright:
Performance Analysis of High Performance Computing Applications on the Amazon Web Services Cloud. CloudCom 2010: 159-168 - [c39]Gilbert Hendry, Johnnie Chan, Shoaib Kamil, Leonid Oliker, John Shalf, Luca P. Carloni, Keren Bergman:
Silicon Nanophotonic Network-on-Chip Using TDM Arbitration. Hot Interconnects 2010: 88-95 - [c38]James A. Ang, Ron Brightwell, David Donofrio, Sudip S. Dosanjh, K. Scott Hemmert, Arun Rodrigues, John Shalf, Kyle B. Wheeler:
Exascale Computing and the Role of Co-Design. High Performance Computing Workshop 2010: 43-64 - [c37]Shoaib Kamil, Cy P. Chan, Leonid Oliker, John Shalf, Samuel Williams:
An auto-tuning framework for parallel multicore stencil computations. IPDPS 2010: 1-12 - [c36]Andrew Uselton, Mark Howison, Nicholas J. Wright, David Skinner, Noel Keen, John Shalf, Karen L. Karavanic, Leonid Oliker:
Parallel I/O performance: From events to ensembles. IPDPS 2010: 1-11 - [c35]John Shalf, Sudip S. Dosanjh, John Morrison:
Exascale Computing Technology Challenges. VECPAR 2010: 1-25 - [p3]Kaushik Datta, Samuel Williams, Vasily Volkov, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick:
Auto-Tuning Stencil Computations on Multicore and Accelerators. Scientific Computing with Multicore and Accelerators 2010: 219-253
2000 – 2009
- 2009
- [j21]David Donofrio, Leonid Oliker, John Shalf, Michael F. Wehner, Chris Rowen, Jens Krueger, Shoaib Kamil, Marghoob Mohiyuddin:
Energy-Efficient Computing for Extreme-Scale Science. Computer 42(11): 62-71 (2009) - [j20]Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick:
Optimization of a lattice Boltzmann computation on state-of-the-art multicore platforms. J. Parallel Distributed Comput. 69(9): 762-777 (2009) - [j19]Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel:
Optimization of sparse matrix-vector multiplication on emerging multicore platforms. Parallel Comput. 35(3): 178-194 (2009) - [j18]Julian Borrill, Leonid Oliker, John Shalf, Hongzhang Shan, Andrew Uselton:
HPC global file system performance analysis using a scientific-application derived benchmark. Parallel Comput. 35(6): 358-373 (2009) - [j17]Kaushik Datta, Shoaib Kamil, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick:
Optimization and Performance Modeling of Stencil Computations on Modern Microprocessors. SIAM Rev. 51(1): 129-159 (2009) - [c34]Joseph Gebis, Leonid Oliker, John Shalf, Samuel Williams, Katherine A. Yelick:
Improving Memory Subsystem Performance Using ViVA: Virtual Vector Architecture. ARCS 2009: 146-158 - [c33]Brian van Straalen, John Shalf, Terry J. Ligocki, Noel Keen, Woo-Sun Yang:
Scalability challenges for massively parallel AMR applications. IPDPS 2009: 1-12 - [c32]Gilbert Hendry, Shoaib Kamil, Aleksandr Biberman, Johnnie Chan, Benjamin G. Lee, Marghoob Mohiyuddin, Ankit Jain, Keren Bergman, Luca P. Carloni, John Kubiatowicz, Leonid Oliker, John Shalf:
Analysis of photonic networks for a chip multiprocessor using scientific applications. NOCS 2009: 104-113 - [c31]Andrew Canning, John Shalf, Lin-Wang Wang, Harvey J. Wasserman, Manisha Gajbe:
A Comparison of Different Communication Structures for Scalable Parallel Three Dimensional FFTs in First Principles Codes. PARCO 2009: 107-116 - [c30]Kamesh Madduri, Samuel Williams, Stéphane Ethier, Leonid Oliker, John Shalf, Erich Strohmaier, Katherine A. Yelick:
Memory-efficient optimization of Gyrokinetic particle-to-grid interpolation for multicore processors. SC 2009 - [c29]Marghoob Mohiyuddin, Mark Murphy, Leonid Oliker, John Shalf, John Wawrzynek, Samuel Williams:
A design methodology for domain-optimized power-efficient supercomputing. SC 2009 - [p2]Jason Hick, John Shalf:
Storage Technology. Scientific Data Management 2009 - 2008
- [j16]Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, Stéphane Ethier:
Scientific Application Performance On Leading Scalar and Vector Supercomputering Platforms. Int. J. High Perform. Comput. Appl. 22(1): 5-20 (2008) - [j15]Michael F. Wehner, Leonid Oliker, John Shalf:
Towards Ultra-High Resolution Models of Climate and Weather. Int. J. High Perform. Comput. Appl. 22(2): 149-165 (2008) - [c28]Shoaib Kamil, John Shalf, Erich Strohmaier:
Power efficiency in high performance computing. IPDPS 2008: 1-8 - [c27]Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick:
Lattice Boltzmann simulation optimization on leading multicore platforms. IPDPS 2008: 1-14 - [c26]Kaushik Datta, Mark Murphy, Vasily Volkov, Samuel Williams, Jonathan Carter, Leonid Oliker, David A. Patterson, John Shalf, Katherine A. Yelick:
Stencil computation optimization and auto-tuning on state-of-the-art multicore architectures. SC 2008: 4 - [c25]Hongzhang Shan, Katie Antypas, John Shalf:
Characterizing and predicting the I/O performance of HPC applications using a parameterized synthetic benchmark. SC 2008: 42 - 2007
- [j14]Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick:
Scientific Computing Kernels on the Cell Processor. Int. J. Parallel Program. 35(3): 263-298 (2007) - [c24]Shoaib Kamil, Ali Pinar, Daniel K. Gunter, Michael Lijewski, Leonid Oliker, John Shalf:
Reconfigurable hybrid interconnection for static and dynamic scientific applications. Conf. Computing Frontiers 2007: 183-194 - [c23]Leonid Oliker, Andrew Canning, Jonathan Carter, Costin Iancu, Michael Lijewski, Shoaib Kamil, John Shalf, Hongzhang Shan, Erich Strohmaier, Stéphane Ethier, Tom Goodale:
Scientific Application Performance on Candidate PetaScale Platforms. IPDPS 2007: 1-12 - [c22]Julian Borrill, Leonid Oliker, John Shalf, Hongzhang Shan:
Investigation of leading HPC I/O performance using a scientific-application derived benchmark. SC 2007: 10 - [c21]Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel:
Optimization of sparse matrix-vector multiplication on emerging multicore platforms. SC 2007: 38 - [i2]Erik Schnetter, Christian D. Ott, Gabrielle Allen, Peter Diener, Tom Goodale, Thomas Radke, Edward Seidel, John Shalf:
Cactus Framework: Black Holes to Gamma Ray Bursts. CoRR abs/0707.1607 (2007) - 2006
- [c20]Shoaib Kamil, Kaushik Datta, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick:
Implicit and explicit optimizations for stencil computations. Memory System Performance and Correctness 2006: 51-60 - [c19]Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick:
The potential of the cell processor for scientific computing. Conf. Computing Frontiers 2006: 9-20 - [c18]Luke J. Gosink, John Shalf, Kurt Stockinger, Kesheng Wu, Wes Bethel:
HDF5-FastQuery: Accelerating Complex Queries on HDF Datasets using Fast Bitmap Indices. SSDBM 2006: 149-158 - [c17]Jonathan Carter, Leonid Oliker, John Shalf:
Performance Evaluation of Scientific Applications on Modern Parallel Vector Systems. VECPAR 2006: 490-503 - 2005
- [j13]Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, David Skinner, Stéphane Ethier, Rupak Biswas, M. Jahed Djomehri, Rob F. Van der Wijngaart:
Performance evaluation of the SX-6 vector architecture for scientific computations. Concurr. Pract. Exp. 17(1): 69-93 (2005) - [j12]Ruxandra Bondarescu, Gabrielle Allen, Greg Daues, Ian Kelley, Michael Russell, Edward Seidel, John Shalf, Malcolm Tobias:
The Astrophysics Simulation Collaboratory Portal: a framework for effective distributed research. Future Gener. Comput. Syst. 21(2): 259-270 (2005) - [c16]Shoaib Kamil, Parry Husbands, Leonid Oliker, John Shalf, Katherine A. Yelick:
Impact of modern memory subsystems on cache optimizations for stencil computations. Memory System Performance 2005: 36-43 - [c15]John Shalf, Shoaib Kamil, Leonid Oliker, David Skinner:
Analyzing Ultra-Scale Application Communication Requirements for a Reconfigurable Hybrid Interconnect. SC 2005: 17 - [c14]Kurt Stockinger, John Shalf, E. Wes Bethel, Kesheng Wu:
DEX: Increasing the Capability of Scientific Data Analysis Pipelines by Using Efficient Bitmap Indices to Accelerate Scientific Visualization. SSDBM 2005: 35-44 - [c13]Kurt Stockinger, John Shalf, Kesheng Wu, E. Wes Bethel:
Query-Driven Visualization of Large Data Sets. IEEE Visualization 2005: 167-174 - [p1]Wes Bethel, John Shalf:
Consuming Network Bandwidth with Visapult. The Visualization Handbook 2005: 569-589 - 2004
- [c12]Gorden Griem, Leonid Oliker, John Shalf, Katherine A. Yelick:
Identifying Performance Bottlenecks on Modern Microarchitectures Using an Adaptable Probe. IPDPS 2004 - [c11]Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, Stéphane Ethier:
Scientific Computations on Modern Parallel Vector Systems. SC 2004: 10 - 2003
- [j11]John Shalf, E. Wes Bethel:
The Grid and Future Visualization System Architectures. IEEE Computer Graphics and Applications 23(2): 6-9 (2003) - [j10]T. J. Jankun-Kelly, Oliver Kreylos, Kwan-Liu Ma, Bernd Hamann, Kenneth I. Joy, John Shalf, E. Wes Bethel:
Deploying Web-Based Visual Exploration Tools on the Grid. IEEE Computer Graphics and Applications 23(2): 40-50 (2003) - [j9]E. Wes Bethel, John Shalf:
Grid-Distributed Visualizations Using Connectionless Protocols. IEEE Computer Graphics and Applications 23(2): 51-59 (2003) - [j8]Gabrielle Allen, Tom Goodale, Thomas Radke, Michael Russell, Edward Seidel, Kelly Davis, Konstantinos Dolkas, Nikolaos D. Doulamis, Thilo Kielmann, André Merzky, Jarek Nabrzyski, Juliusz Pukacki, John Shalf, Ian J. Taylor:
Enabling Applications on the Grid: A Gridlab Overview. Int. J. High Perform. Comput. Appl. 17(4): 449-466 (2003) - [c10]Gunther H. Weber, Martin Öhler, Oliver Kreylos, John Shalf, E. Wes Bethel, Bernd Hamann, Gerik Scheuermann:
Parallel Cell Projection Rendering of Adaptive Mesh Refinement Data. IEEE Symposium on Parallel and Large-Data Visualization and Graphics 2003: 51-60 - [c9]Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, David Skinner, Stéphane Ethier, Rupak Biswas, M. Jahed Djomehri, Rob F. Van der Wijngaart:
Evaluation of Cache-based Superscalar and Cacheless Vector Architectures for Scientific Computations. SC 2003: 38 - [c8]E. Wes Bethel, Greg Abram, John Shalf, Randy Frank, James P. Ahrens, Steven G. Parker, Nagiza F. Samatova, Mark C. Miller:
Interoperability of Visualization Software and Data Models is NOT an Achievable Goal. IEEE Visualization 2003: 607-610 - 2002
- [j7]Michael Russell, Gabrielle Allen, Greg Daues, Ian T. Foster, Edward Seidel, Jason Novotny, John Shalf, Gregor von Laszewski:
The Astrophysics Simulation Collaboratory: A Science Portal Enabling Community Software Development. Clust. Comput. 5(3): 297-304 (2002) - [j6]Gregor von Laszewski, Michael Russell, Ian T. Foster, John Shalf, Gabrielle Allen, Greg Daues, Jason Novotny, Edward Seidel:
Community software development with the Astrophysics Simulation Collaboratory. Concurr. Comput. Pract. Exp. 14(13-15): 1289-1301 (2002) - [c7]Gabrielle Allen, Dave Angulo, Tom Goodale, Thilo Kielmann, André Merzky, Jarek Nabrzyski, Juliusz Pukacki, Michael Russell, Thomas Radke, Edward Seidel, John Shalf, Ian J. Taylor:
GridLab: Enabling Applications on the Grid. GRID 2002: 39-45 - [c6]Tom Goodale, Gabrielle Allen, Gerd Lanfermann, Joan Massó, Thomas Radke, Edward Seidel, John Shalf:
The Cactus Framework and Toolkit: Design and Applications. VECPAR 2002: 197-227 - 2001
- [j5]Gabrielle Allen, Werner Benger, Thomas Dramlitsch, Tom Goodale, Hans-Christian Hege, Gerd Lanfermann, André Merzky, Thomas Radke, Edward Seidel, John Shalf:
Cactus Tools for Grid Applications. Clust. Comput. 4(3): 179-188 (2001) - [j4]Gabrielle Allen, David Angulo, Ian T. Foster, Gerd Lanfermann, Chuang Liu, Thomas Radke, Edward Seidel, John Shalf:
The Cactus Worm: Experiments with Dynamic Resource Discovery and Allocation in a Grid Environment. Int. J. High Perform. Comput. Appl. 15(4): 345-358 (2001) - [c5]Michael Russell, Gabrielle Allen, Greg Daues, Ian T. Foster, Edward Seidel, Jason Novotny, John Shalf, Gregor von Laszewski:
The Astrophysics Simulation Collaboratory Portal: A Science Portal Enabling Community Software Development. HPDC 2001: 207-215 - [c4]Gunther H. Weber, Oliver Kreylos, Terry J. Ligocki, John M. Shalf, Hans Hagen, Bernd Hamann, Kenneth I. Joy:
Extraction of Crack-free Isosurfaces from Adaptive Mesh Refinement Data. VisSym 2001: 25-34 - [c3]Gunther H. Weber, Oliver Kreylos, Terry J. Ligocki, John Shalf, Hans Hagen, Bernd Hamann, Kenneth I. Joy, Kwan-Liu Ma:
High-quality Volume Rendering of Adaptive Mesh Refinement Data. VMV 2001: 121-128 - [i1]Gabrielle Allen, Dave Angulo, Ian T. Foster, Gerd Lanfermann, Chuang Liu, Thomas Radke, Edward Seidel, John Shalf:
The Cactus Worm: Experiments with Dynamic Resource Discovery and Allocation in a Grid Environment. CoRR cs.DC/0108001 (2001) - 2000
- [c2]Gabrielle Allen, Werner Benger, Tom Goodale, Hans-Christian Hege, Gerd Lanfermann, André Merzky, Thomas Radke, Edward Seidel, John Shalf:
The Cactus Code: A Problem Solving Environment for the Grid. HPDC 2000: 253-260
1990 – 1999
- 1999
- [j3]Gabrielle Allen, Tom Goodale, Gerd Lanfermann, Thomas Radke, Edward Seidel, Werner Benger, Hans-Christian Hege, André Merzky, Joan Massó, John Shalf:
Solving Einstein's Equations on Supercomputers. Computer 32(12): 52-58 (1999) - [j2]Michael L. Norman, John Shalf, Stuart Levy, Greg Daues:
Diving deep: data-management and visualization strategies for adaptive mesh refinement simulations. Comput. Sci. Eng. 1(4): 36-47 (1999) - [c1]Werner Benger, Ian T. Foster, Jason Novotny, Edward Seidel, John Shalf, Warren Smith, Paul Walker:
Numerical Relativity in a Distributed Environment. PP 1999 - 1996
- [j1]Michael L. Norman, Peter H. Beckman, Greg L. Bryan, John Dubinski, Dennis Gannon, Lars Hernquist, Kate Keahey, Jeremiah P. Ostriker, John Shalf, Joel Welling, Shelby X. Yang:
Galaxies Collide On the I-Way: an Example of Heterogeneous Wide-Area Collaborative Supercomputing. Int. J. High Perform. Comput. Appl. 10(2-3): 132-144 (1996)
Coauthor Index
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