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VitisCyc: a metabolic pathway knowledgebase for grapevine (Vitis vinifera)
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This edition contains research updates and a comprehensive list of publications summarizing research conducted by faculty of the Oregon Wine Research Institute at Oregon State University. Dr. Elizabeth Tomasino, OSU Associate Professor,... more
This edition contains research updates and a comprehensive list of publications summarizing research conducted by faculty of the Oregon Wine Research Institute at Oregon State University. Dr. Elizabeth Tomasino, OSU Associate Professor, opens the newsletter with an article on the influence of two compounds on Pinot noir aroma. Drs. Laurent Deluc and Satyanarayana Gouthu, OSU Associate Professor and post-doctoral research associate, along with Mandie Driskill, OSU undergraduate student, provide valuable information on their research identifying Oregon Pinot noir clones confirmed through molecular methods. Dr. Vaughn Walton, OSU Professor, gives an update on the latest research studying how the spotted-wing drosophila contributes to the development of sour rot in wine grapes. Lastly, Beau Olen, OSU faculty research assistant, discusses the return on investment for wine grape insurance.
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Auxin is a key phytohormone that modulates fruit formation in many fleshy fruits through the regulation of cell division and expansion. Auxin content rapidly increases after pollination and the manipulation in its levels may lead to the... more
Auxin is a key phytohormone that modulates fruit formation in many fleshy fruits through the regulation of cell division and expansion. Auxin content rapidly increases after pollination and the manipulation in its levels may lead to the parthenocarpic development. ln Vitis vinifera L., little is known about the early fruit development that encompasses from pollination to fruit set. Pollination/fertilization events trigger fruit formation, and auxin treatment mimics their effect in grape berry set. However, the role of auxin in this process at the molecular level is not well understood. To elucidate the participation of auxin in grapevine fruit formation, morphological, reproductive, and molecular events from anthesis to fruit set were described in sequential days after pollination. Exploratory RNA-seq analysis at four time points from anthesis to fruit set revealed that the highest percentage of genes induced/repressed within the hormone-related gene category were auxin-related gene...
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ABSTRACT Hormones play an important role during the development and ripening of grape berry. Unlike the case of ethylene in climacteric fruits, several different hormones are believed to sequentially accumulate at specific times during... more
ABSTRACT Hormones play an important role during the development and ripening of grape berry. Unlike the case of ethylene in climacteric fruits, several different hormones are believed to sequentially accumulate at specific times during berry developmental stages to promote different physiological processes. To dissect this complex hormonal interaction system in a recalcitrant tissue containing several interfering compounds including sugar and phenolic compounds, an extraction pro- tocol and an LC-MS-based analytical method that includes three hormone families have been adapted. Using this technique, we optimized a method to simultaneously detect and quantify cytokinin, auxin, and abscisic acid-related analytes in grape berries across the developmental stages and between tissues. Resulting quantification of the analytes are consistent with the overall trend of the ABA, auxin, and cytokinin dynamics in grape and reveal new patterns not previously reported in this plant. Evolving evidence of coordinated action of several hormones during the critical phases of berry development (cell division, cell expansion, berry ripening) suggests a need to further integrate other plant growth regulator families to provide a more comprehensive picture.
Individual berries in a grape (Vitis vinifera L.) cluster enter the ripening phase at different times leading to an asynchronous cluster in terms of ripening. The factors causing this variable ripening initiation among berries are not... more
Individual berries in a grape (Vitis vinifera L.) cluster enter the ripening phase at different times leading to an asynchronous cluster in terms of ripening. The factors causing this variable ripening initiation among berries are not known. Because the influence via hormonal communication of the seed on fruit set and growth is well known across fruit species, differences in berry seed content and resultant quantitative or qualitative differences in the hormone signals to the pericarp likely influence the relative timing of ripening initiation among berries of the cluster. At the time of the initiation of cluster ripening (véraison), underripe green berries have higher seed content compared to the riper berries and there is a negative correlation between the seed weight-to-berry weight ratio (SB) and the sugar level in berries of a cluster. Auxin levels in seeds relative to the pericarp tissues are two to 12 times higher at pre-ripening stages. The pericarp of berries with high-SB h...
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Transcriptional studies in relation to fruit ripening generally aim to identify the transcriptional states associated with physiological ripening stages and the transcriptional changes between stages within the ripening programme. In... more
Transcriptional studies in relation to fruit ripening generally aim to identify the transcriptional states associated with physiological ripening stages and the transcriptional changes between stages within the ripening programme. In non-climacteric fruits such as grape, all ripening-related genes involved in this programme have not been identified, mainly due to the lack of mutants for comparative transcriptomic studies. A feature in grape cluster ripening (Vitis vinifera cv. Pinot noir), where all berries do not initiate the ripening at the same time, was exploited to study their shifted ripening programmes in parallel. Berries that showed marked ripening state differences in a véraison-stage cluster (ripening onset) ultimately reached similar ripeness states toward maturity, indicating the flexibility of the ripening programme. The expression variance between these véraison-stage berry classes, where 11% of the genes were found to be differentially expressed, was reduced signific...