- Fujian Agriculture and Forestry University, China, College of Plant Protection, Graduate Studentadd
- Assistant Professoredit
To elucidate taxonomic eminence of identical pest species is essential for many ecological and conservation studies. Without proficient skills, accurate molecular identification and characterization are laborious and time-consuming. The... more
To elucidate taxonomic eminence of identical pest species is essential for many ecological and conservation studies. Without proficient skills, accurate molecular identification and characterization are laborious and time-consuming. The coconut leaf beetle, Brontispa longissima (Gestro) (Coleoptera: Chrysomelidae), is biologically and morphologically identical to hispid leaf beetle, Octodonta nipae (Maulik) (Coleoptera: Chrysomelidae), and is known as the most harming nuisances of palm cultivation worldwide. The present examination was to establish Wolbachia genotyping analysis along with host cytochrome oxidase subunit I (COI) gene for accurate identification between these individuals of the same family (Chrysomelidae). Here, we have cloned and sequenced a gene coding Wolbachia surface protein (wsp) and COI gene regions amplified from both species by polymerase chain reaction. The nucleotide sequences were directly determined (≈600 bp for wsp and ≈804 bp for COI) and aligned using the multiple alignment algorithms in the ESPript3 package and the MEGA5 program. Comparative sequence analysis indicated that the representative of wsp and COI sequences from these two beetles were highly variable. To ensure this bacterial variation, multilocus sequence typing (MLST) of bacterial genes was conducted, and the results vindicated the same trend of variations. Furthermore, the phylogenetic analysis also indicates that B. longissima and O. nipae being the two different species harbors two distinct Wolbachia Hertig and Burt (Rickettsiales: Anaplamataceae) supergroups B and A, respectively. The present outcomes quickly discriminate between these two species. Considering its simplicity and cost-effectiveness, it can be used as a diagnostic tool for discriminating such invasive species particularly B. longissima and O. nipae which has overlapping morphologic characters.
Wolbachia pipientis is a diverse, ubiquitous and most prevalent intracellular bacterial group of alpha-Proteobacteria that is concerned with many biological processes in arthropods. The coconut hispine beetle (CHB), Brontispa longissima... more
Wolbachia pipientis is a diverse, ubiquitous and most prevalent intracellular bacterial group of alpha-Proteobacteria that is concerned with many biological processes in arthropods. The coconut hispine beetle (CHB), Brontispa longissima (Gestro) is an economically important pest of palm cultivation worldwide. In the present study, we comprehensively surveyed the Wolbachia-infection prevalence and mitochondrial DNA (mtDNA) polymorphism in CHB from five different geographical locations, including China's Mainland and Taiwan, Vietnam, Thailand, Malaysia and Indonesia. A total of 540 sequences were screened in this study through three different genes, i.e., cytochrome oxidase subunit I (COI), Wolbachia outer surface protein (wsp) and multilocus sequencing type (MLST) genes. The COI genetic divergence ranges from 0.08% to 0.67%, and likewise, a significant genetic diversity (π = 0.00082; P = 0.049) was noted within and between all analyzed samples. In the meantime, ten different haplotypes (H) were characterized (haplotype diversity = 0.4379) from 21 different locations, and among them, H6 (46 individuals) have shown a maximum number of population clusters than others. Subsequently, Wolbachia-prevalence results indicated that all tested specimens of CHB were found positive (100%), which suggested that CHB was naturally infected with Wolbachia. Wolbachia sequence results (wsp gene) revealed a high level of nucleotide diversity (π = 0.00047) under Tajima's D test (P = 0.049). Meanwhile, the same trend of nucleotide diversity (π = 0.00041) was observed in Wolbachia concatenated MLST locus. Furthermore, phylogenetic analysis (wsp and concatenated MLST genes) revealed that all collected samples of CHB attributed to same Wolbachia B-supergroup. Our results strongly suggest that Wolbachia bacteria and mtDNA were highly concordant with each other and Wolbachia can affect the genetic structure and diversity within the CHB populations.
A B S T R A C T Noncoding RNAs play essential functions during epigenetic regulation of gene expression and development in numerous organisms. Three type of small noncoding RNAs found in eukaryotes, which are small interfering RNAs... more
A B S T R A C T Noncoding RNAs play essential functions during epigenetic regulation of gene expression and development in numerous organisms. Three type of small noncoding RNAs found in eukaryotes, which are small interfering RNAs (siRNAs), microRNAs (miRNAs) and piwi-interacting RNAs (piRNAs). Small RNAs (sRNAs) originated from infecting viruses are known as virus-derived small interfering RNAs (vsiRNAs), are responsible for RNA silencing in plants. However, Virus-induced gene silencing (VIGS) is mainly dependent on RNA silencing (RNAi). Interestingly, RNA silencing happens in plants and insects during viral infections. VsiRNAs originate from dsRNA molecules which further require hosts Dicer-like (DCL) proteins, RNA dependent RNA polymerase (RdRP) proteins, and Argonaute (AGO) proteins. RdRP uses ssRNA for complete RNA amplification process as well as DCL dependent secondary vsiRNA formation. Viral Suppressors of RNA silencing (VSRs) interfere with the movement of signals during silencing mechanism. Moreover, intercellular movement of viruses is facilitated by virus-encoded movement proteins. Proteomic and Transcriptomic mechanisms regulated by specific factors like microRNAs, which has become an essential factor of gene regulation. RNAi is also involved in gene suppression by regulating the transcriptional and post-transcriptional gene expression in many eukaryotes. Rice grassy stunt virus (RGSV) is a member of genus Tenuivirus. Although, there is no much work done on RGSV, but this virus has become very potent and destructive, and effects rice crop in many Asian countries, particularly in China. In this review, we have highlighted the rice viruses' biology and silencing suppressors. This work will be helpful for plant virologists in understanding the role of vsiRNAs mechanism in rice viruses especially RGSV.
Among the intracellular bacterial symbionts, the genus Wolbachia (Rickettsiaceae: Rickettsiales) is one of the most abundant taxa associated with reproductive systems of various insects. It is cytoplasmic inherited endosymbiont that... more
Among the intracellular bacterial symbionts, the genus Wolbachia (Rickettsiaceae: Rickettsiales) is one of the most abundant taxa associated with reproductive systems of various insects. It is cytoplasmic inherited endosymbiont that induce various reproductive alterations. Characterization analysis has revealed that a number of arthropods harbour Wolbachia sp. estimates from 20-80%, with emphasize on Coleopterous insects (41 species have been reported so far). Therefore, in the context of broad existence and unique phenotypic actions to alter reproductive systems of various insect, we aimed to determine the intriguing possibility of this endosymbiont from one of the deadliest palm pest, i.e. red palm weevil (RPW), Rynchophorus ferrugineus (Curculionidae) from different geographical locations using polymerase chain reactions (PCR) with four sets of Wolbachia-specific primers (SPs) along with one pair of universal bacterial primer (BP). Parallel analysis was also carried out with Wolbachia strain isolated from whitebacked plant hopper, Sogatella furcifera (Homoptera: Delphacidae), as a positive control. Our analysis confirmed the absence of Wolbachia sp. across the various life stages of RPW reared in laboratory or captured from the field. Moreover, the phylogenetic analysis of all closely related Wolbachia-mediated weevils were compiled and retrieved from NCBI database indicates the extent of transfection of this bacterium into RPW for the future work on biological control of RPW. This study may facilitate to understand further evolutionary consequences of Wolbachia infection in weevils.
The hispid leaf beetle, Octodonta nipae (Maulik), (Coleoptera: Chrysomelidae), is a devastating pest of palm cultivation worldwide. Endosymbiotic bacteria in the genus Wolbachia are arguably one of the most abundant bacterial group... more
The hispid leaf beetle, Octodonta nipae (Maulik), (Coleoptera: Chrysomelidae), is a devastating pest of palm cultivation worldwide. Endosymbiotic bacteria in the genus Wolbachia are arguably one of the most abundant bacterial group associated with arthropods. Owing to its critical effects on host reproduction, Wolbachia has garnered much attention as a prospective future tool for insect pest management. However, their association, infection dynamics, and functionality remain unknown in this insect pest. Here, we diagnosis for the first time, the infection prevalence, and occurrence of Wolbachia in O. nipae. Experimental evidence by the exploration of wsp gene vindicate that O. nipae is naturally infected with bacterial symbiont of genus Wolbachia, showing a complete maternal inheritance with shared a common Wolbachia strain (wNip). Moreover, MLST (gatB, fbpA, coxA, ftsZ, and hcpA) analysis enabled the detections of new sequence type (ST-484), suggesting a particular genotypic association of O. nipae and Wolbachia. Subsequently, quantitative real-time PCR (qPCR) assay demonstrated variable infection density across different life stages (eggs, larvae, pupae and adult male and female), body parts (head, thorax, abdomen), and tissues (ovaries, testes, and guts). Infection density was higher in egg and female adult stage, as well as abdomen and reproductive tissues as compared to other samples. Interestingly, Wolbachia harbored dominantly in a female than the male adult, while, no significant differences were observed between male and female body parts and tissues. Phylogeny of Wolbachia infection associated with O. nipae rectified from all tested life stages were unique and fall within the same monophyletic supergroup-A of Wolbachia clades. The infection density of symbiont is among the valuable tool to understand their biological influence on hosts, and this latest discovery would facilitate the future investigations to understand the host-symbiont complications and its prospective role as a microbiological agent to reduce pest populations.
The endo-symbiotic relationship between microorganism and eukaryotes are very common and has been broadly investigated from all insect species. The genus Wolbachia are obligatory intracellular bacteria that induce evolutionary alterations... more
The endo-symbiotic relationship between microorganism and eukaryotes are very common and has been broadly investigated from all insect species. The genus Wolbachia are obligatory intracellular bacteria that induce evolutionary alterations and have been frequently reported in egg cytoplasm's of various invertebrates including insects, spiders, mites, scorpions, crustaceans and nematodes, which exert a profound impact on host biology and behavior through a number of phenotypic alternations. Due to its ubiquitous phenotypic behavior, Wolbachia becomes a novel and promising natural micro-biocontrol agent to induce cytoplasmic incompatibility, killing of male embryos, parthenogenesis, and feminization. Autonomous transgenic capability, survival on several host species and the ability to modify the host reproductive systems makes it the most prominent and focusing scientific genomic research from last few decades. The aim of this review is to summarize the significance and recent discoveries of Wolbachia related to various arthropods which lead positive directions to be exploited in future for integrated pest management (IPM) strategies. Further, this review also discussed the biology, phylogeny, distributions, classifications and types of Wolbachia infections on insect orders and coleopterans in particular.
Research Interests:
The Red Palm Weevil is a serious problem of the date palm in Pakistan. The sole and combine application effects of Beauveria bassiana (Balsamo) Vuillemin (Hyphomycetes) and sub-lethal dosages of Imidacloprid against the second and fourth... more
The Red Palm Weevil is a serious problem of the date palm in Pakistan. The sole and combine application effects of Beauveria bassiana (Balsamo) Vuillemin (Hyphomycetes) and sub-lethal dosages of Imidacloprid against the second and fourth instar larvae of Rhynchophorus ferrugineus Olivier was investigated in laboratory. Additionally, the in vitro hyphal growth of B. bassiana amended with three different concentrations (50, 250, 500 μl L-1) of Confidor® 200 SL was also assessed. The results showed significantly higher mortality for the second and fourth instar larvae of RPW when B. bassiana and Imidacloprid applied together compared to their sole application. The highest mortality level (100%) for
the second instar was recorded after 15 days of treatment with B. bassiana (1×106 conidia/ml) and Imidacloprid (1 μl L-1) in combination, while for the fourth instar larvae it was achieved after 20 days of application. However, the presence of Imidacloprid did not significantly affect the hyphal growth of B.
bassiana on Sabouraud Dextrose Agar (SDA), and greater colony sizes compared to untreated control were recorded in all cases. The maximum number of sporulation (173, 159.83 conidia ml-1) and
percentage (89.15, 79.4%) of mycosed R. ferrugineus cadavers was observed at lower dose rate (1×106 conidia/ml) of B. bassiana, exhibited the potential to be exploited for the control of RPW.
the second instar was recorded after 15 days of treatment with B. bassiana (1×106 conidia/ml) and Imidacloprid (1 μl L-1) in combination, while for the fourth instar larvae it was achieved after 20 days of application. However, the presence of Imidacloprid did not significantly affect the hyphal growth of B.
bassiana on Sabouraud Dextrose Agar (SDA), and greater colony sizes compared to untreated control were recorded in all cases. The maximum number of sporulation (173, 159.83 conidia ml-1) and
percentage (89.15, 79.4%) of mycosed R. ferrugineus cadavers was observed at lower dose rate (1×106 conidia/ml) of B. bassiana, exhibited the potential to be exploited for the control of RPW.
Research Interests:
Moringa oleifera commonly known as Moringa is a multipurpose plant. Field trials were conducted to assess the potency of Moringa leaf (MLE) and root extracts (MRE) as plant growth regulator (PGR) and a Bio-pesticide on wheat crop. At... more
Moringa oleifera commonly known as Moringa is a multipurpose plant. Field trials were conducted to assess the potency of Moringa leaf (MLE) and root extracts (MRE) as plant growth regulator (PGR) and a Bio-pesticide on wheat crop. At distinct crop growth stages (tillering, booting, and heading) with different concentrations (5, 10, 12.5, and 25% v/v or w/v or w/w) of MLE and MRE were applied. Results showed statistically significant increase in crop growth traits and reduction in aphid infestation (booting, milk, and heading stage). As plant growth regulator maximum leaf area duration (LAD), leaf area index (LAI), and total dry matter accumulation (TDM) were recorded at all growth stages for MLE 25%. Highest crop growth rate (CGR) (24.91 gm-2day-1) at tillering was achieved for MLE 5%, 13.04 gm-2day-1 for MRE 10% at booting stage and 8.76 gm-2day-1 for MLE 10% at heading stage. Maximum thousand
grains weight (57.33g), highest number of spikes per plant (9.67plant-1) and maximum grain yield (4446Kg hac-1) were determined for MLE 25%. The heading stage of the
crop was heavily infested with aphids and MLE 5% significantly reduced pest infestation compared to other concentrations of MLE and MRE and control group. Overall, MLE and MRE proved very effective as plant growth regulator and a Biopesticide
against wheat aphid on wheat crop.
grains weight (57.33g), highest number of spikes per plant (9.67plant-1) and maximum grain yield (4446Kg hac-1) were determined for MLE 25%. The heading stage of the
crop was heavily infested with aphids and MLE 5% significantly reduced pest infestation compared to other concentrations of MLE and MRE and control group. Overall, MLE and MRE proved very effective as plant growth regulator and a Biopesticide
against wheat aphid on wheat crop.