Part 1
Part 1
Part 1
School of Chemistry
University of Birmingham
Prof Preece’s Powerpoint Lecture Presentations
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1 Pericyclic Reactions These lectures will begin with a definition of Pericyclic reactions, and will be
exemplified by considering examples of cycloaddation, sigmatropic, and electrocyclic reactions. It will be
highlighted how it is possible to use FMO theory (and other theories) to predict the constitution and
stereochemical outcome of the products. Attention will be drawn to the cyclic transition state and the number of
electrons involved (Huckel or Mobius), highlighting that when 4n+2 electrons are involved the reaction proceeds
readily under thermal conditions, and the reversibility of such reactions. The concept of Linear Combination of
Atomic Orbitals to form a bond(s) (and antibond(s)) will be revised, and extended to the linear combination of
frontier molecular orbitals. The p-molecular orbitals of ethene, butadiene and 1,3,5-hexatriene will be considered
and the identities of the HOMO and LUMO will be established, as well as the FMOs of a C–H bond.
2i Electrocyclic Reactions This lecture will extend the predicative nature of FMO theory regarding the
stereochemical outcomes to electrocyclic reactions for 4 and 6 p-electron transition states (by defining the
disrotatory or conrotatory movement of the termini of the HOMO in the Transition State).
2ii Cycloaddition Reactions These lectures will introduce cycloaddition reactions and the concepts of (i) phase
relationships of the FMOs, (ii) geometry of approach of the FMOs (suprafacial and antarafacial will be
defined), and (iii) minimum energy differences between the HOMO and LUMO. These concepts will be
exemplified by several Diels-Alder and related reactions. Attention will be drawn to the nature (chemical and
stereochemistry) of substituents and their stereochemistry in the product.
3 Photochemically Induced Pericyclic reactions These lecture will extend the predicative nature of FMO
theory regarding the outcomes of electrocyclic reactions and cycloaddition reactions by considering how they can
be induced photochemically, to give alternative stereochemical outcomes and allow reactions that did not go
thermally.
Part 1. Frontier Molecular Orbitals
Recommended Reading
I Fleming
Frontier Orbitals and Organic Chemical Reactions, John Wiley and Sons, 1996.
Part 1: Ch 1 and Ch 2
Part 2 and 3: Ch 4
Second Year Organic Chemistry Course
CHM3A2
Frontier Molecular Orbitals and
Pericyclic Reactions
Part 1(i):
100% 0%
Ionic And Radical Reactions
To date you have seen two broad categories of reaction:
B
H R23 BH R1 R2
R
R1R4 Cl R4 R3 Cl
CH3 Cl Cl H3C Cl Cl
Pericyclic Reactions
In which all bond breaking and bond making steps take place in
commensurate manner
Stereospecific Reaction
Clockwise
100% 0%
CO2Me CO2Me
CO2Me
100% 0%
Regiospecific Reaction
MeO
MeO CHO
MeO CHO
CHO
0% 100%
Revision: 1,3–Syndiaxial Interactions
Br
1,3-syndiaxial interactions
H
Br
H Br
H H
H
H H
Br H
H 1
H
3
2
axial H
H
Br H
H
H
Br Br H
H H
H
H
equitorial H
H
Thermodynamic and Kinetic Control
Kinetic Thermodynamic
Product Product
Formed in Not Formed in
Cycloaddition MeO C CO2Me Cycloaddition
2 MeO 2C CO2Me
Reaction Reaction
H H
CO2Me H
CO2Me CO2Me
CO2Me
H H
MeO2C H
MeO2C MeO 2C
H MeO 2C
H H
Pericyclic Reactions: Sigmatropic Reactions
Stereospecific Regiospecific
Reaction Reaction
H
D D
Me
Me
Me
H
D
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Pericyclic Reactions: Why are they so specific?
(i) Stereoselectivity
(iii) Diastereoselectivity
To help begin to answer this question we shall briefly need to revise the
SN2 reaction mechanism where YOU WILL remember that this reaction
type was highly stereoselective leading to inversion of chiral centres.
Revision: SN2 Reaction Mechanism
Bimolecular
R1 Process Nucleophile attacks from behind
Nu Cl the C-Cl s-bond.
3
R Rate = k[R-Hal][Nu]
R2
This is where the s*-antibonding
sp3
Rate
Determinig orbital of the C-Cl bond is
Step situated.
1 R1 1 R1
– –
2 2
Nu Cl Nu Cl
R3
R3 R2
R2
Inversion
Bond Bond of Configuration
Forming Breaking
Transition State –
Energy Maxima
sp2
The concerted flow of both pairs of electrons in the SN2 reaction
mechanism leads to the transition state which allows the
stereochemical information to be retained,
The nature of the transition state will determine whether the reaction is a
difficult one, requiring a high activation enthalpy (G‡), or an easy one.
Transition states are always energy maxima, I.e. at the top of the energy hill,
and therefore, can never be isolated: there are no barriers to prevent them
from immediately “rolling” downhill to form the reaction products or
intermediates (or even reform the starting materials).
Transition
State
Energy
Maxima
E
n
e G‡
r
g Starting
y A+B
Material
Go
Product
C+D
Reaction Coordinate
Pericyclic Reactions: Transition States
CO2Me
CO2Me
CO2Me
CO2Me Cyclic
Transition
CO2Me
CO2Me State
CO2Me
CO2Me
Pericyclic reactions involve ene and polyene units.
CO2Me
Thus, the transition states involve the overlap of p-
molecular orbitals in the case of electrocyclic and CO2Me
cycloaddition reactions, and a p-molecular orbital
and s-molecular orbital in the case of sigmatropic
reactions.
CO2Me
CO2Me
Frontier Molecular Orbitals
We will first revise some simple molecular orbitals of a C-H s-bond and
a C=C p-bond and then extend this analysis to highly conjugated linear
polyenes and related structures/
Second Year Organic Chemistry Course
CHM2C3B
Frontier Molecular Orbitals and
Pericyclic Reactions
Part 1(ii):
Thermal
Reactions 3 2 nodes
LUMO
HOMO 2 1 node
1 0 nodes
CHM2C3B – Learning Objectives Part 1 –
– Introduction to FMOs –
methods.
(i) Given a set of n p-orbitals you should be able to construct a molecular orbital energy level diagram which
nodes
(iii) For a set of n molecular orbitals you should be able to identify the frontier molecular orbitals.
(iv) The HOMO (thermal reaction) interactions are important when evaluating the probability of an
unimolecular reaction occurring and the stereochemical outcome – see electrocyclic reactions.
The HOMO/LUMO (thermal reaction) interactions of the reacting species are important when
evaluating the probability of (i) a bimolecular reaction occurring and the stereochemical
outcome– see cycloaddition reactions, and (ii) a unimolecular reaction occurring and the
stereochemical outcome – see sigmatropic reactions.
The geometry, phase relationship and energy of interacting HOMOs and LUMOS is important for
evaluating the probability of a reaction occurring and the stereochemical outcome.
s-Bond
Two s Atomic Orbitals
Molecular Orbitals
Nodal Plane
ANTI-BONDING
MOLECULAR
ORBITAL
E
N
s*
E
s ATOMIC ORBITAL
R
G
+
Y
BONDING
MOLECULAR
ORBITAL
s
s-Bond
One s Atomic Orbital and One sp3 Atomic Orbital
Molecular Orbitals
ANTI-BONDING
MOLECULAR
ORBITAL
E
N s*
E
R
sp3 ATOMIC ORBITAL
G
Y
+
BONDING
MOLECULAR
ORBITAL
s
p-Bond:
Two p Atomic Orbitals Molecular Orbitals
Nodal Plane
ANTI-BONDING
MOLECULAR
ORBITAL
E p*
N
E p-atomic orbitals
R +
G
Y
BONDING
MOLECULAR
ORBITAL
p
The linear combination of
n atomic orbitals
n molecular orbitals
A SIMPLE Mathematical Description of a MO
The combination of two (or more) p-atomic orbitals (or any orbitals) to
afford 2 p-molecular orbitals can be described by the following simple
mathematical relationship
p* = ccf1 + cdf2
p = caf1 + cbf2
p* Cd = -1/√2 Negative
Cb = 1/√2
p
So what about the combination of 3 or 4
or 5 or 6 p-atomic orbitals.
Cl Cl H
Polar
Solvent
B
Cl Cl BH
Allyl Cation Allyl Radical Allyl Anion
Thus, allyl systems result from the combination of 3 conjugated p-orbitals.
Therefore, this will result in 3 p-molecular orbitals.
When there are three or more p-atomic orbitals combining the size of each
contributing p-atomic orbital will not be equal (but they will be
symmetrical about the centre).
We can consider the molecular orbital (the electron density) being described
by a SINE WAVE starting and finishing one bond length beyond the
molecule…
3 = 2 Nodes
Nodal + + + 3
position
4/3 = 1.33 1.33
Nodes
_ _ 2 = 1 Nodes Nodal
+ + position + + + 2
4/2 = 2 2
1 = 0 Nodes Nodal
position + + + 1
1 2 3 4
4/1 = 4
4
For our analysis of molecular orbitals we do not have to
concern ourselves with the coefficients.
We can draw the p-AOs that make up the p-MOs all the
same size.
3
Anti-bonding
Anti-bonding Level 2
Non-bonding
Non-bonding Level 2
Bonding Level 1
Bonding
1
We can consider the molecular orbital (the electron density) being described
by a sine wave starting and finishing one bond length beyond the molecule…
LUMOs and HOMOs
3 LUMO LUMO
2 nodes
1 0 nodes HOMO
Question 1: 4 p-Molecular Orbital System – Butadiene
Construct the p-molecular orbitals of butadiene.
Identify the number of nodes, nodal positions, HOMO and LUMO.
n Number of Nodal
Nodes Position
Answer 1: 4 p-Molecular Orbital System – Butadiene
Construct the p-molecular orbitals of butadiene.
Identify the number of nodes, nodal positions, HOMO and LUMO.
n Number of Nodal
Nodes Position
4 3 + + + +
5/4 = 1.25
3 2 + + + + LUMO
5/3 = 1.66
2 1 + + + + HOMO
5/2 = 2.5
1 0 + + + +
5/1 = 5
1 2 3 4 5
A Reminder: Sinusodal Wave Function
SIMPLE MORE COMPLEX
4 3 nodes 5/4
1.25
3 2 nodes 5/3
1.66
2 1 node 5/2
2.5
1 2 3 4 5
1 0 nodes 5/1
5
Coefficients, cn
3
1.66
We Keep FMO Analysis Simple!!
For the purpose of this course and the third year course (Applied Frontier
Molecular Orbitals and Stereoelectronic Effects) you are expected
That is to say you can draw the p-orbitals that make up each
molecular orbital as the same size, whilst remembering that
in reality they are not and for high level FMO analysis this
needs to be taken into account.
Question 2: 5 p-Molecular Orbital System – Pentadienyl
Construct the p-molecular orbitals of the cyclopentenyl system.
Identify the number of nodes and nodal positions.
4 3 6/4 = 1.5 + + + + +
3 2 6/3 = 2 + + + + +
2 1 6/2 = 3 + + + + +
1 0 6/1 = 6 + + + + +
1 2 3 4 5 6
Question 3: Pentadienyl Cation, Radical & Anion
Introduce the electrons and identify the HOMOs and LUMOs
Pentenyl Pentenyl Pentenyl
cation radical anion
5 4 nodes
4 3 nodes
3 2 nodes
2 1 node
1 0 nodes
Answer 3: Pentadienyl Cation, Radical & Anion
Introduce the electrons and identify the HOMOs and LUMOs
5 4 nodes
2 1 node HOMO
1 0 nodes
Question 4: Pentadienyl Cation & Anion
Generate the cation and anion and draw the resonance structures of the above species
Cl H
Answer 4: Pentadienyl Cation, Radical & Anion
Generate the cation and anion and draw the resonance structures of the above species
Cl H
B:
6 p-Molecular Orbital System – 1, 3, 5-Hexatriene
6 5 nodes
5 4 nodes
4 3 nodes LUMO
3 2 nodes HOMO
2 1 node
1 0 nodes
7 p-Molecular Orbital System cation (6e) radical (7e) anion (8e)
Nodal Plane
Position
7 6 nodes 8/7 = 1.14
5 LUMO LUMO
4 nodes 8/5 = 1.6
3 HOMO
2 nodes 8/3 = 2.67
2 1 node 8/2 = 4
1 0 nodes 8/1 = 8
Question 5: 6p MO System
Ele ctro ns m o r C2
Node s m C2
By shading the p atomic orbitals,
generate the molecular orbitals for
6
hexa-1,3,5-triene .
orbital.
1
Finally, identify the HOMO and
LUMO.
Answer 5: 6p MO System
m or C2
By shading the p atomic orbitals, Nodes m C2
1
Finally, identify the HOMO and 0 S A
LUMO.
Question 6: MO System
formally been shifted from the oxygen atom onto H3O H2O
three of the five carbon atoms
.
A B
H
Considering only these three resonance O
structures, how many
In an analogous fashion to how question 1 was set out, draw out the molecular orbitals resulting from the p-orbital
combination on this carbon framework, making sure you identify all of the items listed in question 1.
Answer 6: 5p MO System
H
Protonation of A affords B. Draw the three resonance
O O
structures of B in which the positive charge has
H3O H2O
formally been shifted from the oxygen atom onto
three of the five carbon atoms
.
A B
H
O
Considering only these three resonance
structures, how many
In an anologous fashion to how question 5 was set out, draw out the molecular orbitals resulting from the p-orbital
combination on this carbon framework, making sure you identify all of the items listed in question 5.
O
Pentenyl
cation (4e)
Mirror Plane C2 axis
5 4 nodes S A
4 3 nodes A S
3 2 nodes LUMO S A
2 1 node A S
HOMO
1 0 nodes S A
Second Year Organic Chemistry Course
CHM2C3B
Frontier Molecular Orbitals and
Pericyclic Reactions
Part 1(iii):
The extent of the interaction depends upon the geometry of approach of the
components since the relative geometry affects the amount of possible overlap.
It also depends on the phase relationship of the orbitals – and also upon their
energy of separation, a small energy favouring a greater interaction.
Generally, the two reactants will interact, via the highest occupied molecular
orbital (HOMO) of one component and the lowest unoccupied molecular orbital
(LUMO) of the other component, the so-called frontier molecular orbitals (FMOs).
Consider the next five frames to appreciate this paragraph of text. Consider an
SN2 Reaction…
Revision: Transition State Geometries of Nucleophiles
Attacking sp3 Tetrahedral Centres
TET Nu X
Nu X Nu X
sp3
= 180°
Inversion of Configuration
Supports this Attack Angle
X
Nu
sC–Nu
NucleophileHOMO
s* C–X
LUMO
The orbital containing the lone pair of electrons on the Nu
is the…
This analysis of FMOs (HOMOs and LUMOs) for such a simple reactions may
seem pointless for a simple SN2 reaction.
It is not!
Understand it.
In this course we will examine the use of FMOs to explain and predict the
outcomes of a class of reactions referred to as pericyclic.
The use of FMOs is an extremely powerful tool to the synthetic organic chemist
when analysing and predicting the outcome of pericyclic reactions.
CHM3A2 – Summary Sheet Part 1 –
– Introduction to FMOs –
In this course we will concentrate solely on the use of MO theory in predicting the outcome of pericyclic reactions. But it
should not be forgotten that MO theory is applicable to other types of chemical reraction
To understand the importance of MO theory, we shall consider three types of pericyclic reactions and show how frontier
molecular orbitals of the reactants can be used in a predicative nature to work out whether the reaction will proceed and
what the stereo/regiochemical outcome will be.
electrcyclic reactions
cycloaddition reactions
sigmatropic reactions
We will see how it is possible to predict the stereoselectivity, diastereoselectivity, and regioselectivity of pericyclic
reactions by the analysis of the FMOs of the transition states
The precise construction of the p-molecular orbitals by the linear combination of p-atomic orbitals is extremely important if
FMO theory is to yield the correct stereochemical product outcomes,
Key points to note when constructing p-molecular orbitals from the combination of p-AOs are