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Adaptation of microorganism in
environment
• Microbial symbiotic associations, which are
pervasive, can be beneficial (mutualistic),
neutral (commensal), or harmful (pathogenic)
to the host animal.
• Within symbioses, microbes can exploit the
host for space and nutrients or as a vector for
dissemination to other environments.
• Both within and between hosts, microbes
experience changing environmental conditions
to which they must adapt for optimal fitness
and for maintenance of symbiotic associations.
• SURVIVAL
• Microorganisms are adapted for optimum functioning in
their normal physiological environments.
• Any extreme change in environmental conditions from the
optimum inflicts a stress on an organism.
• The extent of the change will determine whether the
organism is killed, ceases growth, or has an increased lag
time and reduced growth rate.
• Most bacteria are able to tolerate small changes in an
environmental parameter and can adapt over the time scale
of minutes, hours, or days (Hill and others 1995).
• Microorganisms do this by both yielding to the stress
conditions and making suitable provisions for survival or
attempting to resist the stress (Herbert 1989). For most
organisms, this tolerance can be pushed to maximum limits
if the cell is provided with sufficient opportunity to sense
and adapt to the deteriorating environment.
Microorganisms will produce proteins and enzymes to
adapt to various environments
• Entire groups of microorganisms such as psychrophiles,
acidophiles, and halophiles have adapted their lifestyles to
prefer these extreme environments. Psychrophiles are
microorganisms that can grow at 0 °C and have an optimum
growth temperature of 15 °C or less and a temperature
maximum of around 20 °C.
• Acidophiles are microorganisms that have their growth
optimum between about pH 1.0 and 5.5, and halophiles are
microorganisms that require high levels of sodium chloride
for growth such as 2.8 molal and up to 6.2 molal for
extreme halophiles.
• Changes in environmental conditions away from the
optimal value can cause the induction of many elaborate
stress responses.
• These strategies are generally directed at survival rather
than growth.

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Single cell proteinSingle cell protein
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Single cell protein (SCP) refers to protein extracted from pure cultures of microorganisms like yeast, algae, fungi and bacteria. It can be used as a protein supplement for humans and animals. SCP is produced by growing microorganisms on substrates through fermentation. The microbes are then harvested, processed and treated to isolate and purify the protein. SCP has potential advantages as a sustainable protein source but also risks if toxic microbes or byproducts are consumed.

Microbial degradation of xenobiotics
Microbial degradation of xenobioticsMicrobial degradation of xenobiotics
Microbial degradation of xenobiotics

This document summarizes microbial degradation of various xenobiotics and pollutants. It discusses how microbes like bacteria, fungi and actinomycetes are able to degrade compounds like hydrocarbons, PAHs, pesticides, dyes and other xenobiotics. The microbes produce enzymes that allow them to use these compounds as carbon and energy sources and breakdown the compounds into simpler molecules like carbon dioxide and water.

xenobioticsmicrobial degradationpolycyclic comppunds
Chemolithotrophy sulfur oxidation metabolism
Chemolithotrophy                    sulfur oxidation metabolismChemolithotrophy                    sulfur oxidation metabolism
Chemolithotrophy sulfur oxidation metabolism

This document discusses sulfur-oxidizing bacteria and their chemolithotrophic metabolism. It provides details on various sulfur-oxidizing bacteria such as Beggiatoa, Thiobacillus, Sulfolobus, and Thiomicrospira. It explains that these bacteria are able to use reduced inorganic sulfur compounds like hydrogen sulfide as electron donors to generate energy through electron transport phosphorylation. The oxidation of these compounds produces sulfuric acid. It also notes that while most sulfur oxidation is aerobic, some bacteria can perform this process anaerobically using nitrate as the terminal electron acceptor.

Extreme Environments
• Microorganisms are found in a wide range of environments that differ in
pH, temperature, atmospheric pressure, salinity, water availability, and
ionizing radiation.
• In some environments, these conditions can be at either end of a continuum
(e.g., very alkaline or acidic; extremely hot or cold). Such environments are
called extreme environments.
• The microorganisms that survive in such environments are described as
extremophiles.
• Although extreme environments are usually considered to have decreased
microbial diversity, as judged by the microorganisms that can be cultured,
with the increased use of molecular detection techniques, it appears that
many contain a surprising diversity of microorganisms.
• Work to establish relationships between the microorganisms that can be
observed and detected by molecular techniques and culturable
microorganisms is ongoing.
• Many microbial genera have specific requirements for survival in extreme
environments. For example, a high sodium ion concentration is required to
maintain membrane integrity in many halophilic procaryotes, including
members of the genus Halobacterium. Halobacteria require a sodium ion
concentration of at least 1.5 M, and about 3 to 4 M for optimum growth.
• Microbial life at high salt concentrations is phylogenetically
very diverse. Hypersaline environments with salt
concentrations up to NaCl saturation are inhabited by
halophilic and highly halotolerant representatives of all
three domains of life: Archaea, Bacteria and Eukarya.
• The mechanisms used by these salt-requiring or highly salt-
tolerant microorganisms to withstand the high salt
concentrations, and in many cases also to adapt their
physiology to changes in the salt concentrations in their
environments, are diverse as well.
• Biological membranes are permeable to water. Therefore,
water moves into and out of cells driven by differences in
water activity between the cytoplasm and the outside
medium.
Adaptation of microorganism in environment- microbial ecology
• To maintain a high osmotic pressure inside the
cells, different strategies can be used, which are
as follows:
• The ‘salt-in’ strategy where osmotic balance is
achieved by accumulating high concentrations of
inorganic salts in the medium. As Na+ ions are
excluded as much as possible from cells in all
three domains of life, the ‘salt-in’ strategy is
based on KCl rather than on NaCl as the main
intracellular salt.

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Freshwater bodies can be divided into zones based on environmental factors like depth and sunlight penetration. The major zones are: 1) The littoral zone near the shoreline, which receives nutrients from runoff and supports plant and algae growth. 2) The limnetic zone in open water, divided into the euphotic zone near the surface with sunlight and oxygen, and the deeper profundal zone without sunlight below the thermocline. 3) The benthic zone along the bottom consists of sediments and decomposes organic matter from the other zones. Marine environments also exhibit zonation. The water column is divided horizontally into neritic and oceanic zones, and vertically into phot

Microbial diversity & redundancy
Microbial diversity & redundancy Microbial diversity & redundancy
Microbial diversity & redundancy

Microbiology is the study of microscopic organisms. There are several branches of microbiology including bacteriology, mycology, and virology. Microbes are found in diverse habitats and have relationships with other organisms. Important bacterial genera include Escherichia, Lactobacillus, Streptococcus, and Clostridium. Viruses can cause diseases like hepatitis, smallpox, and the common cold. Fungi include yeasts and molds and are found worldwide in various environments. Yeasts are used to produce alcoholic beverages and leaven baked goods.

microbial diversity & redundancyhabitat of bacteriaimportant genera & species in bacteriology
Bioleaching
BioleachingBioleaching
Bioleaching

This document provides an overview of bioleaching and discusses its applications in extracting various metals. Bioleaching employs bacteria to convert insoluble metal sulfides into water-soluble metal sulfates. The key microorganisms involved are mesophilic and thermophilic bacteria that oxidize ferrous iron and sulfur. The bioleaching process involves providing bacteria with metal ores or concentrates, oxygen, nutrients, and maintaining optimal temperature and pH. Factors like mineral composition, surface area, and leaching method affect bioleaching. It allows extraction of metals from low-grade ores and has advantages of being cheaper and more environmentally friendly compared to conventional methods. Gold, uranium, and copper are some metals extracted via bio

• https://jb.asm.org/content/199/15/e00883-16
• https://onlinelibrary.wiley.com/doi/pdf/10.1111
/j.1541-4337.2004.tb00057.x
• https://academic.oup.com/femsre/article/42/3/3
53/4909803
• Prescott Microbiology

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Adaptation of microorganism in environment- microbial ecology

  • 2. • Microbial symbiotic associations, which are pervasive, can be beneficial (mutualistic), neutral (commensal), or harmful (pathogenic) to the host animal. • Within symbioses, microbes can exploit the host for space and nutrients or as a vector for dissemination to other environments. • Both within and between hosts, microbes experience changing environmental conditions to which they must adapt for optimal fitness and for maintenance of symbiotic associations. • SURVIVAL
  • 3. • Microorganisms are adapted for optimum functioning in their normal physiological environments. • Any extreme change in environmental conditions from the optimum inflicts a stress on an organism. • The extent of the change will determine whether the organism is killed, ceases growth, or has an increased lag time and reduced growth rate. • Most bacteria are able to tolerate small changes in an environmental parameter and can adapt over the time scale of minutes, hours, or days (Hill and others 1995). • Microorganisms do this by both yielding to the stress conditions and making suitable provisions for survival or attempting to resist the stress (Herbert 1989). For most organisms, this tolerance can be pushed to maximum limits if the cell is provided with sufficient opportunity to sense and adapt to the deteriorating environment.
  • 4. Microorganisms will produce proteins and enzymes to adapt to various environments • Entire groups of microorganisms such as psychrophiles, acidophiles, and halophiles have adapted their lifestyles to prefer these extreme environments. Psychrophiles are microorganisms that can grow at 0 °C and have an optimum growth temperature of 15 °C or less and a temperature maximum of around 20 °C. • Acidophiles are microorganisms that have their growth optimum between about pH 1.0 and 5.5, and halophiles are microorganisms that require high levels of sodium chloride for growth such as 2.8 molal and up to 6.2 molal for extreme halophiles. • Changes in environmental conditions away from the optimal value can cause the induction of many elaborate stress responses. • These strategies are generally directed at survival rather than growth.
  • 5. Extreme Environments • Microorganisms are found in a wide range of environments that differ in pH, temperature, atmospheric pressure, salinity, water availability, and ionizing radiation. • In some environments, these conditions can be at either end of a continuum (e.g., very alkaline or acidic; extremely hot or cold). Such environments are called extreme environments. • The microorganisms that survive in such environments are described as extremophiles. • Although extreme environments are usually considered to have decreased microbial diversity, as judged by the microorganisms that can be cultured, with the increased use of molecular detection techniques, it appears that many contain a surprising diversity of microorganisms. • Work to establish relationships between the microorganisms that can be observed and detected by molecular techniques and culturable microorganisms is ongoing. • Many microbial genera have specific requirements for survival in extreme environments. For example, a high sodium ion concentration is required to maintain membrane integrity in many halophilic procaryotes, including members of the genus Halobacterium. Halobacteria require a sodium ion concentration of at least 1.5 M, and about 3 to 4 M for optimum growth.
  • 6. • Microbial life at high salt concentrations is phylogenetically very diverse. Hypersaline environments with salt concentrations up to NaCl saturation are inhabited by halophilic and highly halotolerant representatives of all three domains of life: Archaea, Bacteria and Eukarya. • The mechanisms used by these salt-requiring or highly salt- tolerant microorganisms to withstand the high salt concentrations, and in many cases also to adapt their physiology to changes in the salt concentrations in their environments, are diverse as well. • Biological membranes are permeable to water. Therefore, water moves into and out of cells driven by differences in water activity between the cytoplasm and the outside medium.
  • 8. • To maintain a high osmotic pressure inside the cells, different strategies can be used, which are as follows: • The ‘salt-in’ strategy where osmotic balance is achieved by accumulating high concentrations of inorganic salts in the medium. As Na+ ions are excluded as much as possible from cells in all three domains of life, the ‘salt-in’ strategy is based on KCl rather than on NaCl as the main intracellular salt.